RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 HBBP68871 147 aa4.32□□□□□ -1.72
SCARB2-226ENST00000640916 LINC01551Q86U37 167 aa4.32□□□□□ -1.72
SCARB2-226ENST00000640916 AMN1Q8IY45 258 aa4.32□□□□□ -1.72
SCARB2-226ENST00000640916 SPRR4Q96PI1 79 aa4.32□□□□□ -1.72
SCARB2-226ENST00000640916 TMEM191AQ9H0A3 160 aa4.32□□□□□ -1.72
SCARB2-226ENST00000640916 BIN3Q9NQY0 253 aa4.32□□□□□ -1.72
SCARB2-226ENST00000640916 IGKV2-28A0A075B6P5 120 aa4.31□□□□□ -1.72
SCARB2-226ENST00000640916 IGKV2D-28P01615 120 aa4.31□□□□□ -1.72
SCARB2-226ENST00000640916 RPS29P62273 56 aaKnown RBP4.31□□□□□ -1.72
SCARB2-226ENST00000640916 RPL24P83731 157 aaKnown RBP4.31□□□□□ -1.72
SCARB2-226ENST00000640916 ADIRFQ15847 76 aa4.31□□□□□ -1.72
SCARB2-226ENST00000640916 COX6B2Q6YFQ2 88 aa4.31□□□□□ -1.72
SCARB2-226ENST00000640916 URB1-AS1Q96HZ7 61 aa4.31□□□□□ -1.72
SCARB2-226ENST00000640916 TMEM126AQ9H061 195 aa4.31□□□□□ -1.72
SCARB2-226ENST00000640916 SPANXA1Q9NS26 97 aa4.31□□□□□ -1.72
SCARB2-226ENST00000640916 NDUFA12Q9UI09 145 aa4.31□□□□□ -1.72
SCARB2-226ENST00000640916 NEBP20929 6669 aa4.31□□□□□ -1.72
SCARB2-226ENST00000640916 M0R378 163 aa4.3□□□□□ -1.72
SCARB2-226ENST00000640916 RPL23P62829 140 aaKnown RBP4.3□□□□□ -1.72
SCARB2-226ENST00000640916 CBLN2Q8IUK8 224 aa4.3□□□□□ -1.72
SCARB2-226ENST00000640916 Q8IZM0 81 aa4.3□□□□□ -1.72
SCARB2-226ENST00000640916 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
SCARB2-226ENST00000640916 HIGD1CA8MV81 97 aa4.29□□□□□ -1.72
SCARB2-226ENST00000640916 CKS1BP61024 79 aa4.29□□□□□ -1.72
SCARB2-226ENST00000640916 FAM231DQ6ZW35 169 aa4.29□□□□□ -1.72
SCARB2-226ENST00000640916 FAM19A2Q8N3H0 131 aa4.29□□□□□ -1.72
SCARB2-226ENST00000640916 TOMM7Q9P0U1 55 aa4.29□□□□□ -1.72
SCARB2-226ENST00000640916 V9GYV3 84 aa4.29□□□□□ -1.72
SCARB2-226ENST00000640916 IGLV4-3A0A075B6K6 122 aa4.28□□□□□ -1.72
SCARB2-226ENST00000640916 A8MWL6 223 aa4.28□□□□□ -1.72
SCARB2-226ENST00000640916 SLC25A20O43772 301 aa4.28□□□□□ -1.72
SCARB2-226ENST00000640916 PEA15Q15121 130 aa4.28□□□□□ -1.72
SCARB2-226ENST00000640916 BORCS7Q96B45 105 aa4.28□□□□□ -1.72
SCARB2-226ENST00000640916 HIGD2AQ9BW72 106 aa4.28□□□□□ -1.72
SCARB2-226ENST00000640916 GNB1LQ9BYB4 327 aa4.28□□□□□ -1.72
SCARB2-226ENST00000640916 NAT8Q9UHE5 227 aa4.28□□□□□ -1.72
SCARB2-226ENST00000640916 F8VRH5 84 aa4.27□□□□□ -1.73
SCARB2-226ENST00000640916 PRSS2P07478 247 aa4.27□□□□□ -1.73
SCARB2-226ENST00000640916 ZC2HC1BQ5TFG8 222 aa4.27□□□□□ -1.73
SCARB2-226ENST00000640916 MRPL54Q6P161 138 aaKnown RBP4.27□□□□□ -1.73
SCARB2-226ENST00000640916 Q6ZN92 141 aa4.27□□□□□ -1.73
SCARB2-226ENST00000640916 OSTCQ9NRP0 149 aa4.27□□□□□ -1.73
SCARB2-226ENST00000640916 SPANXB1Q9NS25 103 aaPredicted RBP4.27□□□□□ -1.73
SCARB2-226ENST00000640916 TRBV24-1A0A075B6N3 115 aa4.26□□□□□ -1.73
SCARB2-226ENST00000640916 A0A1B0GUT8 65 aa4.26□□□□□ -1.73
SCARB2-226ENST00000640916 PPP1R17O96001 155 aa4.26□□□□□ -1.73
SCARB2-226ENST00000640916 CD164Q04900 197 aa4.26□□□□□ -1.73
SCARB2-226ENST00000640916 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
SCARB2-226ENST00000640916 MTURNQ8N3F0 131 aa4.26□□□□□ -1.73
SCARB2-226ENST00000640916 NKAPP1Q8N9T2 125 aa4.26□□□□□ -1.73
SCARB2-226ENST00000640916 TINCRA0A1B0GVN0 87 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 TCAPO15273 167 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 MT2AP02795 61 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 IFITM2Q01629 132 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 MRPL51Q4U2R6 128 aaKnown RBP4.25□□□□□ -1.73
SCARB2-226ENST00000640916 Q8NDZ9 215 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 FAM218AQ96MZ4 157 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 C20orf78Q9BR46 151 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 NAT8BQ9UHF3 227 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 PYGO1Q9Y3Y4 419 aa4.25□□□□□ -1.73
SCARB2-226ENST00000640916 LINC00483Q53H64 154 aa4.24□□□□□ -1.73
SCARB2-226ENST00000640916 FAM19A3Q7Z5A8 133 aa4.24□□□□□ -1.73
SCARB2-226ENST00000640916 AMELXQ99217 191 aa4.24□□□□□ -1.73
SCARB2-226ENST00000640916 SMIM27A0A1W2PRY6 76 aa4.23□□□□□ -1.73
SCARB2-226ENST00000640916 MT1FP04733 61 aa4.23□□□□□ -1.73
SCARB2-226ENST00000640916 TMEM141Q96I45 108 aa4.23□□□□□ -1.73
SCARB2-226ENST00000640916 SMIM2Q9BVW6 85 aa4.23□□□□□ -1.73
SCARB2-226ENST00000640916 CDKN2A-AS1Q9UH64 79 aa4.23□□□□□ -1.73
SCARB2-226ENST00000640916 A0A1B0GV72 72 aa4.22□□□□□ -1.73
SCARB2-226ENST00000640916 ADCYAP1P18509 176 aa4.22□□□□□ -1.73
SCARB2-226ENST00000640916 S100A1P23297 94 aa4.22□□□□□ -1.73
SCARB2-226ENST00000640916 IFI27P40305 119 aaPredicted RBP4.22□□□□□ -1.73
SCARB2-226ENST00000640916 RAB5BP61020 215 aa4.22□□□□□ -1.73
SCARB2-226ENST00000640916 MOBPQ13875 183 aa4.22□□□□□ -1.73
SCARB2-226ENST00000640916 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
SCARB2-226ENST00000640916 CLLU1Q5K131 121 aa4.22□□□□□ -1.73
SCARB2-226ENST00000640916 FAM104BQ5XKR9 115 aa4.22□□□□□ -1.73
SCARB2-226ENST00000640916 SSBP3-AS1Q7Z2R9 100 aa4.22□□□□□ -1.73
SCARB2-226ENST00000640916 ZNF706Q9Y5V0 76 aaPredicted RBP4.22□□□□□ -1.73
SCARB2-226ENST00000640916 A0A1B0GWB2 263 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 D6R8Y8 96 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 NPYP01303 97 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 RAB5AP20339 215 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 CKS2P33552 79 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 CXCL5P42830 114 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 C2orf66Q6UXQ4 117 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 TEX43Q6ZNM6 134 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 COMMD7Q86VX2 200 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 Q8N9P0 234 aaPredicted RBP4.21□□□□□ -1.74
SCARB2-226ENST00000640916 SMCR5Q8TEV8 140 aa4.21□□□□□ -1.74
SCARB2-226ENST00000640916 IGLV5-45A0A087WSX0 123 aa4.2□□□□□ -1.74
SCARB2-226ENST00000640916 LOC389332A0A1B0GUA5 103 aa4.2□□□□□ -1.74
SCARB2-226ENST00000640916 A0A1B0GXF2 115 aa4.2□□□□□ -1.74
SCARB2-226ENST00000640916 LINC00862A6NCI5 91 aa4.2□□□□□ -1.74
SCARB2-226ENST00000640916 A6NDN8 102 aa4.2□□□□□ -1.74
SCARB2-226ENST00000640916 SMIM1B2RUZ4 78 aa4.2□□□□□ -1.74
SCARB2-226ENST00000640916 F8W036 122 aa4.2□□□□□ -1.74
SCARB2-226ENST00000640916 C4orf26Q17RF5 130 aa4.2□□□□□ -1.74
SCARB2-226ENST00000640916 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms