RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 MT1HL1P0DM35 61 aa6.88□□□□□ -1.31
SF3B6-201ENST00000233468 NCR3O14931 201 aa6.87□□□□□ -1.31
SF3B6-201ENST00000233468 S100A7L2Q5SY68 101 aa6.87□□□□□ -1.31
SF3B6-201ENST00000233468 ADAMTSL4-AS1Q5T5F5 129 aa6.87□□□□□ -1.31
SF3B6-201ENST00000233468 TMEM126AQ9H061 195 aa6.87□□□□□ -1.31
SF3B6-201ENST00000233468 PRYO14603 147 aa6.86□□□□□ -1.31
SF3B6-201ENST00000233468 IFITM1P13164 125 aa6.86□□□□□ -1.31
SF3B6-201ENST00000233468 Q8NDZ9 215 aa6.86□□□□□ -1.31
SF3B6-201ENST00000233468 LINC00308Q8TCZ7 52 aa6.86□□□□□ -1.31
SF3B6-201ENST00000233468 LINC01600Q96MT4 127 aa6.86□□□□□ -1.31
SF3B6-201ENST00000233468 LITAFQ99732 161 aa6.86□□□□□ -1.31
SF3B6-201ENST00000233468 TTTY13Q9BZ97 58 aa6.86□□□□□ -1.31
SF3B6-201ENST00000233468 SPANXCQ9NY87 97 aa6.86□□□□□ -1.31
SF3B6-201ENST00000233468 DDTP30046 118 aa6.85□□□□□ -1.31
SF3B6-201ENST00000233468 NPC2P61916 151 aa6.85□□□□□ -1.31
SF3B6-201ENST00000233468 FAM19A1Q7Z5A9 133 aa6.85□□□□□ -1.31
SF3B6-201ENST00000233468 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
SF3B6-201ENST00000233468 LINC00518Q8N0U6 118 aa6.85□□□□□ -1.31
SF3B6-201ENST00000233468 SPANXDQ9BXN6 97 aa6.85□□□□□ -1.31
SF3B6-201ENST00000233468 KCNQ1DNQ9H478 68 aa6.85□□□□□ -1.31
SF3B6-201ENST00000233468 PPDPFQ9H3Y8 114 aa6.84□□□□□ -1.31
SF3B6-201ENST00000233468 TRBV10-3A0A0K0K1G6 114 aa6.83□□□□□ -1.32
SF3B6-201ENST00000233468 ETDCA0A1B0GVM5 59 aa6.83□□□□□ -1.32
SF3B6-201ENST00000233468 C9orf118A6NHY6 69 aa6.83□□□□□ -1.32
SF3B6-201ENST00000233468 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
SF3B6-201ENST00000233468 HINT1P49773 126 aaPredicted RBP6.82□□□□□ -1.32
SF3B6-201ENST00000233468 JOSD1Q15040 202 aaPredicted RBP6.82□□□□□ -1.32
SF3B6-201ENST00000233468 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
SF3B6-201ENST00000233468 TMA7Q9Y2S6 64 aaKnown RBP6.82□□□□□ -1.32
SF3B6-201ENST00000233468 LRP2P98164 4655 aa6.82□□□□□ -1.32
SF3B6-201ENST00000233468 IGLV6-57P01721 117 aa6.81□□□□□ -1.32
SF3B6-201ENST00000233468 KRTAP13-1Q8IUC0 172 aa6.81□□□□□ -1.32
SF3B6-201ENST00000233468 OR13C6PQ8NH95 151 aa6.81□□□□□ -1.32
SF3B6-201ENST00000233468 VAMP8Q9BV40 100 aa6.81□□□□□ -1.32
SF3B6-201ENST00000233468 TRAV23DV6A0A075B6W5 121 aa6.8□□□□□ -1.32
SF3B6-201ENST00000233468 SPRR1AP35321 89 aa6.8□□□□□ -1.32
SF3B6-201ENST00000233468 RPL13AP40429 203 aaKnown RBP6.8□□□□□ -1.32
SF3B6-201ENST00000233468 PRLHP81277 87 aa6.8□□□□□ -1.32
SF3B6-201ENST00000233468 DLEU1O43261 78 aa6.79□□□□□ -1.32
SF3B6-201ENST00000233468 COX8AP10176 69 aa6.79□□□□□ -1.32
SF3B6-201ENST00000233468 HIGD2AQ9BW72 106 aa6.79□□□□□ -1.32
SF3B6-201ENST00000233468 ZNF706Q9Y5V0 76 aaPredicted RBP6.79□□□□□ -1.32
SF3B6-201ENST00000233468 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
SF3B6-201ENST00000233468 SPATA45Q537H7 98 aa6.78□□□□□ -1.32
SF3B6-201ENST00000233468 MUSTN1Q8IVN3 82 aa6.78□□□□□ -1.32
SF3B6-201ENST00000233468 PAM16Q9Y3D7 125 aa6.78□□□□□ -1.32
SF3B6-201ENST00000233468 TRAV13-2A0A0B4J235 113 aa6.77□□□□□ -1.33
SF3B6-201ENST00000233468 ZNF73O43830 326 aaPredicted RBP6.77□□□□□ -1.33
SF3B6-201ENST00000233468 KRTAP10-8P60410 259 aa6.77□□□□□ -1.33
SF3B6-201ENST00000233468 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
SF3B6-201ENST00000233468 TNXBP22105 4242 aa6.77□□□□□ -1.33
SF3B6-201ENST00000233468 KRTAP1-4P0C5Y4 121 aa6.76□□□□□ -1.33
SF3B6-201ENST00000233468 CRYGAP11844 174 aa6.76□□□□□ -1.33
SF3B6-201ENST00000233468 HIST1H4GQ99525 98 aa6.76□□□□□ -1.33
SF3B6-201ENST00000233468 A6NDN8 102 aa6.75□□□□□ -1.33
SF3B6-201ENST00000233468 B5MCH6 92 aa6.75□□□□□ -1.33
SF3B6-201ENST00000233468 KRTAP4-16G5E9R7 235 aaPredicted RBP6.75□□□□□ -1.33
SF3B6-201ENST00000233468 FAM229BQ4G0N7 80 aa6.75□□□□□ -1.33
SF3B6-201ENST00000233468 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
SF3B6-201ENST00000233468 SLC25A34Q6PIV7 304 aa6.75□□□□□ -1.33
SF3B6-201ENST00000233468 PRR26Q8N8Z3 221 aa6.75□□□□□ -1.33
SF3B6-201ENST00000233468 Q6ZRX8 168 aa6.74□□□□□ -1.33
SF3B6-201ENST00000233468 C14orf144Q96I85 54 aa6.74□□□□□ -1.33
SF3B6-201ENST00000233468 SMCR5Q8TEV8 140 aa6.73□□□□□ -1.33
SF3B6-201ENST00000233468 HIGD1BQ9P298 99 aa6.73□□□□□ -1.33
SF3B6-201ENST00000233468 PYY3Q5JQD4 70 aa6.72□□□□□ -1.33
SF3B6-201ENST00000233468 KRTAP4-2Q9BYR5 136 aa6.72□□□□□ -1.33
SF3B6-201ENST00000233468 DHRS4-AS1Q9P1J3 65 aa6.72□□□□□ -1.33
SF3B6-201ENST00000233468 TRBV7-6A0A0J9YX20 115 aa6.71□□□□□ -1.34
SF3B6-201ENST00000233468 TYMSOSQ8TAI1 123 aa6.71□□□□□ -1.34
SF3B6-201ENST00000233468 A4D1N5 150 aa6.7□□□□□ -1.34
SF3B6-201ENST00000233468 COX7BP24311 80 aa6.7□□□□□ -1.34
SF3B6-201ENST00000233468 VAMP3Q15836 100 aa6.7□□□□□ -1.34
SF3B6-201ENST00000233468 C6orf99Q4VX62 202 aa6.7□□□□□ -1.34
SF3B6-201ENST00000233468 SPRR4Q96PI1 79 aa6.7□□□□□ -1.34
SF3B6-201ENST00000233468 A0A1B0GWB2 263 aa6.69□□□□□ -1.34
SF3B6-201ENST00000233468 TAL2Q16559 108 aa6.69□□□□□ -1.34
SF3B6-201ENST00000233468 KRTAP4-11Q9BYQ6 195 aa6.69□□□□□ -1.34
SF3B6-201ENST00000233468 ELOF1P60002 83 aaKnown RBP6.68□□□□□ -1.34
SF3B6-201ENST00000233468 Q9BRP9 147 aa6.68□□□□□ -1.34
SF3B6-201ENST00000233468 NHP2Q9NX24 153 aaKnown RBP6.68□□□□□ -1.34
SF3B6-201ENST00000233468 A0A087X002 238 aa6.67□□□□□ -1.34
SF3B6-201ENST00000233468 GAGE2AQ6NT46 116 aa6.67□□□□□ -1.34
SF3B6-201ENST00000233468 ANAPC11Q9NYG5 84 aa6.67□□□□□ -1.34
SF3B6-201ENST00000233468 SLC25A20O43772 301 aa6.66□□□□□ -1.34
SF3B6-201ENST00000233468 LINC00483Q53H64 154 aa6.66□□□□□ -1.34
SF3B6-201ENST00000233468 RAB37Q96AX2 223 aa6.66□□□□□ -1.34
SF3B6-201ENST00000233468 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
SF3B6-201ENST00000233468 ERC2-IT1O76042 136 aa6.65□□□□□ -1.34
SF3B6-201ENST00000233468 C2orf91Q6ZV80 131 aa6.65□□□□□ -1.34
SF3B6-201ENST00000233468 SMIM11BQ8TCY0 68 aa6.65□□□□□ -1.34
SF3B6-201ENST00000233468 UQCR10Q9UDW1 63 aa6.65□□□□□ -1.34
SF3B6-201ENST00000233468 CTAG1AP78358 180 aa6.64□□□□□ -1.35
SF3B6-201ENST00000233468 CEND1Q8N111 149 aa6.64□□□□□ -1.35
SF3B6-201ENST00000233468 A0A0B4J2C4 111 aa6.63□□□□□ -1.35
SF3B6-201ENST00000233468 SNCGO76070 127 aa6.63□□□□□ -1.35
SF3B6-201ENST00000233468 HSD52Q0P140 79 aa6.63□□□□□ -1.35
SF3B6-201ENST00000233468 KRTAP13-2Q52LG2 175 aa6.63□□□□□ -1.35
SF3B6-201ENST00000233468 BVES-AS1Q5T3Y7 98 aa6.63□□□□□ -1.35
SF3B6-201ENST00000233468 SPAG11AQ6PDA7 123 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms