RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 FAM218AQ96MZ4 157 aa8.98□□□□□ -0.97
NEK9-201ENST00000238616 CDH23Q9H251 3354 aa8.98□□□□□ -0.97
NEK9-201ENST00000238616 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
NEK9-201ENST00000238616 VPS13AQ96RL7 3174 aa8.97□□□□□ -0.97
NEK9-201ENST00000238616 LINC00310P59036 64 aa8.97□□□□□ -0.97
NEK9-201ENST00000238616 Q6ZQT0 140 aa8.97□□□□□ -0.97
NEK9-201ENST00000238616 TRBV7-4A0A0J9YYF1 115 aa8.97□□□□□ -0.97
NEK9-201ENST00000238616 KRTAP24-1Q3LI83 254 aa8.97□□□□□ -0.97
NEK9-201ENST00000238616 M0R2T5 61 aa8.95□□□□□ -0.98
NEK9-201ENST00000238616 PRO3102Q9H379 93 aa8.94□□□□□ -0.98
NEK9-201ENST00000238616 A8MWP4 228 aa8.94□□□□□ -0.98
NEK9-201ENST00000238616 STAB1Q9NY15 2570 aa8.93□□□□□ -0.98
NEK9-201ENST00000238616 COA5Q86WW8 74 aa8.93□□□□□ -0.98
NEK9-201ENST00000238616 A0A096LNJ9 63 aa8.93□□□□□ -0.98
NEK9-201ENST00000238616 UQCR11O14957 56 aa8.92□□□□□ -0.98
NEK9-201ENST00000238616 IGLV5-39A0A0G2JS06 123 aa8.92□□□□□ -0.98
NEK9-201ENST00000238616 CSNK1G2-AS1Q8NCQ2 148 aa8.92□□□□□ -0.98
NEK9-201ENST00000238616 PRUNE2Q8WUY3 3088 aa8.91□□□□□ -0.98
NEK9-201ENST00000238616 DNAH10OSP0CZ25 163 aa8.91□□□□□ -0.98
NEK9-201ENST00000238616 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
NEK9-201ENST00000238616 TRIOO75962 3097 aa8.91□□□□□ -0.98
NEK9-201ENST00000238616 MIR22HGQ0VDD5 57 aa8.91□□□□□ -0.98
NEK9-201ENST00000238616 ZNF575Q86XF7 245 aa8.91□□□□□ -0.98
NEK9-201ENST00000238616 LOC101927531A0A1B0GV80 90 aa8.9□□□□□ -0.98
NEK9-201ENST00000238616 ANAPC11Q9NYG5 84 aa8.9□□□□□ -0.98
NEK9-201ENST00000238616 H3BPC8 53 aa8.89□□□□□ -0.99
NEK9-201ENST00000238616 LAMA3Q16787 3333 aa8.89□□□□□ -0.99
NEK9-201ENST00000238616 CHD6Q8TD26 2715 aa8.88□□□□□ -0.99
NEK9-201ENST00000238616 Q8NAQ8 132 aa8.88□□□□□ -0.99
NEK9-201ENST00000238616 H3BNG1 76 aa8.88□□□□□ -0.99
NEK9-201ENST00000238616 LUZP6Q538Z0 58 aa8.88□□□□□ -0.99
NEK9-201ENST00000238616 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
NEK9-201ENST00000238616 COX8CQ7Z4L0 72 aa8.86□□□□□ -0.99
NEK9-201ENST00000238616 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
NEK9-201ENST00000238616 TEX15Q9BXT5 2789 aa8.85□□□□□ -0.99
NEK9-201ENST00000238616 ITPR3Q14573 2671 aa8.85□□□□□ -0.99
NEK9-201ENST00000238616 FLNAP21333 2647 aaKnown RBP8.83□□□□□ -1
NEK9-201ENST00000238616 A0A1B0GW54 56 aa8.83□□□□□ -1
NEK9-201ENST00000238616 A0A0G2JQZ4 141 aa8.83□□□□□ -1
NEK9-201ENST00000238616 A0A1W2PNN7 141 aa8.83□□□□□ -1
NEK9-201ENST00000238616 FLNBO75369 2602 aaKnown RBP8.83□□□□□ -1
NEK9-201ENST00000238616 A8MUN3 132 aa8.82□□□□□ -1
NEK9-201ENST00000238616 UNC80Q8N2C7 3258 aa8.82□□□□□ -1
NEK9-201ENST00000238616 Q8N1X5 172 aa8.82□□□□□ -1
NEK9-201ENST00000238616 IGLV5-48A0A075B6I7 105 aa8.81□□□□□ -1
NEK9-201ENST00000238616 NBEAL1Q6ZS30 2694 aa8.81□□□□□ -1
NEK9-201ENST00000238616 IGLV5-45A0A087WSX0 123 aa8.79□□□□□ -1
NEK9-201ENST00000238616 ZNF861PO60384 105 aa8.79□□□□□ -1
NEK9-201ENST00000238616 C15orf56Q8N910 161 aa8.79□□□□□ -1
NEK9-201ENST00000238616 CDC42SE1Q9NRR8 79 aa8.78□□□□□ -1
NEK9-201ENST00000238616 DMBT1Q9UGM3 2413 aaPredicted RBP8.78□□□□□ -1
NEK9-201ENST00000238616 KRTAP10-11P60412 298 aa8.78□□□□□ -1
NEK9-201ENST00000238616 IGFL1Q6UW32 110 aa8.78□□□□□ -1
NEK9-201ENST00000238616 PRR15Q8IV56 129 aa8.76□□□□□ -1.01
NEK9-201ENST00000238616 A0A1B0GVX0 72 aa8.76□□□□□ -1.01
NEK9-201ENST00000238616 LINC01546A6NGU7 62 aa8.76□□□□□ -1.01
NEK9-201ENST00000238616 IGLV1-50A0A075B6I6 118 aa8.75□□□□□ -1.01
NEK9-201ENST00000238616 COL6A5A8TX70 2615 aa8.75□□□□□ -1.01
NEK9-201ENST00000238616 SMCPP49901 116 aaPredicted RBP8.75□□□□□ -1.01
NEK9-201ENST00000238616 CAMK2N1Q7Z7J9 78 aa8.75□□□□□ -1.01
NEK9-201ENST00000238616 C8orf17Q9NRJ1 99 aa8.74□□□□□ -1.01
NEK9-201ENST00000238616 K7EIL1 84 aa8.73□□□□□ -1.01
NEK9-201ENST00000238616 MAP1AP78559 2803 aaPredicted RBP8.72□□□□□ -1.01
NEK9-201ENST00000238616 SZT2Q5T011 3432 aa8.72□□□□□ -1.01
NEK9-201ENST00000238616 Q6ZSA8 131 aa8.71□□□□□ -1.01
NEK9-201ENST00000238616 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.02
NEK9-201ENST00000238616 WDFY4Q6ZS81 3184 aa8.7□□□□□ -1.02
NEK9-201ENST00000238616 A0A087WTM6 91 aa8.7□□□□□ -1.02
NEK9-201ENST00000238616 LINC00483Q53H64 154 aa8.69□□□□□ -1.02
NEK9-201ENST00000238616 RPS28P62857 69 aaKnown RBP8.69□□□□□ -1.02
NEK9-201ENST00000238616 HELZ2Q9BYK8 2649 aaKnown RBP8.69□□□□□ -1.02
NEK9-201ENST00000238616 CYP4F30PQ9H0H9 118 aa8.69□□□□□ -1.02
NEK9-201ENST00000238616 SPEGQ15772 3267 aa8.68□□□□□ -1.02
NEK9-201ENST00000238616 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
NEK9-201ENST00000238616 FRYQ5TBA9 3013 aa8.67□□□□□ -1.02
NEK9-201ENST00000238616 PSORS1C2Q9UIG4 136 aa8.67□□□□□ -1.02
NEK9-201ENST00000238616 IGLV7-43P04211 117 aa8.66□□□□□ -1.02
NEK9-201ENST00000238616 KCNQ1DNQ9H478 68 aa8.65□□□□□ -1.02
NEK9-201ENST00000238616 VCANP13611 3396 aa8.65□□□□□ -1.02
NEK9-201ENST00000238616 Q8N377 158 aa8.65□□□□□ -1.03
NEK9-201ENST00000238616 FAM104AQ969W3 186 aa8.64□□□□□ -1.03
NEK9-201ENST00000238616 HTTP42858 3142 aa8.63□□□□□ -1.03
NEK9-201ENST00000238616 ERC2-IT1O76042 136 aa8.63□□□□□ -1.03
NEK9-201ENST00000238616 UNC79Q9P2D8 2635 aa8.63□□□□□ -1.03
NEK9-201ENST00000238616 BAHCC1Q9P281 2608 aa8.61□□□□□ -1.03
NEK9-201ENST00000238616 MGAQ8IWI9 3026 aa8.61□□□□□ -1.03
NEK9-201ENST00000238616 CRYBG3Q68DQ2 2970 aa8.6□□□□□ -1.03
NEK9-201ENST00000238616 ASH1LQ9NR48 2969 aaKnown RBP8.58□□□□□ -1.04
NEK9-201ENST00000238616 PRO0461Q9UI25 63 aa8.58□□□□□ -1.04
NEK9-201ENST00000238616 DSPP15924 2871 aaKnown RBP8.58□□□□□ -1.04
NEK9-201ENST00000238616 WIPF1O43516 503 aa8.58□□□□□ -1.04
NEK9-201ENST00000238616 USP34Q70CQ2 3546 aa8.57□□□□□ -1.04
NEK9-201ENST00000238616 PRR26Q8N8Z3 221 aa8.57□□□□□ -1.04
NEK9-201ENST00000238616 CD164Q04900 197 aa8.56□□□□□ -1.04
NEK9-201ENST00000238616 KTN1-AS1Q86SY8 53 aa8.56□□□□□ -1.04
NEK9-201ENST00000238616 IGLV7-46A0A075B6I9 117 aa8.56□□□□□ -1.04
NEK9-201ENST00000238616 COL6A3P12111 3177 aa8.54□□□□□ -1.04
NEK9-201ENST00000238616 TRANK1O15050 2925 aa8.53□□□□□ -1.04
NEK9-201ENST00000238616 WDFY3Q8IZQ1 3526 aa8.52□□□□□ -1.05
NEK9-201ENST00000238616 TLX1NBP0CAT3 122 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms