RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 IGLV10-54A0A075B6I4 117 aa13.69□□□□□ -0.22
RARA-201ENST00000254066 JMJD1CQ15652 2540 aa13.68□□□□□ -0.22
RARA-201ENST00000254066 HIGD2AQ9BW72 106 aa13.68□□□□□ -0.22
RARA-201ENST00000254066 ANK3Q12955 4377 aaKnown RBP13.68□□□□□ -0.22
RARA-201ENST00000254066 A0A1B0GW54 56 aa13.67□□□□□ -0.22
RARA-201ENST00000254066 MDFIQ99750 246 aa13.67□□□□□ -0.22
RARA-201ENST00000254066 WFDC10AQ9H1F0 79 aa13.67□□□□□ -0.22
RARA-201ENST00000254066 SONP18583 2426 aaKnown RBP13.66□□□□□ -0.22
RARA-201ENST00000254066 IGLV1-51P01701 117 aa13.65□□□□□ -0.22
RARA-201ENST00000254066 HIGD2BQ4VC39 106 aa13.65□□□□□ -0.22
RARA-201ENST00000254066 Q8N9L7 120 aa13.65□□□□□ -0.22
RARA-201ENST00000254066 LYRM9A8MSI8 78 aa13.65□□□□□ -0.22
RARA-201ENST00000254066 LINC00528Q8N1L1 170 aa13.62□□□□□ -0.23
RARA-201ENST00000254066 NDUFS5O43920 106 aa13.62□□□□□ -0.23
RARA-201ENST00000254066 M0R378 163 aa13.61□□□□□ -0.23
RARA-201ENST00000254066 A0A096LPF7 62 aa13.6□□□□□ -0.23
RARA-201ENST00000254066 LINC00588Q9Y4M8 146 aa13.59□□□□□ -0.23
RARA-201ENST00000254066 C6orf48Q9UBA6 75 aa13.58□□□□□ -0.24
RARA-201ENST00000254066 VPREB1P12018 145 aa13.58□□□□□ -0.24
RARA-201ENST00000254066 NOTCH3Q9UM47 2321 aa13.57□□□□□ -0.24
RARA-201ENST00000254066 Q6ZRP5 223 aa13.56□□□□□ -0.24
RARA-201ENST00000254066 UBE2BP63146 152 aa13.56□□□□□ -0.24
RARA-201ENST00000254066 ZCCHC13Q8WW36 166 aaKnown RBP13.56□□□□□ -0.24
RARA-201ENST00000254066 PRR34Q9NV39 138 aa13.56□□□□□ -0.24
RARA-201ENST00000254066 C1orf64Q8NEQ6 169 aa13.55□□□□□ -0.24
RARA-201ENST00000254066 XAGE1AQ9HD64 81 aa13.55□□□□□ -0.24
RARA-201ENST00000254066 ATRQ13535 2644 aa13.55□□□□□ -0.24
RARA-201ENST00000254066 CYP4F30PQ9H0H9 118 aa13.54□□□□□ -0.24
RARA-201ENST00000254066 C8orf87E5RJ46 101 aa13.54□□□□□ -0.24
RARA-201ENST00000254066 SMIM29Q86T20 159 aa13.54□□□□□ -0.24
RARA-201ENST00000254066 IGLV5-48A0A075B6I7 105 aa13.53□□□□□ -0.24
RARA-201ENST00000254066 KRTAP24-1Q3LI83 254 aa13.53□□□□□ -0.24
RARA-201ENST00000254066 X6R8D5 127 aa13.52□□□□□ -0.24
RARA-201ENST00000254066 KLK12Q9UKR0 248 aa13.52□□□□□ -0.25
RARA-201ENST00000254066 FBN1P35555 2871 aaKnown RBP13.51□□□□□ -0.25
RARA-201ENST00000254066 FAM30AQ9NZY2 134 aa13.51□□□□□ -0.25
RARA-201ENST00000254066 COL6A5A8TX70 2615 aa13.51□□□□□ -0.25
RARA-201ENST00000254066 WNK1Q9H4A3 2382 aa13.5□□□□□ -0.25
RARA-201ENST00000254066 LELP1Q5T871 98 aa13.5□□□□□ -0.25
RARA-201ENST00000254066 PHF5AQ7RTV0 110 aaKnown RBP13.5□□□□□ -0.25
RARA-201ENST00000254066 DNHD1Q96M86 4753 aa13.49□□□□□ -0.25
RARA-201ENST00000254066 C3orf84H3BNL1 204 aa13.49□□□□□ -0.25
RARA-201ENST00000254066 MXRA5Q9NR99 2828 aa13.49□□□□□ -0.25
RARA-201ENST00000254066 ETDCA0A1B0GVM5 59 aa13.48□□□□□ -0.25
RARA-201ENST00000254066 EGFEM1PQ0D2K5 195 aa13.48□□□□□ -0.25
RARA-201ENST00000254066 KPRPQ5T749 579 aaPredicted RBP13.47□□□□□ -0.25
RARA-201ENST00000254066 DNAJC9-AS1A6NH13 148 aa13.45□□□□□ -0.26
RARA-201ENST00000254066 TRAV22A0A0B4J277 110 aa13.44□□□□□ -0.26
RARA-201ENST00000254066 NDUFB1O75438 58 aa13.43□□□□□ -0.26
RARA-201ENST00000254066 CUBNO60494 3623 aa13.43□□□□□ -0.26
RARA-201ENST00000254066 Q8N377 158 aa13.42□□□□□ -0.26
RARA-201ENST00000254066 CAMK2N2Q96S95 79 aa13.41□□□□□ -0.26
RARA-201ENST00000254066 LRCOL1A6NCL2 159 aa13.4□□□□□ -0.26
RARA-201ENST00000254066 SYCNQ0VAF6 134 aa13.4□□□□□ -0.26
RARA-201ENST00000254066 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.39□□□□□ -0.27
RARA-201ENST00000254066 KCNQ1DNQ9H478 68 aa13.39□□□□□ -0.27
RARA-201ENST00000254066 PSCAO43653 123 aa13.39□□□□□ -0.27
RARA-201ENST00000254066 STAB1Q9NY15 2570 aa13.38□□□□□ -0.27
RARA-201ENST00000254066 A0A1W2PNM2 257 aa13.37□□□□□ -0.27
RARA-201ENST00000254066 PSPHP1O15172 72 aa13.37□□□□□ -0.27
RARA-201ENST00000254066 SPRR4Q96PI1 79 aa13.37□□□□□ -0.27
RARA-201ENST00000254066 ATP11AUNQ6ZP68 121 aa13.36□□□□□ -0.27
RARA-201ENST00000254066 Q8NBF4 154 aa13.36□□□□□ -0.27
RARA-201ENST00000254066 PRR26Q8N8Z3 221 aa13.35□□□□□ -0.27
RARA-201ENST00000254066 DHRS4-AS1Q9P1J3 65 aa13.35□□□□□ -0.27
RARA-201ENST00000254066 TNP2Q05952 138 aa13.35□□□□□ -0.27
RARA-201ENST00000254066 DSCR10P59022 87 aa13.34□□□□□ -0.27
RARA-201ENST00000254066 UBE2AP49459 152 aa13.34□□□□□ -0.27
RARA-201ENST00000254066 LCA10Q71F78 164 aa13.34□□□□□ -0.27
RARA-201ENST00000254066 FBN3Q75N90 2809 aa13.33□□□□□ -0.28
RARA-201ENST00000254066 C1orf137Q5JT78 98 aa13.32□□□□□ -0.28
RARA-201ENST00000254066 DEFB105AQ8NG35 78 aa13.32□□□□□ -0.28
RARA-201ENST00000254066 C7orf65Q6ZTY9 151 aa13.31□□□□□ -0.28
RARA-201ENST00000254066 HCG22E2RYF7 251 aa13.3□□□□□ -0.28
RARA-201ENST00000254066 A6NN06 94 aa13.29□□□□□ -0.28
RARA-201ENST00000254066 K7EQZ3 153 aa13.28□□□□□ -0.28
RARA-201ENST00000254066 A8MUN3 132 aa13.27□□□□□ -0.29
RARA-201ENST00000254066 KRTAP26-1Q6PEX3 210 aa13.27□□□□□ -0.29
RARA-201ENST00000254066 NKAPP1Q8N9T2 125 aa13.26□□□□□ -0.29
RARA-201ENST00000254066 SPANXA2-OT1Q8N9U9 137 aa13.26□□□□□ -0.29
RARA-201ENST00000254066 ST20-AS1Q8NBB2 130 aa13.26□□□□□ -0.29
RARA-201ENST00000254066 ANK2Q01484 3957 aa13.26□□□□□ -0.29
RARA-201ENST00000254066 MP68P56378 58 aa13.25□□□□□ -0.29
RARA-201ENST00000254066 Q5VV11 94 aa13.25□□□□□ -0.29
RARA-201ENST00000254066 Q6ZRX8 168 aa13.25□□□□□ -0.29
RARA-201ENST00000254066 LIMD2Q9BT23 127 aa13.25□□□□□ -0.29
RARA-201ENST00000254066 C16orf90A8MZG2 172 aa13.24□□□□□ -0.29
RARA-201ENST00000254066 B9D2Q9BPU9 175 aa13.24□□□□□ -0.29
RARA-201ENST00000254066 C15orf56Q8N910 161 aa13.24□□□□□ -0.29
RARA-201ENST00000254066 H3BPC8 53 aa13.22□□□□□ -0.29
RARA-201ENST00000254066 DEFB4AO15263 64 aa13.22□□□□□ -0.29
RARA-201ENST00000254066 SPART-AS1P0CW21 52 aa13.22□□□□□ -0.29
RARA-201ENST00000254066 C7orf33Q8WU49 177 aa13.22□□□□□ -0.29
RARA-201ENST00000254066 PLA2G2DQ9UNK4 145 aa13.22□□□□□ -0.29
RARA-201ENST00000254066 A8MU10 97 aa13.21□□□□□ -0.3
RARA-201ENST00000254066 KRTAP4-16G5E9R7 235 aaPredicted RBP13.2□□□□□ -0.3
RARA-201ENST00000254066 DEFB135Q30KP9 77 aa13.2□□□□□ -0.3
RARA-201ENST00000254066 Q9BRP9 147 aa13.2□□□□□ -0.3
RARA-201ENST00000254066 Q8NAQ8 132 aa13.2□□□□□ -0.3
RARA-201ENST00000254066 SPTSSBQ8NFR3 76 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms