RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm28372A0A087WNV0 220 aa16.27■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Gm21900J3QP38 180 aa16.27■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Tnfsf11O35235 316 aa16.27■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Olfr996Q7TRA0 314 aa16.27■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Olfr1192-ps1A0A1L1SRD7 309 aa16.26■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Zfp983E9PUT0 460 aa16.26■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Rnase9P60154 184 aa16.26■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 CdsnQ7TPC1 561 aa16.26■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Higd1bQ99JY6 98 aa16.26■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Mrpl33Q9CQP0 65 aa16.26■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Tomm40Q9QYA2 361 aa16.26■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Bub3Q9WVA3 326 aa16.26■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Ighv7-4A0A0A6YXL5 121 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 2810408A11RikQ6NSU2 435 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Onecut2Q6XBJ3 505 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Gng5Q80SZ7 68 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Gm6096D3YTY6 151 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Pde6hP61249 83 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Crisp3Q03402 241 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Crebl2Q32M00 123 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Olfr150Q60895 312 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Olfr16Q62007 309 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Srsf2Q62093 221 aaKnown RBP16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Fbxl15Q91W61 300 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Q9D8L0 127 aa16.25■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Trav6-4A0A075B6B4 115 aa16.24■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Olfr553Q7TRS6 326 aa16.24■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Olfr1030Q8VFL5 318 aa16.24■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Wfdc15bQ9JHY4 80 aa16.24■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Tmem183Q9JJB9 375 aa16.24■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 TymsP07607 307 aa16.23■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Olfr963Q7TRA9 311 aa16.23■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Slc31a2Q9CPU9 143 aa16.23■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Ctdsp1P58466 261 aa16.22■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Wipf2Q6PEV3 440 aa16.22■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Nhp2Q9CRB2 153 aaKnown RBP16.22■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Spaca3Q9D9X8 221 aa16.22■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 KprpB2RUR4 657 aa16.22■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Tma7Q8K003 64 aaKnown RBP16.22■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Ube2e2Q91W82 201 aa16.22■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Ndufa6Q9CQZ5 131 aaKnown RBP16.22■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Igkv4-59A0A0B4J1I8 117 aa16.21■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Mettl23A2AA28 253 aa16.21■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Slc25a29Q8BL03 306 aa16.21■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Gm5468Q8C3D3 155 aa16.21■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Hyls1Q9CXX0 307 aa16.21■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Tmprss5Q9ER04 455 aa16.21■□□□□ 0.19
Ccdc88a-202ENSMUST00000109477 Ighv1-15A0A0A6YXA5 117 aa16.2■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Gm5741B2RVA4 72 aa16.2■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr624F8VQI7 308 aa16.2■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Bloc1s1O55102 125 aa16.2■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Edn1P22387 202 aa16.2■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr1246Q7TQZ6 314 aa16.2■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr1295Q8VF48 312 aa16.2■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Shisal2aA2A9G7 189 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Ccdc71lE9Q4T4 218 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Fli1P26323 452 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Ube2g1P62254 170 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Gal3st4Q3V1B8 480 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 SelplgQ62170 397 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Pygo2Q80V76 405 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Q8C3M9 231 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 A130051J06RikQ8CAU1 227 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr477Q8VGI6 310 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Anapc16Q9CPV2 110 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Rchy1Q9CR50 261 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Gm5849J3QPE5 117 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Hoxd3P09027 433 aa16.19■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Hivep1Q03172 2688 aa16.18■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr1369-ps1A0A140T8K7 317 aa16.18■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Gm3233E9Q2H5 230 aa16.18■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Slc25a48Q8BW66 306 aa16.18■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 GgctQ9D7X8 188 aa16.18■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Gpr35Q9ES90 307 aa16.18■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Psg18B2RSG7 476 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Tmem262D3Z338 116 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Tm4sf19E9Q9H8 206 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Gm8439G3UWA7 96 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Ccl1P10146 92 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Meox2P32443 303 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 ElobP62869 118 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Sfrp2P97299 295 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Gm5150Q1AN92 299 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Gm5464Q3UY29 175 aa16.17■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Trav21-dv12A0A075B6C4 109 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Igkv1-133A0A0B4J1H8 120 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Tac3P55099 116 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Tmem177Q8BPE4 311 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 C130073F10RikQ8C4L8 201 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr1440Q8VFV4 315 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 V1ra8Q9EQ48 279 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Xirp2Q4U4S6 3784 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 D830044I16RikA0A1D5RM53 117 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Tdgf1P51865 171 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 H2-DMb2Q31099 261 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr904Q7TRC9 310 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Tmem91Q8C581 172 aa16.16■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Trdv1A0A075B657 112 aa16.15■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr709-ps1A0A140T8J9 307 aa16.15■□□□□ 0.18
Ccdc88a-202ENSMUST00000109477 Olfr235E9Q9Z6 312 aa16.15■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms