RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 RTL8CO15255 209 aa2.53□□□□□ -2
CDH9-201ENST00000231021 C1orf137Q5JT78 98 aa2.53□□□□□ -2
CDH9-201ENST00000231021 COA5Q86WW8 74 aa2.53□□□□□ -2
CDH9-201ENST00000231021 FAM208BQ5VWN6 2430 aa2.53□□□□□ -2
CDH9-201ENST00000231021 EPG5Q9HCE0 2579 aa2.53□□□□□ -2
CDH9-201ENST00000231021 NBPF19A0A087WUL8 3843 aa2.53□□□□□ -2
CDH9-201ENST00000231021 ZDBF2Q9HCK1 2354 aa2.53□□□□□ -2
CDH9-201ENST00000231021 H0Y9P7 68 aa2.53□□□□□ -2.01
CDH9-201ENST00000231021 Q5W150 140 aa2.53□□□□□ -2.01
CDH9-201ENST00000231021 PRR34Q9NV39 138 aa2.53□□□□□ -2.01
CDH9-201ENST00000231021 RYR3Q15413 4870 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 DEFB131BA0A096LNP1 70 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 KRTAP10-2P60368 255 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 KRTAP7-1Q8IUC3 87 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 PRB1P04280 392 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 UNQ6190/PRO20217Q6UXQ8 127 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 BRD3OSQ6XYD6 125 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 ST20-AS1Q8NBB2 130 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 CHD9Q3L8U1 2897 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 USP24Q9UPU5 2620 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 GPR179Q6PRD1 2367 aa2.52□□□□□ -2.01
CDH9-201ENST00000231021 DOPEY2Q9Y3R5 2298 aa2.51□□□□□ -2.01
CDH9-201ENST00000231021 DEFB112Q30KQ8 113 aa2.51□□□□□ -2.01
CDH9-201ENST00000231021 ICE1Q9Y2F5 2266 aa2.51□□□□□ -2.01
CDH9-201ENST00000231021 AHCTF1Q8WYP5 2266 aa2.51□□□□□ -2.01
CDH9-201ENST00000231021 LELP1Q5T871 98 aa2.51□□□□□ -2.01
CDH9-201ENST00000231021 K7EQZ3 153 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 SPRR1AP35321 89 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 C6orf48Q9UBA6 75 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 WDR87Q6ZQQ6 2873 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 A0A1B0GU33 70 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 ANGP03950 147 aaKnown RBP2.5□□□□□ -2.01
CDH9-201ENST00000231021 IGLV7-43P04211 117 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 DEFB124Q8NES8 71 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 CHD7Q9P2D1 2997 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 IGLV10-54A0A075B6I4 117 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 Q6ZRX8 168 aa2.5□□□□□ -2.01
CDH9-201ENST00000231021 MUC6Q6W4X9 2439 aa2.49□□□□□ -2.01
CDH9-201ENST00000231021 A0A0G2JQZ4 141 aa2.49□□□□□ -2.01
CDH9-201ENST00000231021 SPAG11AQ6PDA7 123 aa2.49□□□□□ -2.01
CDH9-201ENST00000231021 PCLOQ9Y6V0 5065 aa2.49□□□□□ -2.01
CDH9-201ENST00000231021 IGKV2-30P06310 120 aa2.48□□□□□ -2.01
CDH9-201ENST00000231021 LINC00304Q8N9R0 145 aa2.48□□□□□ -2.01
CDH9-201ENST00000231021 SPATA8Q6RVD6 105 aa2.48□□□□□ -2.01
CDH9-201ENST00000231021 TECTAO75443 2155 aa2.47□□□□□ -2.01
CDH9-201ENST00000231021 USP34Q70CQ2 3546 aa2.47□□□□□ -2.01
CDH9-201ENST00000231021 H3BNG1 76 aa2.47□□□□□ -2.01
CDH9-201ENST00000231021 SPINK7P58062 85 aa2.47□□□□□ -2.01
CDH9-201ENST00000231021 SZT2Q5T011 3432 aa2.47□□□□□ -2.01
CDH9-201ENST00000231021 PTPRQQ9UMZ3 2332 aa2.47□□□□□ -2.01
CDH9-201ENST00000231021 SPINT4Q6UDR6 99 aa2.46□□□□□ -2.02
CDH9-201ENST00000231021 C10orf99Q6UWK7 81 aa2.46□□□□□ -2.02
CDH9-201ENST00000231021 SPRR1BP22528 89 aa2.45□□□□□ -2.02
CDH9-201ENST00000231021 CCL19Q99731 98 aa2.45□□□□□ -2.02
CDH9-201ENST00000231021 RPL37AP61513 92 aaKnown RBP2.45□□□□□ -2.02
CDH9-201ENST00000231021 SPACA4Q8TDM5 124 aa2.45□□□□□ -2.02
CDH9-201ENST00000231021 UNC80Q8N2C7 3258 aa2.45□□□□□ -2.02
CDH9-201ENST00000231021 UTRNP46939 3433 aa2.45□□□□□ -2.02
CDH9-201ENST00000231021 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
CDH9-201ENST00000231021 CLPSL2Q6UWE3 100 aa2.45□□□□□ -2.02
CDH9-201ENST00000231021 WFDC13Q8IUB5 93 aa2.45□□□□□ -2.02
CDH9-201ENST00000231021 DEFB105AQ8NG35 78 aa2.45□□□□□ -2.02
CDH9-201ENST00000231021 HELZ2Q9BYK8 2649 aaKnown RBP2.44□□□□□ -2.02
CDH9-201ENST00000231021 ACYP2P14621 99 aa2.44□□□□□ -2.02
CDH9-201ENST00000231021 LINC00472Q9H8W2 130 aa2.44□□□□□ -2.02
CDH9-201ENST00000231021 ZNF292O60281 2723 aa2.44□□□□□ -2.02
CDH9-201ENST00000231021 DEFB130BP0DP73 79 aa2.44□□□□□ -2.02
CDH9-201ENST00000231021 DEFB130AP0DP74 79 aa2.44□□□□□ -2.02
CDH9-201ENST00000231021 SPTBN2O15020 2390 aa2.44□□□□□ -2.02
CDH9-201ENST00000231021 A0A087WSZ3 146 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 KRTAP10-8P60410 259 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 TPRXLQ17RH7 258 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 IGFL1Q6UW32 110 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 WFDC10BQ8IUB3 73 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 PKDREJQ9NTG1 2253 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 MAST4O15021 2626 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 NUPR2A6NF83 97 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 HRES1P13985 223 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 DEFB136Q30KP8 78 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 COL6A3P12111 3177 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 RANBP2P49792 3224 aaKnown RBP2.43□□□□□ -2.02
CDH9-201ENST00000231021 MMP24-AS1A0A0U1RRL7 71 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 CHD6Q8TD26 2715 aa2.43□□□□□ -2.02
CDH9-201ENST00000231021 FBN2P35556 2912 aa2.42□□□□□ -2.02
CDH9-201ENST00000231021 SPTBN1Q01082 2364 aaKnown RBP2.42□□□□□ -2.02
CDH9-201ENST00000231021 IGKV2D-30A0A075B6S6 120 aa2.42□□□□□ -2.02
CDH9-201ENST00000231021 IGKV2-24A0A0C4DH68 120 aa2.42□□□□□ -2.02
CDH9-201ENST00000231021 UQCR11O14957 56 aa2.42□□□□□ -2.02
CDH9-201ENST00000231021 SPART-AS1P0CW21 52 aa2.42□□□□□ -2.02
CDH9-201ENST00000231021 HERC2O95714 4834 aa2.41□□□□□ -2.02
CDH9-201ENST00000231021 NCOR1O75376 2440 aa2.41□□□□□ -2.02
CDH9-201ENST00000231021 SETXQ7Z333 2677 aaKnown RBP2.41□□□□□ -2.02
CDH9-201ENST00000231021 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.41□□□□□ -2.02
CDH9-201ENST00000231021 ZZEF1O43149 2961 aa2.4□□□□□ -2.02
CDH9-201ENST00000231021 DNHD1Q96M86 4753 aa2.4□□□□□ -2.02
CDH9-201ENST00000231021 DYNC2H1Q8NCM8 4307 aaKnown RBP2.4□□□□□ -2.02
CDH9-201ENST00000231021 ROS1P08922 2347 aa2.4□□□□□ -2.03
CDH9-201ENST00000231021 DNAH14Q0VDD8 3507 aa2.4□□□□□ -2.03
CDH9-201ENST00000231021 CEP250Q9BV73 2442 aa2.4□□□□□ -2.03
CDH9-201ENST00000231021 A0A087WTM6 91 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms