RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 IGKV3OR2-268A0A0C4DH90 116 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 F8VRH5 84 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 UBE2D1P51668 147 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 REG3AQ06141 175 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 CLPSL2Q6UWE3 100 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 DPH3Q96FX2 82 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 LINC00959A0A1B0GUT2 108 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 PSPHP1O15172 72 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 ADAMTSL4-AS1Q5T5F5 129 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
SCARB2-220ENST00000640076 ENHOQ6UWT2 76 aa5.32□□□□□ -1.56
SCARB2-220ENST00000640076 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
SCARB2-220ENST00000640076 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
SCARB2-220ENST00000640076 UBE2WQ96B02 151 aa5.32□□□□□ -1.56
SCARB2-220ENST00000640076 C11orf86A6NJI1 115 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 IGLC3P0DOY3 106 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 PLNP26678 52 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 NKAPP1Q8N9T2 125 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 SPANXDQ9BXN6 97 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 DNAH6Q9C0G6 4158 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 IGKCP01834 107 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 CRPP02741 224 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 LINC01547P58512 204 aaPredicted RBP5.31□□□□□ -1.56
SCARB2-220ENST00000640076 ATOH7Q8N100 152 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 C10orf126Q8N4M7 172 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 CHAC1Q9BUX1 264 aa5.31□□□□□ -1.56
SCARB2-220ENST00000640076 KMT2AQ03164 3969 aa5.3□□□□□ -1.56
SCARB2-220ENST00000640076 IBA57-AS1B1ANH7 110 aa5.3□□□□□ -1.56
SCARB2-220ENST00000640076 INAFM2P0DMQ5 153 aa5.3□□□□□ -1.56
SCARB2-220ENST00000640076 FABP2P12104 132 aa5.3□□□□□ -1.56
SCARB2-220ENST00000640076 SEC11AP67812 179 aa5.3□□□□□ -1.56
SCARB2-220ENST00000640076 COX6A2Q02221 97 aa5.3□□□□□ -1.56
SCARB2-220ENST00000640076 SS18Q15532 418 aa5.3□□□□□ -1.56
SCARB2-220ENST00000640076 MIAQ16674 131 aa5.3□□□□□ -1.56
SCARB2-220ENST00000640076 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
SCARB2-220ENST00000640076 IGLV10-54A0A075B6I4 117 aa5.29□□□□□ -1.56
SCARB2-220ENST00000640076 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
SCARB2-220ENST00000640076 A8MUN3 132 aa5.29□□□□□ -1.56
SCARB2-220ENST00000640076 XCL1P47992 114 aa5.29□□□□□ -1.56
SCARB2-220ENST00000640076 TMEM258P61165 79 aa5.29□□□□□ -1.56
SCARB2-220ENST00000640076 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
SCARB2-220ENST00000640076 LST1O00453 97 aa5.29□□□□□ -1.56
SCARB2-220ENST00000640076 ZNF22P17026 224 aaPredicted RBP5.29□□□□□ -1.56
SCARB2-220ENST00000640076 KIAA0087Q14695 138 aa5.29□□□□□ -1.56
SCARB2-220ENST00000640076 CDKN2A-AS1Q9UH64 79 aa5.29□□□□□ -1.56
SCARB2-220ENST00000640076 LY6G6CO95867 125 aa5.28□□□□□ -1.56
SCARB2-220ENST00000640076 LINC00313P59037 77 aa5.28□□□□□ -1.56
SCARB2-220ENST00000640076 TMEM170BQ5T4T1 132 aa5.28□□□□□ -1.56
SCARB2-220ENST00000640076 KRTAP26-1Q6PEX3 210 aa5.28□□□□□ -1.56
SCARB2-220ENST00000640076 TRBV7-6A0A0J9YX20 115 aa5.27□□□□□ -1.57
SCARB2-220ENST00000640076 TAX1BP3O14907 124 aa5.27□□□□□ -1.57
SCARB2-220ENST00000640076 PRR4Q16378 134 aa5.27□□□□□ -1.57
SCARB2-220ENST00000640076 C9orf153Q5TBE3 101 aa5.27□□□□□ -1.57
SCARB2-220ENST00000640076 SLC25A34Q6PIV7 304 aa5.27□□□□□ -1.57
SCARB2-220ENST00000640076 IGKV2D-24A0A075B6R9 120 aa5.27□□□□□ -1.57
SCARB2-220ENST00000640076 NMUP48645 174 aa5.27□□□□□ -1.57
SCARB2-220ENST00000640076 C5orf38Q86SI9 138 aa5.27□□□□□ -1.57
SCARB2-220ENST00000640076 ZNF706Q9Y5V0 76 aaPredicted RBP5.27□□□□□ -1.57
SCARB2-220ENST00000640076 SACSQ9NZJ4 4579 aa5.26□□□□□ -1.57
SCARB2-220ENST00000640076 DNAH10Q8IVF4 4471 aa5.26□□□□□ -1.57
SCARB2-220ENST00000640076 TMEM223A0PJW6 202 aa5.26□□□□□ -1.57
SCARB2-220ENST00000640076 H3BMG7 143 aa5.26□□□□□ -1.57
SCARB2-220ENST00000640076 H3BRM9 83 aa5.26□□□□□ -1.57
SCARB2-220ENST00000640076 MT-ATP8P03928 68 aa5.26□□□□□ -1.57
SCARB2-220ENST00000640076 UQCR10Q9UDW1 63 aa5.26□□□□□ -1.57
SCARB2-220ENST00000640076 COX7A2LO14548 114 aa5.25□□□□□ -1.57
SCARB2-220ENST00000640076 Q6ZR54 194 aa5.25□□□□□ -1.57
SCARB2-220ENST00000640076 RMI2Q96E14 147 aa5.25□□□□□ -1.57
SCARB2-220ENST00000640076 IGHV1-58A0A0C4DH39 117 aa5.25□□□□□ -1.57
SCARB2-220ENST00000640076 M0R2N4 97 aa5.25□□□□□ -1.57
SCARB2-220ENST00000640076 ZNF73O43830 326 aaPredicted RBP5.25□□□□□ -1.57
SCARB2-220ENST00000640076 HERVK_113P61574 105 aa5.25□□□□□ -1.57
SCARB2-220ENST00000640076 HYDINQ4G0P3 5121 aa5.25□□□□□ -1.57
SCARB2-220ENST00000640076 IGHV3-64A0A075B6Q5 118 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 IGKV2D-26A0A0A0MRZ7 120 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 TP73-AS1Q9UF72 201 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 DNAH2Q9P225 4427 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 TRBV20-1A0A075B6N2 111 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 K7EP34 96 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 M0R378 163 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 UQCRQO14949 82 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 SCGB1C2P0DMR2 95 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 LGALS3P17931 250 aaKnown RBP5.24□□□□□ -1.57
SCARB2-220ENST00000640076 SPATA45Q537H7 98 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 SMIM29Q86T20 159 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 LINC00526Q96FQ7 95 aa5.24□□□□□ -1.57
SCARB2-220ENST00000640076 TSPEAR-AS2P59090 65 aa5.23□□□□□ -1.57
SCARB2-220ENST00000640076 LCA10Q71F78 164 aa5.23□□□□□ -1.57
SCARB2-220ENST00000640076 Q8N1X5 172 aa5.23□□□□□ -1.57
SCARB2-220ENST00000640076 DHRS4-AS1Q9P1J3 65 aa5.23□□□□□ -1.57
SCARB2-220ENST00000640076 LEPROTO15243 131 aa5.22□□□□□ -1.57
SCARB2-220ENST00000640076 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
SCARB2-220ENST00000640076 Q6ZRN7 208 aaPredicted RBP5.22□□□□□ -1.57
SCARB2-220ENST00000640076 LCE6AA0A183 80 aa5.22□□□□□ -1.57
SCARB2-220ENST00000640076 C15orf56Q8N910 161 aa5.22□□□□□ -1.57
SCARB2-220ENST00000640076 Q8NBF4 154 aa5.22□□□□□ -1.57
SCARB2-220ENST00000640076 KMT2CQ8NEZ4 4911 aaKnown RBP5.21□□□□□ -1.57
SCARB2-220ENST00000640076 PSCAO43653 123 aa5.21□□□□□ -1.58
SCARB2-220ENST00000640076 PCP2Q8IVA1 136 aa5.21□□□□□ -1.58
SCARB2-220ENST00000640076 COX7B2Q8TF08 81 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms