RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 PRLHP81277 87 aa11.86□□□□□ -0.51
SNAPC2-201ENST00000221573 KRTAP4-16G5E9R7 235 aaPredicted RBP11.86□□□□□ -0.51
SNAPC2-201ENST00000221573 CFC1BP0CG36 223 aa11.86□□□□□ -0.51
SNAPC2-201ENST00000221573 CFC1P0CG37 223 aa11.86□□□□□ -0.51
SNAPC2-201ENST00000221573 UBE2AP49459 152 aa11.85□□□□□ -0.51
SNAPC2-201ENST00000221573 KRTAP13-1Q8IUC0 172 aa11.85□□□□□ -0.51
SNAPC2-201ENST00000221573 ZNF73O43830 326 aaPredicted RBP11.84□□□□□ -0.51
SNAPC2-201ENST00000221573 ZNF861PO60384 105 aa11.84□□□□□ -0.51
SNAPC2-201ENST00000221573 TMEM238LA0A1B0GVL6 79 aa11.83□□□□□ -0.52
SNAPC2-201ENST00000221573 ETDCA0A1B0GVM5 59 aa11.83□□□□□ -0.52
SNAPC2-201ENST00000221573 A6NJY4 79 aa11.83□□□□□ -0.52
SNAPC2-201ENST00000221573 INAFM2P0DMQ5 153 aa11.83□□□□□ -0.52
SNAPC2-201ENST00000221573 CTAG1AP78358 180 aa11.83□□□□□ -0.52
SNAPC2-201ENST00000221573 RPL13AP40429 203 aaKnown RBP11.82□□□□□ -0.52
SNAPC2-201ENST00000221573 CBY1Q9Y3M2 126 aa11.82□□□□□ -0.52
SNAPC2-201ENST00000221573 A0A0B4J2C4 111 aa11.81□□□□□ -0.52
SNAPC2-201ENST00000221573 RPL28P46779 137 aaKnown RBP11.81□□□□□ -0.52
SNAPC2-201ENST00000221573 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
SNAPC2-201ENST00000221573 B5MCH6 92 aa11.81□□□□□ -0.52
SNAPC2-201ENST00000221573 RAB37Q96AX2 223 aa11.81□□□□□ -0.52
SNAPC2-201ENST00000221573 C6orf99Q4VX62 202 aa11.8□□□□□ -0.52
SNAPC2-201ENST00000221573 SMIM11BQ8TCY0 68 aa11.8□□□□□ -0.52
SNAPC2-201ENST00000221573 DIRC1Q969H9 104 aa11.8□□□□□ -0.52
SNAPC2-201ENST00000221573 NHP2Q9NX24 153 aaKnown RBP11.8□□□□□ -0.52
SNAPC2-201ENST00000221573 FLG2Q5D862 2391 aaPredicted RBP11.79□□□□□ -0.52
SNAPC2-201ENST00000221573 BVES-AS1Q5T3Y7 98 aa11.79□□□□□ -0.52
SNAPC2-201ENST00000221573 H0Y9J4 135 aa11.77□□□□□ -0.52
SNAPC2-201ENST00000221573 HINT1P49773 126 aaPredicted RBP11.77□□□□□ -0.52
SNAPC2-201ENST00000221573 Q6ZRX8 168 aa11.77□□□□□ -0.52
SNAPC2-201ENST00000221573 H7C2G1 150 aa11.76□□□□□ -0.53
SNAPC2-201ENST00000221573 K7ERJ3 54 aa11.76□□□□□ -0.53
SNAPC2-201ENST00000221573 HIGD2AQ9BW72 106 aa11.76□□□□□ -0.53
SNAPC2-201ENST00000221573 SMCR5Q8TEV8 140 aa11.75□□□□□ -0.53
SNAPC2-201ENST00000221573 Q9BRP9 147 aa11.75□□□□□ -0.53
SNAPC2-201ENST00000221573 PRO1854Q9UHT4 67 aa11.75□□□□□ -0.53
SNAPC2-201ENST00000221573 A0A1B0GWB2 263 aa11.73□□□□□ -0.53
SNAPC2-201ENST00000221573 ELOF1P60002 83 aaKnown RBP11.73□□□□□ -0.53
SNAPC2-201ENST00000221573 PCLOQ9Y6V0 5065 aa11.73□□□□□ -0.53
SNAPC2-201ENST00000221573 MYCBP2O75592 4640 aa11.72□□□□□ -0.53
SNAPC2-201ENST00000221573 M0R143 59 aa11.72□□□□□ -0.53
SNAPC2-201ENST00000221573 COX7BP24311 80 aa11.72□□□□□ -0.53
SNAPC2-201ENST00000221573 LRP1Q07954 4544 aaKnown RBP11.71□□□□□ -0.54
SNAPC2-201ENST00000221573 TRBV7-6A0A0J9YX20 115 aa11.7□□□□□ -0.54
SNAPC2-201ENST00000221573 ERC2-IT1O76042 136 aa11.7□□□□□ -0.54
SNAPC2-201ENST00000221573 Q1RN00 199 aa11.7□□□□□ -0.54
SNAPC2-201ENST00000221573 FAT3Q8TDW7 4589 aa11.69□□□□□ -0.54
SNAPC2-201ENST00000221573 KRTAP1-4P0C5Y4 121 aa11.67□□□□□ -0.54
SNAPC2-201ENST00000221573 BATFQ16520 125 aa11.65□□□□□ -0.54
SNAPC2-201ENST00000221573 TSPAN13O95857 204 aa11.65□□□□□ -0.55
SNAPC2-201ENST00000221573 VAMP3Q15836 100 aa11.65□□□□□ -0.55
SNAPC2-201ENST00000221573 DHRS4-AS1Q9P1J3 65 aa11.65□□□□□ -0.55
SNAPC2-201ENST00000221573 SPRR4Q96PI1 79 aa11.63□□□□□ -0.55
SNAPC2-201ENST00000221573 ANAPC11Q9NYG5 84 aa11.63□□□□□ -0.55
SNAPC2-201ENST00000221573 TRIAP1O43715 76 aa11.62□□□□□ -0.55
SNAPC2-201ENST00000221573 ST20-AS1Q8NBB2 130 aa11.61□□□□□ -0.55
SNAPC2-201ENST00000221573 LINC01600Q96MT4 127 aa11.6□□□□□ -0.55
SNAPC2-201ENST00000221573 PCP4L1A6NKN8 68 aa11.6□□□□□ -0.55
SNAPC2-201ENST00000221573 LINC00575Q6W349 94 aa11.6□□□□□ -0.55
SNAPC2-201ENST00000221573 ZNF706Q9Y5V0 76 aaPredicted RBP11.6□□□□□ -0.55
SNAPC2-201ENST00000221573 OXTP01178 125 aa11.59□□□□□ -0.55
SNAPC2-201ENST00000221573 PSMB2P49721 201 aa11.59□□□□□ -0.55
SNAPC2-201ENST00000221573 KRTAP29-1A8MX34 341 aaPredicted RBP11.58□□□□□ -0.56
SNAPC2-201ENST00000221573 GAGE2AQ6NT46 116 aa11.57□□□□□ -0.56
SNAPC2-201ENST00000221573 PRR26Q8N8Z3 221 aa11.57□□□□□ -0.56
SNAPC2-201ENST00000221573 A0A087X002 238 aa11.56□□□□□ -0.56
SNAPC2-201ENST00000221573 SLC25A20O43772 301 aa11.56□□□□□ -0.56
SNAPC2-201ENST00000221573 FAM218AQ96MZ4 157 aa11.56□□□□□ -0.56
SNAPC2-201ENST00000221573 hADV29S1A0JD25 119 aa11.55□□□□□ -0.56
SNAPC2-201ENST00000221573 H0YGX0 51 aa11.55□□□□□ -0.56
SNAPC2-201ENST00000221573 SNHG12Q9BXW3 62 aa11.55□□□□□ -0.56
SNAPC2-201ENST00000221573 NAA38Q9BRA0 125 aaKnown RBP11.55□□□□□ -0.56
SNAPC2-201ENST00000221573 LINC00483Q53H64 154 aa11.54□□□□□ -0.56
SNAPC2-201ENST00000221573 TNXBP22105 4242 aa11.53□□□□□ -0.56
SNAPC2-201ENST00000221573 MT1HL1P0DM35 61 aa11.53□□□□□ -0.56
SNAPC2-201ENST00000221573 FAM229BQ4G0N7 80 aa11.53□□□□□ -0.56
SNAPC2-201ENST00000221573 CLEC2BQ92478 149 aa11.53□□□□□ -0.56
SNAPC2-201ENST00000221573 COX6CP09669 75 aa11.51□□□□□ -0.57
SNAPC2-201ENST00000221573 CRYGAP11844 174 aa11.51□□□□□ -0.57
SNAPC2-201ENST00000221573 Q6ZQY7 126 aa11.51□□□□□ -0.57
SNAPC2-201ENST00000221573 DEFB105AQ8NG35 78 aa11.51□□□□□ -0.57
SNAPC2-201ENST00000221573 LINC01547P58512 204 aaPredicted RBP11.5□□□□□ -0.57
SNAPC2-201ENST00000221573 KRTAP13-2Q52LG2 175 aa11.5□□□□□ -0.57
SNAPC2-201ENST00000221573 KRTAP10-8P60410 259 aa11.5□□□□□ -0.57
SNAPC2-201ENST00000221573 J3QL48 77 aa11.49□□□□□ -0.57
SNAPC2-201ENST00000221573 C3orf22Q8N5N4 141 aa11.49□□□□□ -0.57
SNAPC2-201ENST00000221573 IGLV5-48A0A075B6I7 105 aa11.48□□□□□ -0.57
SNAPC2-201ENST00000221573 SPRR1BP22528 89 aa11.48□□□□□ -0.57
SNAPC2-201ENST00000221573 TAX1BP3O14907 124 aa11.47□□□□□ -0.57
SNAPC2-201ENST00000221573 SCGB1C2P0DMR2 95 aa11.47□□□□□ -0.57
SNAPC2-201ENST00000221573 TEX49A0A1B0GTD5 131 aa11.46□□□□□ -0.57
SNAPC2-201ENST00000221573 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.46□□□□□ -0.57
SNAPC2-201ENST00000221573 A0A1B0GX51 115 aa11.45□□□□□ -0.58
SNAPC2-201ENST00000221573 H3BUT2 72 aa11.45□□□□□ -0.58
SNAPC2-201ENST00000221573 Q8N377 158 aa11.45□□□□□ -0.58
SNAPC2-201ENST00000221573 TYMSOSQ8TAI1 123 aa11.45□□□□□ -0.58
SNAPC2-201ENST00000221573 IGLV9-49A0A0B4J1Y8 123 aa11.44□□□□□ -0.58
SNAPC2-201ENST00000221573 SNCGO76070 127 aa11.44□□□□□ -0.58
SNAPC2-201ENST00000221573 DMBT1Q9UGM3 2413 aaPredicted RBP11.42□□□□□ -0.58
SNAPC2-201ENST00000221573 C9orf118A6NHY6 69 aa11.42□□□□□ -0.58
SNAPC2-201ENST00000221573 LST1O00453 97 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms