RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 UBE2DNLQ8IWF7 75 aa11.49□□□□□ -0.57
PHGDH-234ENST00000642041 PGPEP1Q9NXJ5 209 aa11.49□□□□□ -0.57
PHGDH-234ENST00000642041 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
PHGDH-234ENST00000642041 C1orf134Q5TEV5 83 aa11.47□□□□□ -0.57
PHGDH-234ENST00000642041 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-234ENST00000642041 NDUFC2O95298 119 aa11.46□□□□□ -0.57
PHGDH-234ENST00000642041 MIR7-3HGQ8N6C7 128 aa11.46□□□□□ -0.57
PHGDH-234ENST00000642041 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
PHGDH-234ENST00000642041 K7EP34 96 aa11.45□□□□□ -0.58
PHGDH-234ENST00000642041 INAFM2P0DMQ5 153 aa11.45□□□□□ -0.58
PHGDH-234ENST00000642041 Q8N3U1 123 aa11.45□□□□□ -0.58
PHGDH-234ENST00000642041 SPCS1Q9Y6A9 102 aa11.45□□□□□ -0.58
PHGDH-234ENST00000642041 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
PHGDH-234ENST00000642041 CBY1Q9Y3M2 126 aa11.44□□□□□ -0.58
PHGDH-234ENST00000642041 FAT1Q14517 4588 aa11.44□□□□□ -0.58
PHGDH-234ENST00000642041 EPM2AB3EWF7 344 aa11.43□□□□□ -0.58
PHGDH-234ENST00000642041 Q1RN00 199 aa11.43□□□□□ -0.58
PHGDH-234ENST00000642041 KRTAP26-1Q6PEX3 210 aa11.43□□□□□ -0.58
PHGDH-234ENST00000642041 SND1-IT1Q9HBX3 110 aa11.43□□□□□ -0.58
PHGDH-234ENST00000642041 K7ERJ3 54 aa11.42□□□□□ -0.58
PHGDH-234ENST00000642041 SCGB1C2P0DMR2 95 aa11.42□□□□□ -0.58
PHGDH-234ENST00000642041 PSMB2P49721 201 aa11.42□□□□□ -0.58
PHGDH-234ENST00000642041 TNP2Q05952 138 aa11.42□□□□□ -0.58
PHGDH-234ENST00000642041 TSPAN13O95857 204 aa11.41□□□□□ -0.58
PHGDH-234ENST00000642041 PFN2P35080 140 aa11.41□□□□□ -0.58
PHGDH-234ENST00000642041 CAMK2N2Q96S95 79 aa11.41□□□□□ -0.58
PHGDH-234ENST00000642041 PKIGQ9Y2B9 76 aa11.41□□□□□ -0.58
PHGDH-234ENST00000642041 FLG2Q5D862 2391 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-234ENST00000642041 C14orf177Q52M58 125 aa11.4□□□□□ -0.58
PHGDH-234ENST00000642041 F8W1H4 67 aa11.39□□□□□ -0.59
PHGDH-234ENST00000642041 A0A0U1RRA0 63 aa11.38□□□□□ -0.59
PHGDH-234ENST00000642041 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
PHGDH-234ENST00000642041 DAND5Q8N907 189 aa11.37□□□□□ -0.59
PHGDH-234ENST00000642041 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
PHGDH-234ENST00000642041 SNCGO76070 127 aa11.35□□□□□ -0.59
PHGDH-234ENST00000642041 NPC2P61916 151 aa11.35□□□□□ -0.59
PHGDH-234ENST00000642041 SYCNQ0VAF6 134 aa11.35□□□□□ -0.59
PHGDH-234ENST00000642041 ATXN8Q156A1 80 aa11.35□□□□□ -0.59
PHGDH-234ENST00000642041 TMEM126AQ9H061 195 aa11.35□□□□□ -0.59
PHGDH-234ENST00000642041 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
PHGDH-234ENST00000642041 H0YGX0 51 aa11.34□□□□□ -0.59
PHGDH-234ENST00000642041 RPL13AP40429 203 aaKnown RBP11.34□□□□□ -0.59
PHGDH-234ENST00000642041 UNQ6190/PRO20217Q6UXQ8 127 aa11.34□□□□□ -0.59
PHGDH-234ENST00000642041 SOSTDC1Q6X4U4 206 aa11.34□□□□□ -0.59
PHGDH-234ENST00000642041 Q9HAA7 133 aa11.34□□□□□ -0.59
PHGDH-234ENST00000642041 NDUFC2-KCTD14E9PQ53 114 aa11.33□□□□□ -0.6
PHGDH-234ENST00000642041 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
PHGDH-234ENST00000642041 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
PHGDH-234ENST00000642041 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
PHGDH-234ENST00000642041 HMCN2Q8NDA2 5059 aa11.31□□□□□ -0.6
PHGDH-234ENST00000642041 M0QXV9 152 aa11.31□□□□□ -0.6
PHGDH-234ENST00000642041 PSCAO43653 123 aa11.3□□□□□ -0.6
PHGDH-234ENST00000642041 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
PHGDH-234ENST00000642041 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
PHGDH-234ENST00000642041 NBDYA0A0U1RRE5 68 aa11.28□□□□□ -0.6
PHGDH-234ENST00000642041 USP17L23D6RBM5 183 aa11.28□□□□□ -0.6
PHGDH-234ENST00000642041 H7C2G1 150 aa11.28□□□□□ -0.6
PHGDH-234ENST00000642041 HIGD2BQ4VC39 106 aa11.28□□□□□ -0.6
PHGDH-234ENST00000642041 C6orf223Q8N319 242 aa11.28□□□□□ -0.6
PHGDH-234ENST00000642041 NAA38Q9BRA0 125 aaKnown RBP11.28□□□□□ -0.6
PHGDH-234ENST00000642041 A0A1B0GX51 115 aa11.27□□□□□ -0.61
PHGDH-234ENST00000642041 TRIAP1O43715 76 aa11.26□□□□□ -0.61
PHGDH-234ENST00000642041 EIF4EBP3O60516 100 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-234ENST00000642041 C10orf25Q5T742 122 aa11.26□□□□□ -0.61
PHGDH-234ENST00000642041 Q6ZRU5 148 aa11.26□□□□□ -0.61
PHGDH-234ENST00000642041 OR13C6PQ8NH95 151 aa11.26□□□□□ -0.61
PHGDH-234ENST00000642041 IGKV2-28A0A075B6P5 120 aa11.25□□□□□ -0.61
PHGDH-234ENST00000642041 H3BMG7 143 aa11.25□□□□□ -0.61
PHGDH-234ENST00000642041 IGKV2D-28P01615 120 aa11.25□□□□□ -0.61
PHGDH-234ENST00000642041 S100A7L2Q5SY68 101 aa11.25□□□□□ -0.61
PHGDH-234ENST00000642041 Q5VSD8 79 aa11.25□□□□□ -0.61
PHGDH-234ENST00000642041 PLA2G2DQ9UNK4 145 aa11.25□□□□□ -0.61
PHGDH-234ENST00000642041 J3QR89 54 aa11.24□□□□□ -0.61
PHGDH-234ENST00000642041 GHRHP01286 108 aa11.24□□□□□ -0.61
PHGDH-234ENST00000642041 TRACP01848 142 aa11.24□□□□□ -0.61
PHGDH-234ENST00000642041 LINC01600Q96MT4 127 aa11.24□□□□□ -0.61
PHGDH-234ENST00000642041 H3BQ85 93 aa11.23□□□□□ -0.61
PHGDH-234ENST00000642041 J3QL48 77 aa11.23□□□□□ -0.61
PHGDH-234ENST00000642041 TCL1BO95988 128 aa11.23□□□□□ -0.61
PHGDH-234ENST00000642041 KRTAP10-2P60368 255 aa11.23□□□□□ -0.61
PHGDH-234ENST00000642041 CNBPP62633 177 aaKnown RBP11.23□□□□□ -0.61
PHGDH-234ENST00000642041 LINC00337Q8N6G1 96 aa11.23□□□□□ -0.61
PHGDH-234ENST00000642041 LOC107984640A0A0U1RRK4 108 aa11.22□□□□□ -0.61
PHGDH-234ENST00000642041 LST1O00453 97 aa11.22□□□□□ -0.61
PHGDH-234ENST00000642041 C9orf116Q5BN46 136 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-234ENST00000642041 KRTAP1-5Q9BYS1 174 aa11.22□□□□□ -0.61
PHGDH-234ENST00000642041 H3BT86 120 aa11.2□□□□□ -0.62
PHGDH-234ENST00000642041 M0R378 163 aa11.2□□□□□ -0.62
PHGDH-234ENST00000642041 LINC00526Q96FQ7 95 aa11.2□□□□□ -0.62
PHGDH-234ENST00000642041 K7ERU9 68 aa11.19□□□□□ -0.62
PHGDH-234ENST00000642041 LINC01620Q4KN68 170 aa11.19□□□□□ -0.62
PHGDH-234ENST00000642041 TRBV7-6A0A0J9YX20 115 aa11.18□□□□□ -0.62
PHGDH-234ENST00000642041 XGP55808 180 aa11.18□□□□□ -0.62
PHGDH-234ENST00000642041 SMIM11BQ8TCY0 68 aa11.18□□□□□ -0.62
PHGDH-234ENST00000642041 SLC25A20O43772 301 aa11.17□□□□□ -0.62
PHGDH-234ENST00000642041 DNAL4O96015 105 aa11.17□□□□□ -0.62
PHGDH-234ENST00000642041 IGLV6-57P01721 117 aa11.16□□□□□ -0.62
PHGDH-234ENST00000642041 SERTAD4-AS1Q5TG53 156 aa11.15□□□□□ -0.62
PHGDH-234ENST00000642041 ANKRD29Q8N6D5 301 aa11.15□□□□□ -0.62
PHGDH-234ENST00000642041 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms