RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 BCE1O60756 84 aa13.76□□□□□ -0.21
CCDC130-201ENST00000221554 IGLV5-37A0A075B6J1 123 aa13.75□□□□□ -0.21
CCDC130-201ENST00000221554 CXCL6P80162 114 aa13.74□□□□□ -0.21
CCDC130-201ENST00000221554 UPK3BQ9BT76 320 aa13.74□□□□□ -0.21
CCDC130-201ENST00000221554 Q6ZVQ6 151 aa13.73□□□□□ -0.21
CCDC130-201ENST00000221554 MEGF8Q7Z7M0 2845 aa13.73□□□□□ -0.21
CCDC130-201ENST00000221554 C7orf33Q8WU49 177 aa13.71□□□□□ -0.21
CCDC130-201ENST00000221554 LINC01547P58512 204 aaPredicted RBP13.71□□□□□ -0.22
CCDC130-201ENST00000221554 DHRS4-AS1Q9P1J3 65 aa13.71□□□□□ -0.22
CCDC130-201ENST00000221554 PRYO14603 147 aa13.7□□□□□ -0.22
CCDC130-201ENST00000221554 SERTAD4-AS1Q5TG53 156 aa13.68□□□□□ -0.22
CCDC130-201ENST00000221554 FAM19A1Q7Z5A9 133 aa13.68□□□□□ -0.22
CCDC130-201ENST00000221554 HAMPP81172 84 aa13.68□□□□□ -0.22
CCDC130-201ENST00000221554 K7EIL1 84 aa13.66□□□□□ -0.22
CCDC130-201ENST00000221554 M0R2N4 97 aa13.66□□□□□ -0.22
CCDC130-201ENST00000221554 SMIM20Q8N5G0 67 aa13.66□□□□□ -0.22
CCDC130-201ENST00000221554 FBN3Q75N90 2809 aa13.65□□□□□ -0.22
CCDC130-201ENST00000221554 LOC107984640A0A0U1RRK4 108 aa13.64□□□□□ -0.23
CCDC130-201ENST00000221554 PRB2P02812 416 aaPredicted RBP13.64□□□□□ -0.23
CCDC130-201ENST00000221554 IGLV1-50A0A075B6I6 118 aa13.63□□□□□ -0.23
CCDC130-201ENST00000221554 A0A1B0GW54 56 aa13.63□□□□□ -0.23
CCDC130-201ENST00000221554 SPRR1AP35321 89 aa13.63□□□□□ -0.23
CCDC130-201ENST00000221554 Q6ZRX8 168 aa13.63□□□□□ -0.23
CCDC130-201ENST00000221554 PRKDCP78527 4128 aaKnown RBP13.62□□□□□ -0.23
CCDC130-201ENST00000221554 ETDCA0A1B0GVM5 59 aa13.6□□□□□ -0.23
CCDC130-201ENST00000221554 KRTAP4-16G5E9R7 235 aaPredicted RBP13.59□□□□□ -0.23
CCDC130-201ENST00000221554 IGLV5-48A0A075B6I7 105 aa13.58□□□□□ -0.23
CCDC130-201ENST00000221554 CASC10Q5T4H9 136 aa13.58□□□□□ -0.24
CCDC130-201ENST00000221554 Q8N377 158 aa13.58□□□□□ -0.24
CCDC130-201ENST00000221554 TMEM258P61165 79 aa13.57□□□□□ -0.24
CCDC130-201ENST00000221554 MRPL55Q7Z7F7 128 aaKnown RBP13.57□□□□□ -0.24
CCDC130-201ENST00000221554 COL7A1Q02388 2944 aa13.57□□□□□ -0.24
CCDC130-201ENST00000221554 TRAV7A0A075B6U4 112 aa13.56□□□□□ -0.24
CCDC130-201ENST00000221554 TENM3Q9P273 2699 aa13.54□□□□□ -0.24
CCDC130-201ENST00000221554 RPL37AP8A6NKH3 93 aa13.54□□□□□ -0.24
CCDC130-201ENST00000221554 DEFB105AQ8NG35 78 aa13.53□□□□□ -0.24
CCDC130-201ENST00000221554 TGP01266 2768 aa13.53□□□□□ -0.24
CCDC130-201ENST00000221554 NREPQ16612 68 aa13.53□□□□□ -0.24
CCDC130-201ENST00000221554 FAM168BA1KXE4 195 aa13.52□□□□□ -0.25
CCDC130-201ENST00000221554 RPS28P62857 69 aaKnown RBP13.5□□□□□ -0.25
CCDC130-201ENST00000221554 Q9BRP9 147 aa13.5□□□□□ -0.25
CCDC130-201ENST00000221554 FUSP35637 526 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCDC130-201ENST00000221554 CNBPP62633 177 aaKnown RBP13.49□□□□□ -0.25
CCDC130-201ENST00000221554 KRTAP7-1Q8IUC3 87 aa13.49□□□□□ -0.25
CCDC130-201ENST00000221554 C14orf177Q52M58 125 aa13.48□□□□□ -0.25
CCDC130-201ENST00000221554 FAM19A5Q7Z5A7 132 aaPredicted RBP13.48□□□□□ -0.25
CCDC130-201ENST00000221554 REG3GQ6UW15 175 aa13.48□□□□□ -0.25
CCDC130-201ENST00000221554 DNAH9Q9NYC9 4486 aa13.46□□□□□ -0.25
CCDC130-201ENST00000221554 C16orf90A8MZG2 172 aa13.46□□□□□ -0.25
CCDC130-201ENST00000221554 J3KT08 172 aa13.45□□□□□ -0.26
CCDC130-201ENST00000221554 TNP2Q05952 138 aa13.45□□□□□ -0.26
CCDC130-201ENST00000221554 PSCAO43653 123 aa13.44□□□□□ -0.26
CCDC130-201ENST00000221554 PKIGQ9Y2B9 76 aa13.44□□□□□ -0.26
CCDC130-201ENST00000221554 UBE2BP63146 152 aa13.43□□□□□ -0.26
CCDC130-201ENST00000221554 UBE2DNLQ8IWF7 75 aa13.43□□□□□ -0.26
CCDC130-201ENST00000221554 BPY2O14599 106 aa13.43□□□□□ -0.26
CCDC130-201ENST00000221554 CYSTM1Q9H1C7 97 aa13.43□□□□□ -0.26
CCDC130-201ENST00000221554 C1orf137Q5JT78 98 aa13.42□□□□□ -0.26
CCDC130-201ENST00000221554 SCXQ7RTU7 201 aa13.41□□□□□ -0.26
CCDC130-201ENST00000221554 C20orf197Q8N268 126 aa13.41□□□□□ -0.26
CCDC130-201ENST00000221554 APLNQ9ULZ1 77 aa13.41□□□□□ -0.26
CCDC130-201ENST00000221554 Q8NBF4 154 aa13.39□□□□□ -0.27
CCDC130-201ENST00000221554 HUWE1Q7Z6Z7 4374 aaKnown RBP13.38□□□□□ -0.27
CCDC130-201ENST00000221554 STAB2Q8WWQ8 2551 aa13.38□□□□□ -0.27
CCDC130-201ENST00000221554 KLKP1Q107X0 134 aa13.38□□□□□ -0.27
CCDC130-201ENST00000221554 SPRR4Q96PI1 79 aa13.38□□□□□ -0.27
CCDC130-201ENST00000221554 C3orf84H3BNL1 204 aa13.37□□□□□ -0.27
CCDC130-201ENST00000221554 ST20-AS1Q8NBB2 130 aa13.37□□□□□ -0.27
CCDC130-201ENST00000221554 A0A1W2PNM2 257 aa13.37□□□□□ -0.27
CCDC130-201ENST00000221554 IGKV4-1P06312 121 aa13.37□□□□□ -0.27
CCDC130-201ENST00000221554 ERC2-IT1O76042 136 aa13.36□□□□□ -0.27
CCDC130-201ENST00000221554 B9D2Q9BPU9 175 aa13.36□□□□□ -0.27
CCDC130-201ENST00000221554 KRTAP1-5Q9BYS1 174 aa13.36□□□□□ -0.27
CCDC130-201ENST00000221554 A0A096LNI7 61 aa13.35□□□□□ -0.27
CCDC130-201ENST00000221554 F8WEM9 126 aa13.35□□□□□ -0.27
CCDC130-201ENST00000221554 DPH3Q96FX2 82 aa13.35□□□□□ -0.27
CCDC130-201ENST00000221554 NDUFC1O43677 76 aa13.33□□□□□ -0.28
CCDC130-201ENST00000221554 DNAH1Q9P2D7 4330 aa13.3□□□□□ -0.28
CCDC130-201ENST00000221554 IGKV2-24A0A0C4DH68 120 aa13.3□□□□□ -0.28
CCDC130-201ENST00000221554 A0A1W2PNN7 141 aa13.3□□□□□ -0.28
CCDC130-201ENST00000221554 SMIM29Q86T20 159 aa13.3□□□□□ -0.28
CCDC130-201ENST00000221554 H0Y9J4 135 aa13.28□□□□□ -0.28
CCDC130-201ENST00000221554 IGLV8-61A0A075B6I0 122 aa13.27□□□□□ -0.28
CCDC130-201ENST00000221554 NUPR2A6NF83 97 aa13.27□□□□□ -0.28
CCDC130-201ENST00000221554 LINC00474Q9P2X8 69 aa13.27□□□□□ -0.28
CCDC130-201ENST00000221554 H7BZZ5 65 aa13.26□□□□□ -0.29
CCDC130-201ENST00000221554 FAM236DA0A1B0GTK5 79 aa13.25□□□□□ -0.29
CCDC130-201ENST00000221554 FAM236CP0DP71 79 aa13.25□□□□□ -0.29
CCDC130-201ENST00000221554 Q8N9L7 120 aa13.25□□□□□ -0.29
CCDC130-201ENST00000221554 C9orf163Q8N9P6 203 aa13.25□□□□□ -0.29
CCDC130-201ENST00000221554 SVIPQ8NHG7 77 aa13.25□□□□□ -0.29
CCDC130-201ENST00000221554 LINC00476Q8WZB0 136 aa13.25□□□□□ -0.29
CCDC130-201ENST00000221554 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.22□□□□□ -0.29
CCDC130-201ENST00000221554 NBDYA0A0U1RRE5 68 aa13.22□□□□□ -0.29
CCDC130-201ENST00000221554 OCR1Q9BZK8 76 aa13.22□□□□□ -0.29
CCDC130-201ENST00000221554 PRLHP81277 87 aa13.2□□□□□ -0.3
CCDC130-201ENST00000221554 LRCOL1A6NCL2 159 aa13.2□□□□□ -0.3
CCDC130-201ENST00000221554 ATP5EP56381 51 aaPredicted RBP13.2□□□□□ -0.3
CCDC130-201ENST00000221554 TMEM254Q8TBM7 123 aa13.2□□□□□ -0.3
CCDC130-201ENST00000221554 HIGD2AQ9BW72 106 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms