RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
PTK7-202ENST00000230419 FAM30AQ9NZY2 134 aa11.26□□□□□ -0.61
PTK7-202ENST00000230419 IGLV9-49A0A0B4J1Y8 123 aa11.25□□□□□ -0.61
PTK7-202ENST00000230419 C14orf177Q52M58 125 aa11.24□□□□□ -0.61
PTK7-202ENST00000230419 FAM236DA0A1B0GTK5 79 aa11.24□□□□□ -0.61
PTK7-202ENST00000230419 FAM236CP0DP71 79 aa11.24□□□□□ -0.61
PTK7-202ENST00000230419 MPLKIPQ8TAP9 179 aa11.24□□□□□ -0.61
PTK7-202ENST00000230419 LINC01547P58512 204 aaPredicted RBP11.23□□□□□ -0.61
PTK7-202ENST00000230419 LINC01556Q5JQF7 62 aa11.23□□□□□ -0.61
PTK7-202ENST00000230419 C2orf48Q96LS8 159 aa11.23□□□□□ -0.61
PTK7-202ENST00000230419 Q6ZRP5 223 aa11.23□□□□□ -0.61
PTK7-202ENST00000230419 C22orf24Q9Y442 160 aa11.23□□□□□ -0.61
PTK7-202ENST00000230419 NDUFB1O75438 58 aa11.23□□□□□ -0.61
PTK7-202ENST00000230419 MRPL55Q7Z7F7 128 aaKnown RBP11.23□□□□□ -0.61
PTK7-202ENST00000230419 SPINK6Q6UWN8 80 aa11.23□□□□□ -0.61
PTK7-202ENST00000230419 MP68P56378 58 aa11.22□□□□□ -0.61
PTK7-202ENST00000230419 FAM168BA1KXE4 195 aa11.22□□□□□ -0.61
PTK7-202ENST00000230419 FAM19A3Q7Z5A8 133 aa11.21□□□□□ -0.62
PTK7-202ENST00000230419 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.62
PTK7-202ENST00000230419 LINC00167Q96N53 147 aa11.21□□□□□ -0.62
PTK7-202ENST00000230419 TENM3Q9P273 2699 aa11.2□□□□□ -0.62
PTK7-202ENST00000230419 LY6G6CO95867 125 aa11.2□□□□□ -0.62
PTK7-202ENST00000230419 REG3GQ6UW15 175 aa11.2□□□□□ -0.62
PTK7-202ENST00000230419 ST20-AS1Q8NBB2 130 aa11.18□□□□□ -0.62
PTK7-202ENST00000230419 A0A087WSZ3 146 aa11.18□□□□□ -0.62
PTK7-202ENST00000230419 LINC00612Q8N6U2 182 aa11.18□□□□□ -0.62
PTK7-202ENST00000230419 CASC10Q5T4H9 136 aa11.17□□□□□ -0.62
PTK7-202ENST00000230419 NHLRC4P0CG21 123 aaPredicted RBP11.16□□□□□ -0.62
PTK7-202ENST00000230419 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
PTK7-202ENST00000230419 SERTAD4-AS1Q5TG53 156 aa11.15□□□□□ -0.62
PTK7-202ENST00000230419 TMEM258P61165 79 aa11.15□□□□□ -0.62
PTK7-202ENST00000230419 C5orf47Q569G3 176 aa11.15□□□□□ -0.63
PTK7-202ENST00000230419 VPREB1P12018 145 aa11.14□□□□□ -0.63
PTK7-202ENST00000230419 A0A0G2JQZ4 141 aa11.13□□□□□ -0.63
PTK7-202ENST00000230419 A0A1W2PNN7 141 aa11.13□□□□□ -0.63
PTK7-202ENST00000230419 Q6ZQT0 140 aa11.13□□□□□ -0.63
PTK7-202ENST00000230419 PRR34Q9NV39 138 aa11.12□□□□□ -0.63
PTK7-202ENST00000230419 ELOF1P60002 83 aaKnown RBP11.12□□□□□ -0.63
PTK7-202ENST00000230419 PKD1L1Q8TDX9 2849 aa11.11□□□□□ -0.63
PTK7-202ENST00000230419 TRAV7A0A075B6U4 112 aa11.11□□□□□ -0.63
PTK7-202ENST00000230419 IGLV6-57P01721 117 aa11.11□□□□□ -0.63
PTK7-202ENST00000230419 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
PTK7-202ENST00000230419 IGKV4-1P06312 121 aa11.1□□□□□ -0.63
PTK7-202ENST00000230419 Q9BRP9 147 aa11.1□□□□□ -0.63
PTK7-202ENST00000230419 K7EIL1 84 aa11.09□□□□□ -0.63
PTK7-202ENST00000230419 Q8NDZ9 215 aa11.08□□□□□ -0.64
PTK7-202ENST00000230419 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
PTK7-202ENST00000230419 H3BNG1 76 aa11.07□□□□□ -0.64
PTK7-202ENST00000230419 PHF5AQ7RTV0 110 aaKnown RBP11.07□□□□□ -0.64
PTK7-202ENST00000230419 PRYO14603 147 aa11.06□□□□□ -0.64
PTK7-202ENST00000230419 BRK1Q8WUW1 75 aa11.06□□□□□ -0.64
PTK7-202ENST00000230419 MDFIQ99750 246 aa11.05□□□□□ -0.64
PTK7-202ENST00000230419 GVQW2A0A096LPI5 108 aaPredicted RBP11.03□□□□□ -0.64
PTK7-202ENST00000230419 LINC00208Q96KT6 92 aa11.02□□□□□ -0.64
PTK7-202ENST00000230419 Q6ZRX8 168 aa11.02□□□□□ -0.65
PTK7-202ENST00000230419 TM2D3Q9BRN9 247 aa11.02□□□□□ -0.65
PTK7-202ENST00000230419 DNAH10OSP0CZ25 163 aa11.01□□□□□ -0.65
PTK7-202ENST00000230419 TMEM254Q8TBM7 123 aa11.01□□□□□ -0.65
PTK7-202ENST00000230419 SMIM29Q86T20 159 aa11.01□□□□□ -0.65
PTK7-202ENST00000230419 NUPR2A6NF83 97 aa11□□□□□ -0.65
PTK7-202ENST00000230419 LINC00528Q8N1L1 170 aa10.98□□□□□ -0.65
PTK7-202ENST00000230419 TENM2Q9NT68 2774 aa10.98□□□□□ -0.65
PTK7-202ENST00000230419 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
PTK7-202ENST00000230419 CIRBP-AS1Q8TBR5 109 aa10.97□□□□□ -0.65
PTK7-202ENST00000230419 C4orf48Q5BLP8 95 aa10.96□□□□□ -0.65
PTK7-202ENST00000230419 LINC00476Q8WZB0 136 aa10.96□□□□□ -0.65
PTK7-202ENST00000230419 CXCL6P80162 114 aa10.95□□□□□ -0.66
PTK7-202ENST00000230419 LOC110117498A0A087WWA1 95 aa10.95□□□□□ -0.66
PTK7-202ENST00000230419 IGLV5-52A0A0A0MRZ9 124 aa10.95□□□□□ -0.66
PTK7-202ENST00000230419 CRYGAP11844 174 aa10.95□□□□□ -0.66
PTK7-202ENST00000230419 RPL37AP61513 92 aaKnown RBP10.95□□□□□ -0.66
PTK7-202ENST00000230419 TRRAPQ9Y4A5 3859 aa10.94□□□□□ -0.66
PTK7-202ENST00000230419 IGHV6-1A0A0B4J1U7 121 aa10.94□□□□□ -0.66
PTK7-202ENST00000230419 LINC00474Q9P2X8 69 aa10.94□□□□□ -0.66
PTK7-202ENST00000230419 F8WDY8 70 aa10.93□□□□□ -0.66
PTK7-202ENST00000230419 EPM2AB3EWF7 344 aa10.91□□□□□ -0.66
PTK7-202ENST00000230419 ERC2-IT1O76042 136 aa10.91□□□□□ -0.66
PTK7-202ENST00000230419 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
PTK7-202ENST00000230419 Q8N377 158 aa10.91□□□□□ -0.66
PTK7-202ENST00000230419 NDUFC1O43677 76 aa10.91□□□□□ -0.66
PTK7-202ENST00000230419 Q8NBF4 154 aa10.91□□□□□ -0.66
PTK7-202ENST00000230419 CASC2Q6XLA1 102 aa10.91□□□□□ -0.66
PTK7-202ENST00000230419 RETNLBQ9BQ08 111 aa10.9□□□□□ -0.66
PTK7-202ENST00000230419 TRBV7-6A0A0J9YX20 115 aa10.89□□□□□ -0.67
PTK7-202ENST00000230419 KCNQ1DNQ9H478 68 aa10.89□□□□□ -0.67
PTK7-202ENST00000230419 ZNF469Q96JG9 3925 aaPredicted RBP10.88□□□□□ -0.67
PTK7-202ENST00000230419 IGLV1-50A0A075B6I6 118 aa10.88□□□□□ -0.67
PTK7-202ENST00000230419 CHKB-CPT1BH3BT56 60 aa10.88□□□□□ -0.67
PTK7-202ENST00000230419 NBDYA0A0U1RRE5 68 aa10.87□□□□□ -0.67
PTK7-202ENST00000230419 HCG22E2RYF7 251 aa10.87□□□□□ -0.67
PTK7-202ENST00000230419 C16orf90A8MZG2 172 aa10.87□□□□□ -0.67
PTK7-202ENST00000230419 C1orf134Q5TEV5 83 aa10.85□□□□□ -0.67
PTK7-202ENST00000230419 MOBPQ13875 183 aa10.84□□□□□ -0.67
PTK7-202ENST00000230419 K7EQZ3 153 aa10.84□□□□□ -0.67
PTK7-202ENST00000230419 SERP1Q9Y6X1 66 aa10.83□□□□□ -0.68
PTK7-202ENST00000230419 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
PTK7-202ENST00000230419 TRBV7-4A0A0J9YYF1 115 aa10.83□□□□□ -0.68
PTK7-202ENST00000230419 ZNF706Q9Y5V0 76 aaPredicted RBP10.82□□□□□ -0.68
PTK7-202ENST00000230419 SMIM26A0A096LP01 95 aa10.81□□□□□ -0.68
PTK7-202ENST00000230419 C4orf26Q17RF5 130 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms