RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 TRAV22A0A0B4J277 110 aa13.37□□□□□ -0.27
HOXC13-201ENST00000243056 LOC100131303A0A0U1RQF7 123 aa13.36□□□□□ -0.27
HOXC13-201ENST00000243056 DEFB130BP0DP73 79 aa13.35□□□□□ -0.27
HOXC13-201ENST00000243056 DEFB130AP0DP74 79 aa13.35□□□□□ -0.27
HOXC13-201ENST00000243056 APOC4P55056 127 aa13.34□□□□□ -0.27
HOXC13-201ENST00000243056 MRPL55Q7Z7F7 128 aaKnown RBP13.34□□□□□ -0.27
HOXC13-201ENST00000243056 COL7A1Q02388 2944 aa13.33□□□□□ -0.28
HOXC13-201ENST00000243056 C16orf74Q96GX8 76 aa13.33□□□□□ -0.28
HOXC13-201ENST00000243056 RBM12B-AS1Q9P1G2 102 aa13.32□□□□□ -0.28
HOXC13-201ENST00000243056 TRGV2A0A075B6R0 118 aa13.31□□□□□ -0.28
HOXC13-201ENST00000243056 IGHV4-28A0A0C4DH34 117 aa13.31□□□□□ -0.28
HOXC13-201ENST00000243056 LINC00612Q8N6U2 182 aa13.3□□□□□ -0.28
HOXC13-201ENST00000243056 K7EIL1 84 aa13.3□□□□□ -0.28
HOXC13-201ENST00000243056 LINC00959A0A1B0GUT2 108 aa13.29□□□□□ -0.28
HOXC13-201ENST00000243056 Q8IZM0 81 aa13.29□□□□□ -0.28
HOXC13-201ENST00000243056 CELA1Q9UNI1 258 aa13.29□□□□□ -0.28
HOXC13-201ENST00000243056 A8MUN3 132 aa13.28□□□□□ -0.28
HOXC13-201ENST00000243056 SYCNQ0VAF6 134 aa13.28□□□□□ -0.28
HOXC13-201ENST00000243056 C9orf116Q5BN46 136 aaPredicted RBP13.28□□□□□ -0.28
HOXC13-201ENST00000243056 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.27□□□□□ -0.29
HOXC13-201ENST00000243056 Q8NAQ8 132 aa13.27□□□□□ -0.29
HOXC13-201ENST00000243056 FAM30AQ9NZY2 134 aa13.26□□□□□ -0.29
HOXC13-201ENST00000243056 KTN1-AS1Q86SY8 53 aa13.25□□□□□ -0.29
HOXC13-201ENST00000243056 C10orf25Q5T742 122 aa13.25□□□□□ -0.29
HOXC13-201ENST00000243056 MEGF8Q7Z7M0 2845 aa13.25□□□□□ -0.29
HOXC13-201ENST00000243056 LINC00588Q9Y4M8 146 aa13.24□□□□□ -0.29
HOXC13-201ENST00000243056 TRBV6-8A0A0A6YYG3 113 aa13.22□□□□□ -0.29
HOXC13-201ENST00000243056 HUWE1Q7Z6Z7 4374 aaKnown RBP13.22□□□□□ -0.29
HOXC13-201ENST00000243056 STAB2Q8WWQ8 2551 aa13.21□□□□□ -0.29
HOXC13-201ENST00000243056 SMIM29Q86T20 159 aa13.21□□□□□ -0.29
HOXC13-201ENST00000243056 LCE6AA0A183 80 aa13.21□□□□□ -0.3
HOXC13-201ENST00000243056 PSCAO43653 123 aa13.21□□□□□ -0.3
HOXC13-201ENST00000243056 COX7BP24311 80 aa13.21□□□□□ -0.3
HOXC13-201ENST00000243056 Q5VV11 94 aa13.21□□□□□ -0.3
HOXC13-201ENST00000243056 TRGV4A0A0C4DH28 118 aa13.2□□□□□ -0.3
HOXC13-201ENST00000243056 KIAA0087Q14695 138 aa13.2□□□□□ -0.3
HOXC13-201ENST00000243056 HTN3P15516 51 aa13.19□□□□□ -0.3
HOXC13-201ENST00000243056 PRR4Q16378 134 aa13.19□□□□□ -0.3
HOXC13-201ENST00000243056 CLPSL2Q6UWE3 100 aa13.19□□□□□ -0.3
HOXC13-201ENST00000243056 COX17Q14061 63 aa13.19□□□□□ -0.3
HOXC13-201ENST00000243056 ZCCHC13Q8WW36 166 aaKnown RBP13.19□□□□□ -0.3
HOXC13-201ENST00000243056 PRKDCP78527 4128 aaKnown RBP13.18□□□□□ -0.3
HOXC13-201ENST00000243056 UBE2BP63146 152 aa13.18□□□□□ -0.3
HOXC13-201ENST00000243056 H3BQ85 93 aa13.18□□□□□ -0.3
HOXC13-201ENST00000243056 IGLV6-57P01721 117 aa13.17□□□□□ -0.3
HOXC13-201ENST00000243056 A0A096LPF7 62 aa13.16□□□□□ -0.3
HOXC13-201ENST00000243056 KPRPQ5T749 579 aaPredicted RBP13.16□□□□□ -0.3
HOXC13-201ENST00000243056 M0R378 163 aa13.15□□□□□ -0.3
HOXC13-201ENST00000243056 LINC00269Q8N2A0 174 aa13.15□□□□□ -0.3
HOXC13-201ENST00000243056 KLK12Q9UKR0 248 aa13.15□□□□□ -0.3
HOXC13-201ENST00000243056 A0A0J9YWU9 116 aa13.15□□□□□ -0.3
HOXC13-201ENST00000243056 C16orf90A8MZG2 172 aa13.14□□□□□ -0.31
HOXC13-201ENST00000243056 CYP4F30PQ9H0H9 118 aa13.13□□□□□ -0.31
HOXC13-201ENST00000243056 DNAH9Q9NYC9 4486 aa13.13□□□□□ -0.31
HOXC13-201ENST00000243056 LYRM9A8MSI8 78 aa13.11□□□□□ -0.31
HOXC13-201ENST00000243056 C3orf84H3BNL1 204 aa13.11□□□□□ -0.31
HOXC13-201ENST00000243056 SPART-AS1P0CW21 52 aa13.11□□□□□ -0.31
HOXC13-201ENST00000243056 DIRC1Q969H9 104 aa13.11□□□□□ -0.31
HOXC13-201ENST00000243056 C11orf45Q8TAV5 145 aa13.1□□□□□ -0.31
HOXC13-201ENST00000243056 C4orf48Q5BLP8 95 aa13.09□□□□□ -0.31
HOXC13-201ENST00000243056 GYPEP15421 78 aa13.09□□□□□ -0.31
HOXC13-201ENST00000243056 SPTSSBQ8NFR3 76 aa13.08□□□□□ -0.32
HOXC13-201ENST00000243056 UBE2AP49459 152 aa13.08□□□□□ -0.32
HOXC13-201ENST00000243056 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.07□□□□□ -0.32
HOXC13-201ENST00000243056 CHKB-CPT1BH3BT56 60 aa13.07□□□□□ -0.32
HOXC13-201ENST00000243056 ST20-AS1Q8NBB2 130 aa13.04□□□□□ -0.32
HOXC13-201ENST00000243056 PRO0255Q9UI72 69 aa13.04□□□□□ -0.32
HOXC13-201ENST00000243056 HIGD2BQ4VC39 106 aa13.03□□□□□ -0.32
HOXC13-201ENST00000243056 TGP01266 2768 aa13.03□□□□□ -0.32
HOXC13-201ENST00000243056 TENM2Q9NT68 2774 aa13.03□□□□□ -0.32
HOXC13-201ENST00000243056 ZNF73O43830 326 aaPredicted RBP13.02□□□□□ -0.32
HOXC13-201ENST00000243056 ELOF1P60002 83 aaKnown RBP13.02□□□□□ -0.32
HOXC13-201ENST00000243056 A6NN06 94 aa13.02□□□□□ -0.33
HOXC13-201ENST00000243056 HCG22E2RYF7 251 aa13.02□□□□□ -0.33
HOXC13-201ENST00000243056 UNQ6190/PRO20217Q6UXQ8 127 aa13.02□□□□□ -0.33
HOXC13-201ENST00000243056 LCA10Q71F78 164 aa13.02□□□□□ -0.33
HOXC13-201ENST00000243056 LYSTQ99698 3801 aa13.02□□□□□ -0.33
HOXC13-201ENST00000243056 IGLV10-54A0A075B6I4 117 aa13.01□□□□□ -0.33
HOXC13-201ENST00000243056 FBN3Q75N90 2809 aa13□□□□□ -0.33
HOXC13-201ENST00000243056 ETDCA0A1B0GVM5 59 aa13□□□□□ -0.33
HOXC13-201ENST00000243056 NDUFS5O43920 106 aa12.99□□□□□ -0.33
HOXC13-201ENST00000243056 CSMD3Q7Z407 3707 aa12.98□□□□□ -0.33
HOXC13-201ENST00000243056 Q8N9P0 234 aaPredicted RBP12.98□□□□□ -0.33
HOXC13-201ENST00000243056 CHCHD10Q8WYQ3 142 aaPredicted RBP12.98□□□□□ -0.33
HOXC13-201ENST00000243056 A0A1B0GUV1 79 aa12.98□□□□□ -0.33
HOXC13-201ENST00000243056 PHF5AQ7RTV0 110 aaKnown RBP12.97□□□□□ -0.33
HOXC13-201ENST00000243056 PRR15LQ9BU68 103 aa12.97□□□□□ -0.33
HOXC13-201ENST00000243056 ATP11AUNQ6ZP68 121 aa12.97□□□□□ -0.33
HOXC13-201ENST00000243056 DEFB131BA0A096LNP1 70 aa12.93□□□□□ -0.34
HOXC13-201ENST00000243056 XAGE1AQ9HD64 81 aa12.93□□□□□ -0.34
HOXC13-201ENST00000243056 B9D2Q9BPU9 175 aa12.92□□□□□ -0.34
HOXC13-201ENST00000243056 SPAG11BQ08648 103 aa12.91□□□□□ -0.34
HOXC13-201ENST00000243056 KRTAP21-3Q3LHN1 58 aa12.91□□□□□ -0.34
HOXC13-201ENST00000243056 LIMD2Q9BT23 127 aa12.91□□□□□ -0.34
HOXC13-201ENST00000243056 LINC00528Q8N1L1 170 aa12.9□□□□□ -0.34
HOXC13-201ENST00000243056 C8orf87E5RJ46 101 aa12.88□□□□□ -0.35
HOXC13-201ENST00000243056 DSCR10P59022 87 aa12.88□□□□□ -0.35
HOXC13-201ENST00000243056 K7EQZ3 153 aa12.87□□□□□ -0.35
HOXC13-201ENST00000243056 C7orf65Q6ZTY9 151 aa12.86□□□□□ -0.35
HOXC13-201ENST00000243056 Q75L30 129 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms