RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 IGKV3-20P01619 116 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 SPINK13Q1W4C9 94 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 Q8N814 137 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 HYDINQ4G0P3 5121 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 KRTAP29-1A8MX34 341 aaPredicted RBP4.26□□□□□ -1.73
RTTN-215ENST00000639487 PRYO14603 147 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 XCL1P47992 114 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 DEFB121Q5J5C9 76 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 XCL2Q9UBD3 114 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 FASNP49327 2511 aaKnown RBP4.26□□□□□ -1.73
RTTN-215ENST00000639487 TWIST1Q15672 202 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 ATXN8Q156A1 80 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 LYZL1Q6UWQ5 148 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 Q6ZVQ6 151 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 MSRB1Q9NZV6 116 aa4.26□□□□□ -1.73
RTTN-215ENST00000639487 IGHV3-21A0A0B4J1V1 117 aa4.25□□□□□ -1.73
RTTN-215ENST00000639487 ZNF815PA8K554 130 aa4.25□□□□□ -1.73
RTTN-215ENST00000639487 SUMO2P61956 95 aaKnown RBP4.25□□□□□ -1.73
RTTN-215ENST00000639487 ESRGQ1W209 222 aa4.25□□□□□ -1.73
RTTN-215ENST00000639487 KRTAP13-1Q8IUC0 172 aa4.25□□□□□ -1.73
RTTN-215ENST00000639487 PRSS2P07478 247 aa4.25□□□□□ -1.73
RTTN-215ENST00000639487 C2orf66Q6UXQ4 117 aa4.25□□□□□ -1.73
RTTN-215ENST00000639487 Q6ZTC4 211 aa4.25□□□□□ -1.73
RTTN-215ENST00000639487 LCA10Q71F78 164 aa4.25□□□□□ -1.73
RTTN-215ENST00000639487 MYO9AB2RTY4 2548 aa4.25□□□□□ -1.73
RTTN-215ENST00000639487 SDHAF1A6NFY7 115 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 H3BQ85 93 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 CFC1BP0CG36 223 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 CFC1P0CG37 223 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 APELAP0DMC3 54 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 SPRR1AP35321 89 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 DEFB104AQ8WTQ1 72 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 RYR1P21817 5038 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 FAM229BQ4G0N7 80 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 Q6ZTI0 123 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 A0A0B4J2C4 111 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 EIF4EBP3O60516 100 aaPredicted RBP4.24□□□□□ -1.73
RTTN-215ENST00000639487 SDIM1Q6ZPB5 146 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 SPACA4Q8TDM5 124 aa4.24□□□□□ -1.73
RTTN-215ENST00000639487 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
RTTN-215ENST00000639487 COX7A2LO14548 114 aa4.23□□□□□ -1.73
RTTN-215ENST00000639487 LINC00313P59037 77 aa4.23□□□□□ -1.73
RTTN-215ENST00000639487 KIAA0087Q14695 138 aa4.23□□□□□ -1.73
RTTN-215ENST00000639487 DEFB135Q30KP9 77 aa4.23□□□□□ -1.73
RTTN-215ENST00000639487 ENHOQ6UWT2 76 aa4.23□□□□□ -1.73
RTTN-215ENST00000639487 C9orf163Q8N9P6 203 aa4.23□□□□□ -1.73
RTTN-215ENST00000639487 TACC2O95359 2948 aa4.23□□□□□ -1.73
RTTN-215ENST00000639487 FUSP35637 526 aaKnown RBP eCLIP4.23□□□□□ -1.73
RTTN-215ENST00000639487 Q1RN00 199 aa4.23□□□□□ -1.73
RTTN-215ENST00000639487 TRAV12-3A0A0B4J271 114 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 SPRR1BP22528 89 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 ASB16-AS1Q495Z4 193 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 LINC00242Q5T6M2 205 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 A0A087WVE0 104 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 LINC00483Q53H64 154 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 LINC00337Q8N6G1 96 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 C14orf178Q8N769 122 aaPredicted RBP4.22□□□□□ -1.73
RTTN-215ENST00000639487 TENM1Q9UKZ4 2725 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 Q6ZSN1 163 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 PHLDA3Q9Y5J5 127 aa4.22□□□□□ -1.73
RTTN-215ENST00000639487 AKAP6Q13023 2319 aa4.21□□□□□ -1.74
RTTN-215ENST00000639487 CENPEQ02224 2701 aa4.21□□□□□ -1.74
RTTN-215ENST00000639487 GHRHP01286 108 aa4.21□□□□□ -1.74
RTTN-215ENST00000639487 ATP5EP56381 51 aaPredicted RBP4.21□□□□□ -1.74
RTTN-215ENST00000639487 PHF5AQ7RTV0 110 aaKnown RBP4.21□□□□□ -1.74
RTTN-215ENST00000639487 WFDC10AQ9H1F0 79 aa4.21□□□□□ -1.74
RTTN-215ENST00000639487 PRO1854Q9UHT4 67 aa4.21□□□□□ -1.74
RTTN-215ENST00000639487 A0A087WTM6 91 aa4.21□□□□□ -1.74
RTTN-215ENST00000639487 C15orf56Q8N910 161 aa4.21□□□□□ -1.74
RTTN-215ENST00000639487 F8WEM9 126 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 GNRH2O43555 120 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 MP68P56378 58 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 UBE2BP63146 152 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 IGFL4Q6B9Z1 124 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 NKAPP1Q8N9T2 125 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 NOP10Q9NPE3 64 aaKnown RBP4.2□□□□□ -1.74
RTTN-215ENST00000639487 ZNF706Q9Y5V0 76 aaPredicted RBP4.2□□□□□ -1.74
RTTN-215ENST00000639487 OPRPNQ99935 248 aaPredicted RBP4.2□□□□□ -1.74
RTTN-215ENST00000639487 RP1L1Q8IWN7 2480 aaPredicted RBP4.2□□□□□ -1.74
RTTN-215ENST00000639487 A0A0J9YY99 117 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 IGHV3-33P01772 117 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 TSPEAR-AS2P59090 65 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 CLEC2BQ92478 149 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 S4R3C0 116 aa4.2□□□□□ -1.74
RTTN-215ENST00000639487 IGKV3D-7A0A0C4DH55 119 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 F8VRH5 84 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 Q8TAT8 98 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 ZNF625Q96I27 306 aaPredicted RBP4.19□□□□□ -1.74
RTTN-215ENST00000639487 HIVEP2P31629 2446 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 IGLV4-69A0A075B6H9 119 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 IGLV4-3A0A075B6K6 122 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 A0A1B0GW54 56 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 RPL37AP8A6NKH3 93 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 IGHV3-30P01768 117 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 IGHV3-30-5P0DP03 117 aa4.19□□□□□ -1.74
RTTN-215ENST00000639487 TRAV13-2A0A0B4J235 113 aa4.18□□□□□ -1.74
RTTN-215ENST00000639487 C16orf90A8MZG2 172 aa4.18□□□□□ -1.74
RTTN-215ENST00000639487 PLNP26678 52 aa4.18□□□□□ -1.74
RTTN-215ENST00000639487 LINC00167Q96N53 147 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms