RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 FLNAP21333 2647 aaKnown RBP2.87□□□□□ -1.95
UBE4A-201ENST00000252108 ZNF73O43830 326 aaPredicted RBP2.87□□□□□ -1.95
UBE4A-201ENST00000252108 LRRK2Q5S007 2527 aa2.87□□□□□ -1.95
UBE4A-201ENST00000252108 MP68P56378 58 aa2.87□□□□□ -1.95
UBE4A-201ENST00000252108 EPG5Q9HCE0 2579 aa2.87□□□□□ -1.95
UBE4A-201ENST00000252108 A0A087WVE0 104 aa2.86□□□□□ -1.95
UBE4A-201ENST00000252108 IGHV4-30-4P0DP06 118 aa2.86□□□□□ -1.95
UBE4A-201ENST00000252108 NANOS2P60321 138 aaKnown RBP2.86□□□□□ -1.95
UBE4A-201ENST00000252108 NBASA2RRP1 2371 aa2.86□□□□□ -1.95
UBE4A-201ENST00000252108 GCN1Q92616 2671 aaKnown RBP2.86□□□□□ -1.95
UBE4A-201ENST00000252108 MPLKIPQ8TAP9 179 aa2.86□□□□□ -1.95
UBE4A-201ENST00000252108 SPATA3Q8NHX4 192 aa2.86□□□□□ -1.95
UBE4A-201ENST00000252108 LOC100131303A0A0U1RQF7 123 aa2.85□□□□□ -1.95
UBE4A-201ENST00000252108 CIRBP-AS1Q8TBR5 109 aa2.85□□□□□ -1.95
UBE4A-201ENST00000252108 ZFYVE26Q68DK2 2539 aa2.85□□□□□ -1.95
UBE4A-201ENST00000252108 PTPN13Q12923 2485 aa2.85□□□□□ -1.95
UBE4A-201ENST00000252108 Q8N3U1 123 aa2.85□□□□□ -1.95
UBE4A-201ENST00000252108 PRM2P04554 102 aa2.85□□□□□ -1.95
UBE4A-201ENST00000252108 TMEM254Q8TBM7 123 aa2.85□□□□□ -1.95
UBE4A-201ENST00000252108 DNAH10Q8IVF4 4471 aa2.85□□□□□ -1.95
UBE4A-201ENST00000252108 ABCA12Q86UK0 2595 aa2.84□□□□□ -1.95
UBE4A-201ENST00000252108 IGLV9-49A0A0B4J1Y8 123 aa2.84□□□□□ -1.95
UBE4A-201ENST00000252108 CYSRT1A8MQ03 144 aa2.84□□□□□ -1.95
UBE4A-201ENST00000252108 IGLV6-57P01721 117 aa2.84□□□□□ -1.95
UBE4A-201ENST00000252108 LINC01006Q8NI28 216 aa2.84□□□□□ -1.95
UBE4A-201ENST00000252108 H3BNG1 76 aa2.84□□□□□ -1.96
UBE4A-201ENST00000252108 RPL37AP8A6NKH3 93 aa2.84□□□□□ -1.96
UBE4A-201ENST00000252108 ELOF1P60002 83 aaKnown RBP2.84□□□□□ -1.96
UBE4A-201ENST00000252108 C1orf137Q5JT78 98 aa2.83□□□□□ -1.96
UBE4A-201ENST00000252108 PKD1L1Q8TDX9 2849 aa2.83□□□□□ -1.96
UBE4A-201ENST00000252108 ACACBO00763 2458 aa2.83□□□□□ -1.96
UBE4A-201ENST00000252108 ESRGQ1W209 222 aa2.83□□□□□ -1.96
UBE4A-201ENST00000252108 H3BPC8 53 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 KIAA0087Q14695 138 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 SYCNQ0VAF6 134 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 UNQ6190/PRO20217Q6UXQ8 127 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 SPTSSBQ8NFR3 76 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 TRBV7-4A0A0J9YYF1 115 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 EPM2AB3EWF7 344 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 SNURFQ9Y675 71 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 HELZ2Q9BYK8 2649 aaKnown RBP2.82□□□□□ -1.96
UBE4A-201ENST00000252108 H7BZZ5 65 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 FBN1P35555 2871 aaKnown RBP2.82□□□□□ -1.96
UBE4A-201ENST00000252108 DNAH6Q9C0G6 4158 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 HECTD4Q9Y4D8 3996 aa2.82□□□□□ -1.96
UBE4A-201ENST00000252108 WFDC9Q8NEX5 89 aa2.81□□□□□ -1.96
UBE4A-201ENST00000252108 CSPG4Q6UVK1 2322 aa2.81□□□□□ -1.96
UBE4A-201ENST00000252108 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
UBE4A-201ENST00000252108 LINC01556Q5JQF7 62 aa2.81□□□□□ -1.96
UBE4A-201ENST00000252108 COL7A1Q02388 2944 aa2.81□□□□□ -1.96
UBE4A-201ENST00000252108 KPRPQ5T749 579 aaPredicted RBP2.81□□□□□ -1.96
UBE4A-201ENST00000252108 LIMD2Q9BT23 127 aa2.81□□□□□ -1.96
UBE4A-201ENST00000252108 RPL37AP61513 92 aaKnown RBP2.81□□□□□ -1.96
UBE4A-201ENST00000252108 DNAH17Q9UFH2 4485 aa2.8□□□□□ -1.96
UBE4A-201ENST00000252108 hDV103S1A0JD37 113 aa2.8□□□□□ -1.96
UBE4A-201ENST00000252108 PLECQ15149 4684 aaKnown RBP2.8□□□□□ -1.96
UBE4A-201ENST00000252108 PRR34Q9NV39 138 aa2.8□□□□□ -1.96
UBE4A-201ENST00000252108 DNAH2Q9P225 4427 aa2.8□□□□□ -1.96
UBE4A-201ENST00000252108 PRR3P79522 188 aaKnown RBP2.8□□□□□ -1.96
UBE4A-201ENST00000252108 XAGE1AQ9HD64 81 aa2.8□□□□□ -1.96
UBE4A-201ENST00000252108 NAV2Q8IVL1 2488 aa2.79□□□□□ -1.96
UBE4A-201ENST00000252108 SCXQ7RTU7 201 aa2.79□□□□□ -1.96
UBE4A-201ENST00000252108 TEP1Q99973 2627 aaKnown RBP2.79□□□□□ -1.96
UBE4A-201ENST00000252108 FRAS1Q86XX4 4008 aa2.79□□□□□ -1.96
UBE4A-201ENST00000252108 SPG11Q96JI7 2443 aa2.79□□□□□ -1.96
UBE4A-201ENST00000252108 C9orf116Q5BN46 136 aaPredicted RBP2.79□□□□□ -1.96
UBE4A-201ENST00000252108 PLA2G2DQ9UNK4 145 aa2.79□□□□□ -1.96
UBE4A-201ENST00000252108 FBN3Q75N90 2809 aa2.79□□□□□ -1.96
UBE4A-201ENST00000252108 RETNLBQ9BQ08 111 aa2.79□□□□□ -1.96
UBE4A-201ENST00000252108 WFDC10AQ9H1F0 79 aa2.79□□□□□ -1.96
UBE4A-201ENST00000252108 BAHCC1Q9P281 2608 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 HCG22E2RYF7 251 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 KRTAP26-1Q6PEX3 210 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 C6orf48Q9UBA6 75 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 TENM3Q9P273 2699 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 SERTAD4-AS1Q5TG53 156 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 LINC00528Q8N1L1 170 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 HIVEP2P31629 2446 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 SORL1Q92673 2214 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 MAST4O15021 2626 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 STARD9Q9P2P6 4700 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 MYO9AB2RTY4 2548 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 Q8NBF4 154 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 Q8NDZ9 215 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 ATP11AUNQ6ZP68 121 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 CELA1Q9UNI1 258 aa2.78□□□□□ -1.96
UBE4A-201ENST00000252108 LINC00336Q6ZUF6 198 aa2.77□□□□□ -1.97
UBE4A-201ENST00000252108 C9orf129Q5T035 196 aaKnown RBP2.77□□□□□ -1.97
UBE4A-201ENST00000252108 KCNQ1DNQ9H478 68 aa2.77□□□□□ -1.97
UBE4A-201ENST00000252108 Q5XG85 94 aa2.77□□□□□ -1.97
UBE4A-201ENST00000252108 TM2D3Q9BRN9 247 aa2.77□□□□□ -1.97
UBE4A-201ENST00000252108 FAM208BQ5VWN6 2430 aa2.76□□□□□ -1.97
UBE4A-201ENST00000252108 TLX1NBP0CAT3 122 aa2.76□□□□□ -1.97
UBE4A-201ENST00000252108 DNAH8Q96JB1 4490 aa2.76□□□□□ -1.97
UBE4A-201ENST00000252108 KRTAP24-1Q3LI83 254 aa2.76□□□□□ -1.97
UBE4A-201ENST00000252108 C10orf25Q5T742 122 aa2.76□□□□□ -1.97
UBE4A-201ENST00000252108 Q6ZRU5 148 aa2.76□□□□□ -1.97
UBE4A-201ENST00000252108 IGLV5-48A0A075B6I7 105 aa2.76□□□□□ -1.97
UBE4A-201ENST00000252108 Q6ZRX8 168 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms