RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 PATJQ8NI35 1801 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 ZNF236Q9UL36 1845 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 MAPKBP1O60336 1514 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 MAGI3Q5TCQ9 1506 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 ASXL1Q8IXJ9 1541 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 MKI67P46013 3256 aaKnown RBP-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 PIK3C2GO75747 1445 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 ZFYVE9O95405 1425 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 DAPK1P53355 1430 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 C9orf84Q5VXU9 1444 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 UHRF1BP1Q6BDS2 1440 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 EDC4Q6P2E9 1401 aaKnown RBP-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 ANKRD31Q8N7Z5 1873 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 DIP2CQ9Y2E4 1556 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 MAST1Q9Y2H9 1570 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 EP400Q96L91 3159 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 A2MP01023 1474 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 ERCC6Q03468 1493 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 CAMSAP2Q08AD1 1489 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 IFT140Q96RY7 1462 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 PHIPQ8WWQ0 1821 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 ROCK1Q13464 1354 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 CENPFP49454 3210 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 CFAP47Q6ZTR5 3102 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 TRAV21A0A0B4J279 112 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 TRBV7-6A0A0J9YX20 115 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 CRYM-AS1A6NIL9 109 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 SMIM23A6NLE4 172 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 E7EQ34 232 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 F6UZH7 168 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 ATG12O94817 140 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 TNFSF15O95150 251 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 DEXIO95424 95 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 MT-ND4LP03901 98 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 S100A8P05109 93 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 COX6CP09669 75 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 TSPAN19P0C672 248 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 SFTA3P0C7M3 94 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 IGLC2P0DOY2 106 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 IGLC3P0DOY3 106 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 FCER1GP30273 86 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 HIST1H1AQ02539 215 aaPredicted RBP-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 HSD52Q0P140 79 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 CCDC153Q494R4 210 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 TMEM97Q5BJF2 176 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 MINOS1Q5TGZ0 78 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 TMEM244Q5VVB8 128 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 SAMD13Q5VXD3 122 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 PTRHD1Q6GMV3 140 aaKnown RBP-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 KCNRGQ8N5I3 272 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 ACBD7Q8N6N7 88 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 OR13C6PQ8NH95 151 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 THEM6Q8WUY1 208 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 PTH2Q96A98 100 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 PPP1R14BQ96C90 147 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 CCDC42Q96M95 316 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 C9orf16Q9BUW7 83 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 BOLA2Q9H3K6 86 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 GSKIPQ9P0R6 139 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 ABRACLQ9P1F3 81 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 GUCA1BQ9UMX6 200 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 LRRC37A3O60309 1634 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 TRPM1Q7Z4N2 1603 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 NUP210Q8TEM1 1887 aaPredicted RBP-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 UBR2Q8IWV8 1755 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 MYH6P13533 1939 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 MYH13Q9UKX3 1938 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 SYNJ1O43426 1573 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 PLXNC1O60486 1568 aa-0.4□□□□□ -2.47
CCDC7-211ENST00000638889 ERVK-7P63135 1459 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 TCOF1Q13428 1488 aaKnown RBP-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 ZNF518AQ6AHZ1 1483 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 PLB1Q6P1J6 1458 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 MLH3Q9UHC1 1453 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 A0A0G2JMZ2 1700 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 TIAM2Q8IVF5 1701 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 SHROOM2Q13796 1616 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 ANKRD36BQ8N2N9 1353 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 RAPGEF6Q8TEU7 1601 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 MAP3K5Q99683 1374 aa-0.41□□□□□ -2.47
CCDC7-211ENST00000638889 ZFYVE16Q7Z3T8 1539 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 NAP1L6A6NFF2 107 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 IQCF6A8MYZ5 107 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 MIF4GDA9UHW6 222 aaKnown RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 D6R8Y8 96 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 TMEM262E9PQX1 116 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 MRPL33O75394 65 aaKnown RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 RPP14O95059 124 aaKnown RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 DBIP07108 87 aaKnown RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 HMGA1P17096 107 aaKnown RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 RPS27P42677 84 aaKnown RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 GUCA1AP43080 201 aaPredicted RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 POLR2HP52434 150 aaKnown RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 TCTAP57738 103 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 GNG11P61952 73 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 TFAMQ00059 246 aaKnown RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 REEP5Q00765 189 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 C12orf73Q69YU5 71 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 RPS27LQ71UM5 84 aaKnown RBP-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms