RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Cby1Q9D1C2 127 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Tmem183Q9JJB9 375 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm5129F6YHA9 99 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ly86O88188 162 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 P0C1Z5 52 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 F7P70375 446 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 ErasQ7TN89 227 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Olfr1030Q8VFL5 318 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gatad1Q920S3 266 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Rchy1Q9CR50 261 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ighv5-16A0A0B4J1P4 117 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ighv1-77A0A0G2JGS9 117 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm42420A0A0J9YUQ2 99 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Zfp931A2AHM2 298 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Psg25Q497W1 475 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Smim19Q80ZU4 107 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Srsf12Q8C8K3 266 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Cox19Q8K0C8 92 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Bex1Q9R224 128 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 A730046J19RikA0A1B0GSN8 89 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Plcxd2B2RXA1 340 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Bloc1s1O55102 125 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Atp6v0cP63082 155 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gpr183Q3U6B2 357 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 PgpQ8CHP8 321 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Cma2Q91VB1 246 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Rpl11Q9CXW4 178 aaKnown RBP6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Wfdc15bQ9JHY4 80 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 IgipA0A1B0GR74 53 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm45800A0A1B0GT24 152 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Rsg1A2A825 258 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm21060J3KMU4 56 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Evi2aP20934 223 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Timp3P39876 211 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Plp1P60202 277 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Rhox4gQ2MDF7 205 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Crebl2Q32M00 123 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Arl11Q6P3A9 176 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gpr87Q99MT7 358 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Mrpl33Q9CQP0 65 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Rbm7Q9CQT2 265 aaKnown RBP6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Spaca3Q9D9X8 221 aa6.72□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ighv9-4A0A0A6YWH6 117 aa6.71□□□□□ -1.33
Trim39-201ENSMUST00000042717 SelplgQ62170 397 aa6.71□□□□□ -1.33
Trim39-201ENSMUST00000042717 Olfr996Q7TRA0 314 aa6.71□□□□□ -1.33
Trim39-201ENSMUST00000042717 5930422O12RikQ8C4Y4 123 aa6.71□□□□□ -1.33
Trim39-201ENSMUST00000042717 Hist3h2bbQ8CGP0 126 aa6.71□□□□□ -1.33
Trim39-201ENSMUST00000042717 Olfr968Q8VFN4 314 aa6.71□□□□□ -1.33
Trim39-201ENSMUST00000042717 Hist3h2baQ9D2U9 126 aa6.71□□□□□ -1.33
Trim39-201ENSMUST00000042717 ManbalQ9D8X0 85 aa6.71□□□□□ -1.33
Trim39-201ENSMUST00000042717 Cst10Q9JM84 148 aa6.71□□□□□ -1.33
Trim39-201ENSMUST00000042717 Trav21-dv12A0A075B6C4 109 aa6.71□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1024A2ASU7 327 aa6.71□□□□□ -1.34
Trim39-201ENSMUST00000042717 Rhox7bA6PW38 321 aa6.71□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm21616B6ZB74 166 aa6.71□□□□□ -1.34
Trim39-201ENSMUST00000042717 Fabp4P04117 132 aa6.71□□□□□ -1.34
Trim39-201ENSMUST00000042717 Fgf5P15656 264 aa6.71□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr150Q60895 312 aa6.71□□□□□ -1.34
Trim39-201ENSMUST00000042717 Cmtm2bQ9DAC0 210 aa6.71□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1192-ps1A0A1L1SRD7 309 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm3072F6SKY8 209 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm17654F7AXR3 209 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr624F8VQI7 308 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ccl1P10146 92 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Rpl23P62830 140 aaKnown RBP6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 H2-DMb2Q31099 261 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1441Q8VFV3 318 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Lyg1Q9D7Q0 197 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ctnnbip1Q9JJN6 81 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm10553J3QPF1 123 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm10251J3QPM5 127 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 P01801 115 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 P01802 115 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr963Q7TRA9 311 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ndfip1Q8R0W6 221 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr477Q8VGI6 310 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Fam241aQ9CZL2 131 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Shisa9Q9CZN4 424 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm2916Q9D9B9 127 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm27027S4R1M6 97 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm3233E9Q2H5 230 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Rps10P63325 165 aaKnown RBP6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Crisp3Q03402 241 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Trav15-1-dv6-1Q5R1D2 117 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1440Q8VFV4 315 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr33Q8VGX7 318 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Avpi1Q9D7H4 142 aa6.7□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ighv1-16A0A075B5U1 98 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Trav6-4A0A075B6B4 115 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm6096D3YTY6 151 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ebi3O35228 228 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Tnfsf11O35235 316 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 CrygbP04344 175 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Rnase9P60154 184 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ube2g1P62254 170 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Rhox4dQ2MDG0 205 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Oraov1Q8CH62 137 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1475Q8VEV6 314 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr810Q8VFH9 312 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Tppp3Q9CRB6 176 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms