RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.44
PTPN12-201ENST00000248594 NBEAL1Q6ZS30 2694 aa12.26□□□□□ -0.45
PTPN12-201ENST00000248594 IGLV6-57P01721 117 aa12.26□□□□□ -0.45
PTPN12-201ENST00000248594 Q6YL49 198 aa12.25□□□□□ -0.45
PTPN12-201ENST00000248594 TRRAPQ9Y4A5 3859 aa12.24□□□□□ -0.45
PTPN12-201ENST00000248594 IGHV4-31P0DP07 118 aa12.24□□□□□ -0.45
PTPN12-201ENST00000248594 NOTCH1P46531 2555 aa12.23□□□□□ -0.45
PTPN12-201ENST00000248594 ST20-AS1Q8NBB2 130 aa12.23□□□□□ -0.45
PTPN12-201ENST00000248594 ERC2-IT1O76042 136 aa12.22□□□□□ -0.45
PTPN12-201ENST00000248594 WFDC13Q8IUB5 93 aa12.22□□□□□ -0.45
PTPN12-201ENST00000248594 C11orf45Q8TAV5 145 aa12.21□□□□□ -0.45
PTPN12-201ENST00000248594 Q6ZRU5 148 aa12.21□□□□□ -0.46
PTPN12-201ENST00000248594 FLNBO75369 2602 aaKnown RBP12.2□□□□□ -0.46
PTPN12-201ENST00000248594 PRO0255Q9UI72 69 aa12.2□□□□□ -0.46
PTPN12-201ENST00000248594 TENM4Q6N022 2769 aa12.2□□□□□ -0.46
PTPN12-201ENST00000248594 A0A1B0GUV1 79 aa12.2□□□□□ -0.46
PTPN12-201ENST00000248594 CAMK2N2Q96S95 79 aa12.19□□□□□ -0.46
PTPN12-201ENST00000248594 C6orf48Q9UBA6 75 aa12.18□□□□□ -0.46
PTPN12-201ENST00000248594 A0A0G2JQZ4 141 aa12.18□□□□□ -0.46
PTPN12-201ENST00000248594 A0A1W2PNN7 141 aa12.18□□□□□ -0.46
PTPN12-201ENST00000248594 PRR15LQ9BU68 103 aa12.17□□□□□ -0.46
PTPN12-201ENST00000248594 J3QKU1 62 aa12.17□□□□□ -0.46
PTPN12-201ENST00000248594 ELOF1P60002 83 aaKnown RBP12.16□□□□□ -0.46
PTPN12-201ENST00000248594 WFDC10BQ8IUB3 73 aa12.16□□□□□ -0.46
PTPN12-201ENST00000248594 RBM12B-AS1Q9P1G2 102 aa12.16□□□□□ -0.46
PTPN12-201ENST00000248594 DNAJC9-AS1A6NH13 148 aa12.16□□□□□ -0.46
PTPN12-201ENST00000248594 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.15□□□□□ -0.46
PTPN12-201ENST00000248594 MAST4O15021 2626 aa12.15□□□□□ -0.46
PTPN12-201ENST00000248594 FBN1P35555 2871 aaKnown RBP12.15□□□□□ -0.46
PTPN12-201ENST00000248594 SYCNQ0VAF6 134 aa12.15□□□□□ -0.46
PTPN12-201ENST00000248594 A0A0J9YWU9 116 aa12.15□□□□□ -0.46
PTPN12-201ENST00000248594 Q1T7F1 81 aa12.14□□□□□ -0.47
PTPN12-201ENST00000248594 K7EQZ3 153 aa12.14□□□□□ -0.47
PTPN12-201ENST00000248594 LINC00208Q96KT6 92 aa12.13□□□□□ -0.47
PTPN12-201ENST00000248594 ETDCA0A1B0GVM5 59 aa12.13□□□□□ -0.47
PTPN12-201ENST00000248594 OTOGQ6ZRI0 2925 aa12.12□□□□□ -0.47
PTPN12-201ENST00000248594 SMR3AQ99954 134 aa12.12□□□□□ -0.47
PTPN12-201ENST00000248594 KPRPQ5T749 579 aaPredicted RBP12.12□□□□□ -0.47
PTPN12-201ENST00000248594 A6NED7 52 aa12.11□□□□□ -0.47
PTPN12-201ENST00000248594 PSCAO43653 123 aa12.11□□□□□ -0.47
PTPN12-201ENST00000248594 RPL37AP8A6NKH3 93 aa12.11□□□□□ -0.47
PTPN12-201ENST00000248594 COL6A5A8TX70 2615 aa12.11□□□□□ -0.47
PTPN12-201ENST00000248594 H3BQ85 93 aa12.1□□□□□ -0.47
PTPN12-201ENST00000248594 DEFB135Q30KP9 77 aa12.09□□□□□ -0.47
PTPN12-201ENST00000248594 CSNK1G2-AS1Q8NCQ2 148 aa12.09□□□□□ -0.47
PTPN12-201ENST00000248594 M0R378 163 aa12.07□□□□□ -0.48
PTPN12-201ENST00000248594 UBE2BP63146 152 aa12.07□□□□□ -0.48
PTPN12-201ENST00000248594 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
PTPN12-201ENST00000248594 HCG22E2RYF7 251 aa12.06□□□□□ -0.48
PTPN12-201ENST00000248594 LINC00528Q8N1L1 170 aa12.06□□□□□ -0.48
PTPN12-201ENST00000248594 NKAPP1Q8N9T2 125 aa12.06□□□□□ -0.48
PTPN12-201ENST00000248594 STAB1Q9NY15 2570 aa12.05□□□□□ -0.48
PTPN12-201ENST00000248594 IGHV4-30-4P0DP06 118 aa12.05□□□□□ -0.48
PTPN12-201ENST00000248594 VPREB1P12018 145 aa12.05□□□□□ -0.48
PTPN12-201ENST00000248594 Q5VV11 94 aa12.05□□□□□ -0.48
PTPN12-201ENST00000248594 A0A1W2PNM2 257 aa12.04□□□□□ -0.48
PTPN12-201ENST00000248594 APOC4P55056 127 aa12.04□□□□□ -0.48
PTPN12-201ENST00000248594 FSHBP01225 129 aa12.04□□□□□ -0.48
PTPN12-201ENST00000248594 Q8N377 158 aa12.04□□□□□ -0.48
PTPN12-201ENST00000248594 MP68P56378 58 aa12.04□□□□□ -0.48
PTPN12-201ENST00000248594 C16orf90A8MZG2 172 aa12.03□□□□□ -0.48
PTPN12-201ENST00000248594 B9D2Q9BPU9 175 aa12.03□□□□□ -0.48
PTPN12-201ENST00000248594 DEFB113Q30KQ7 82 aa12.02□□□□□ -0.48
PTPN12-201ENST00000248594 H3BS24 57 aa12.02□□□□□ -0.49
PTPN12-201ENST00000248594 UBE2AP49459 152 aa12.01□□□□□ -0.49
PTPN12-201ENST00000248594 DSCR9P59020 149 aa12.01□□□□□ -0.49
PTPN12-201ENST00000248594 CSMD3Q7Z407 3707 aa12□□□□□ -0.49
PTPN12-201ENST00000248594 RPL37AP61513 92 aaKnown RBP12□□□□□ -0.49
PTPN12-201ENST00000248594 C19orf73Q9NVV2 129 aa11.99□□□□□ -0.49
PTPN12-201ENST00000248594 DSCR10P59022 87 aa11.98□□□□□ -0.49
PTPN12-201ENST00000248594 KTN1-AS1Q86SY8 53 aa11.98□□□□□ -0.49
PTPN12-201ENST00000248594 TENM3Q9P273 2699 aa11.97□□□□□ -0.49
PTPN12-201ENST00000248594 LINC00588Q9Y4M8 146 aa11.95□□□□□ -0.5
PTPN12-201ENST00000248594 CMC4P56277 68 aaPredicted RBP11.94□□□□□ -0.5
PTPN12-201ENST00000248594 X6R8D5 127 aa11.93□□□□□ -0.5
PTPN12-201ENST00000248594 IGLV1-51P01701 117 aa11.93□□□□□ -0.5
PTPN12-201ENST00000248594 IGKV2D-24A0A075B6R9 120 aa11.93□□□□□ -0.5
PTPN12-201ENST00000248594 ZCCHC13Q8WW36 166 aaKnown RBP11.92□□□□□ -0.5
PTPN12-201ENST00000248594 NSD1Q96L73 2696 aaPredicted RBP11.91□□□□□ -0.5
PTPN12-201ENST00000248594 SERTAD4-AS1Q5TG53 156 aa11.91□□□□□ -0.5
PTPN12-201ENST00000248594 PCOTHQ58A44 107 aa11.91□□□□□ -0.5
PTPN12-201ENST00000248594 C7orf33Q8WU49 177 aa11.91□□□□□ -0.5
PTPN12-201ENST00000248594 Q8N9P0 234 aaPredicted RBP11.9□□□□□ -0.5
PTPN12-201ENST00000248594 LCA10Q71F78 164 aa11.9□□□□□ -0.5
PTPN12-201ENST00000248594 Q8NBF4 154 aa11.9□□□□□ -0.5
PTPN12-201ENST00000248594 MGAM2Q2M2H8 2515 aa11.9□□□□□ -0.51
PTPN12-201ENST00000248594 H0Y9P7 68 aa11.89□□□□□ -0.51
PTPN12-201ENST00000248594 NDUFB1O75438 58 aa11.89□□□□□ -0.51
PTPN12-201ENST00000248594 A0A087WSZ3 146 aa11.88□□□□□ -0.51
PTPN12-201ENST00000248594 SPAG11AQ6PDA7 123 aa11.88□□□□□ -0.51
PTPN12-201ENST00000248594 FAM168BA1KXE4 195 aa11.88□□□□□ -0.51
PTPN12-201ENST00000248594 A0A096LNI7 61 aa11.87□□□□□ -0.51
PTPN12-201ENST00000248594 LELP1Q5T871 98 aa11.87□□□□□ -0.51
PTPN12-201ENST00000248594 CYP4F30PQ9H0H9 118 aa11.86□□□□□ -0.51
PTPN12-201ENST00000248594 EGFEM1PQ0D2K5 195 aa11.86□□□□□ -0.51
PTPN12-201ENST00000248594 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
PTPN12-201ENST00000248594 LIMD2Q9BT23 127 aa11.85□□□□□ -0.51
PTPN12-201ENST00000248594 IGLV5-48A0A075B6I7 105 aa11.83□□□□□ -0.52
PTPN12-201ENST00000248594 GVQW2A0A096LPI5 108 aaPredicted RBP11.83□□□□□ -0.52
PTPN12-201ENST00000248594 Q9BRP9 147 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms