RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 LOC110117498A0A087WWA1 95 aa13.53□□□□□ -0.24
KCNMA1-293ENST00000640969 PHF5AQ7RTV0 110 aaKnown RBP13.53□□□□□ -0.24
KCNMA1-293ENST00000640969 NCOR2Q9Y618 2525 aa13.52□□□□□ -0.25
KCNMA1-293ENST00000640969 Q6ZRX8 168 aa13.52□□□□□ -0.25
KCNMA1-293ENST00000640969 CCDC168Q8NDH2 2452 aa13.52□□□□□ -0.25
KCNMA1-293ENST00000640969 Q8NBF4 154 aa13.51□□□□□ -0.25
KCNMA1-293ENST00000640969 ABCA2Q9BZC7 2435 aa13.5□□□□□ -0.25
KCNMA1-293ENST00000640969 H3BPC8 53 aa13.49□□□□□ -0.25
KCNMA1-293ENST00000640969 ST20-AS1Q8NBB2 130 aa13.49□□□□□ -0.25
KCNMA1-293ENST00000640969 EPM2AB3EWF7 344 aa13.47□□□□□ -0.25
KCNMA1-293ENST00000640969 RPL37AP61513 92 aaKnown RBP13.47□□□□□ -0.25
KCNMA1-293ENST00000640969 H3BNG1 76 aa13.47□□□□□ -0.25
KCNMA1-293ENST00000640969 TM2D3Q9BRN9 247 aa13.47□□□□□ -0.25
KCNMA1-293ENST00000640969 RPS28P62857 69 aaKnown RBP13.47□□□□□ -0.25
KCNMA1-293ENST00000640969 LINC00313P59037 77 aa13.47□□□□□ -0.25
KCNMA1-293ENST00000640969 SERTAD4-AS1Q5TG53 156 aa13.46□□□□□ -0.25
KCNMA1-293ENST00000640969 TRAV22A0A0B4J277 110 aa13.45□□□□□ -0.26
KCNMA1-293ENST00000640969 CHTF8P0CG12 524 aa13.45□□□□□ -0.26
KCNMA1-293ENST00000640969 ATP11AUNQ6ZP68 121 aa13.44□□□□□ -0.26
KCNMA1-293ENST00000640969 RTL8CO15255 209 aa13.42□□□□□ -0.26
KCNMA1-293ENST00000640969 IGLV8-61A0A075B6I0 122 aa13.42□□□□□ -0.26
KCNMA1-293ENST00000640969 C16orf90A8MZG2 172 aa13.4□□□□□ -0.26
KCNMA1-293ENST00000640969 TET2Q6N021 2002 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-293ENST00000640969 TYMSOSQ8TAI1 123 aa13.38□□□□□ -0.27
KCNMA1-293ENST00000640969 PIEZO2Q9H5I5 2752 aa13.37□□□□□ -0.27
KCNMA1-293ENST00000640969 IGF2RP11717 2491 aa13.37□□□□□ -0.27
KCNMA1-293ENST00000640969 Q6ZRP5 223 aa13.36□□□□□ -0.27
KCNMA1-293ENST00000640969 C8orf87E5RJ46 101 aa13.36□□□□□ -0.27
KCNMA1-293ENST00000640969 GVQW2A0A096LPI5 108 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-293ENST00000640969 LINC00588Q9Y4M8 146 aa13.34□□□□□ -0.27
KCNMA1-293ENST00000640969 NBDYA0A0U1RRE5 68 aa13.34□□□□□ -0.27
KCNMA1-293ENST00000640969 PLA2G1BP04054 148 aaKnown RBP13.34□□□□□ -0.27
KCNMA1-293ENST00000640969 LITAFQ99732 161 aa13.34□□□□□ -0.27
KCNMA1-293ENST00000640969 Q96NJ1 140 aa13.34□□□□□ -0.27
KCNMA1-293ENST00000640969 Q8NAQ8 132 aa13.32□□□□□ -0.28
KCNMA1-293ENST00000640969 TRBV7-4A0A0J9YYF1 115 aa13.32□□□□□ -0.28
KCNMA1-293ENST00000640969 DOPEY1Q5JWR5 2465 aa13.31□□□□□ -0.28
KCNMA1-293ENST00000640969 PTPRBP23467 1997 aa13.3□□□□□ -0.28
KCNMA1-293ENST00000640969 LOC101927531A0A1B0GV80 90 aa13.3□□□□□ -0.28
KCNMA1-293ENST00000640969 SPINT4Q6UDR6 99 aa13.3□□□□□ -0.28
KCNMA1-293ENST00000640969 A8MWP4 228 aa13.29□□□□□ -0.28
KCNMA1-293ENST00000640969 FAM168BA1KXE4 195 aa13.29□□□□□ -0.28
KCNMA1-293ENST00000640969 IGLV6-57P01721 117 aa13.29□□□□□ -0.28
KCNMA1-293ENST00000640969 FAM229AH3BQW9 127 aa13.29□□□□□ -0.28
KCNMA1-293ENST00000640969 K7EQZ3 153 aa13.29□□□□□ -0.28
KCNMA1-293ENST00000640969 VPREB1P12018 145 aa13.28□□□□□ -0.28
KCNMA1-293ENST00000640969 MUC4Q99102 2169 aa13.25□□□□□ -0.29
KCNMA1-293ENST00000640969 COA5Q86WW8 74 aa13.25□□□□□ -0.29
KCNMA1-293ENST00000640969 KRTAP24-1Q3LI83 254 aa13.24□□□□□ -0.29
KCNMA1-293ENST00000640969 MRPL34Q9BQ48 92 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-293ENST00000640969 MYO9AB2RTY4 2548 aa13.24□□□□□ -0.29
KCNMA1-293ENST00000640969 TLN1Q9Y490 2541 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-293ENST00000640969 COL27A1Q8IZC6 1860 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-293ENST00000640969 LINC01600Q96MT4 127 aa13.21□□□□□ -0.3
KCNMA1-293ENST00000640969 COL4A2P08572 1712 aa13.2□□□□□ -0.3
KCNMA1-293ENST00000640969 A8MUN3 132 aa13.2□□□□□ -0.3
KCNMA1-293ENST00000640969 ERC2-IT1O76042 136 aa13.2□□□□□ -0.3
KCNMA1-293ENST00000640969 IGLV1-50A0A075B6I6 118 aa13.19□□□□□ -0.3
KCNMA1-293ENST00000640969 DNAH10OSP0CZ25 163 aa13.19□□□□□ -0.3
KCNMA1-293ENST00000640969 SSBP3-AS1Q7Z2R9 100 aa13.17□□□□□ -0.3
KCNMA1-293ENST00000640969 KCNQ1DNQ9H478 68 aa13.14□□□□□ -0.31
KCNMA1-293ENST00000640969 CYP4F30PQ9H0H9 118 aa13.13□□□□□ -0.31
KCNMA1-293ENST00000640969 IGFL1Q6UW32 110 aa13.13□□□□□ -0.31
KCNMA1-293ENST00000640969 KLK9Q2XQG4 91 aa13.13□□□□□ -0.31
KCNMA1-293ENST00000640969 DSCR10P59022 87 aa13.12□□□□□ -0.31
KCNMA1-293ENST00000640969 LINC00528Q8N1L1 170 aa13.11□□□□□ -0.31
KCNMA1-293ENST00000640969 UQCR11O14957 56 aa13.11□□□□□ -0.31
KCNMA1-293ENST00000640969 C8orf17Q9NRJ1 99 aa13.08□□□□□ -0.32
KCNMA1-293ENST00000640969 EIF4EBP3O60516 100 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-293ENST00000640969 PRR15Q8IV56 129 aa13.06□□□□□ -0.32
KCNMA1-293ENST00000640969 APLNQ9ULZ1 77 aa13.06□□□□□ -0.32
KCNMA1-293ENST00000640969 CSNK1G2-AS1Q8NCQ2 148 aa13.05□□□□□ -0.32
KCNMA1-293ENST00000640969 JMJD1CQ15652 2540 aa13.04□□□□□ -0.32
KCNMA1-293ENST00000640969 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
KCNMA1-293ENST00000640969 MIR22HGQ0VDD5 57 aa13.03□□□□□ -0.32
KCNMA1-293ENST00000640969 ABCA12Q86UK0 2595 aa13.03□□□□□ -0.32
KCNMA1-293ENST00000640969 CHD8Q9HCK8 2581 aa13.02□□□□□ -0.33
KCNMA1-293ENST00000640969 C15orf56Q8N910 161 aa13.02□□□□□ -0.33
KCNMA1-293ENST00000640969 FN1P02751 2386 aaKnown RBP13.01□□□□□ -0.33
KCNMA1-293ENST00000640969 ZFYVE26Q68DK2 2539 aa13.01□□□□□ -0.33
KCNMA1-293ENST00000640969 A0A1B0GVX0 72 aa13.01□□□□□ -0.33
KCNMA1-293ENST00000640969 KLKP1Q107X0 134 aa13□□□□□ -0.33
KCNMA1-293ENST00000640969 Q8N377 158 aa13□□□□□ -0.33
KCNMA1-293ENST00000640969 WWC2-AS2Q96NR7 200 aa13□□□□□ -0.33
KCNMA1-293ENST00000640969 C9orf129Q5T035 196 aaKnown RBP12.99□□□□□ -0.33
KCNMA1-293ENST00000640969 OBSCN-AS1Q96MR7 158 aa12.99□□□□□ -0.33
KCNMA1-293ENST00000640969 CEP295Q9C0D2 2601 aa12.98□□□□□ -0.33
KCNMA1-293ENST00000640969 CRIPTQ9P021 101 aa12.98□□□□□ -0.33
KCNMA1-293ENST00000640969 A0A0G2JQZ4 141 aa12.98□□□□□ -0.33
KCNMA1-293ENST00000640969 A0A1W2PNN7 141 aa12.98□□□□□ -0.33
KCNMA1-293ENST00000640969 PRR34Q9NV39 138 aa12.97□□□□□ -0.33
KCNMA1-293ENST00000640969 C9orf92A6NGG3 77 aa12.96□□□□□ -0.33
KCNMA1-293ENST00000640969 J3QL48 77 aa12.96□□□□□ -0.34
KCNMA1-293ENST00000640969 LINC00304Q8N9R0 145 aa12.96□□□□□ -0.34
KCNMA1-293ENST00000640969 COX6B2Q6YFQ2 88 aa12.95□□□□□ -0.34
KCNMA1-293ENST00000640969 TLN2Q9Y4G6 2542 aa12.95□□□□□ -0.34
KCNMA1-293ENST00000640969 ZNF861PO60384 105 aa12.94□□□□□ -0.34
KCNMA1-293ENST00000640969 KRTAP10-11P60412 298 aa12.94□□□□□ -0.34
KCNMA1-293ENST00000640969 USP9XQ93008 2570 aaPredicted RBP12.92□□□□□ -0.34
KCNMA1-293ENST00000640969 H7BZZ5 65 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms