RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 PDE6GP18545 87 aa8.42□□□□□ -1.06
GFAP-228ENST00000638488 Q6ZRU5 148 aa8.42□□□□□ -1.06
GFAP-228ENST00000638488 NTM-AS1Q6ZSK4 140 aa8.42□□□□□ -1.06
GFAP-228ENST00000638488 MPLKIPQ8TAP9 179 aa8.42□□□□□ -1.06
GFAP-228ENST00000638488 HECTD1Q9ULT8 2610 aa8.41□□□□□ -1.06
GFAP-228ENST00000638488 C6orf223Q8N319 242 aa8.41□□□□□ -1.06
GFAP-228ENST00000638488 NOTCH3Q9UM47 2321 aa8.41□□□□□ -1.06
GFAP-228ENST00000638488 NREPQ16612 68 aa8.41□□□□□ -1.06
GFAP-228ENST00000638488 INSP01308 110 aa8.4□□□□□ -1.06
GFAP-228ENST00000638488 NANOS2P60321 138 aaKnown RBP8.4□□□□□ -1.06
GFAP-228ENST00000638488 WFDC10AQ9H1F0 79 aa8.4□□□□□ -1.06
GFAP-228ENST00000638488 RNASE1P07998 156 aaKnown RBP8.4□□□□□ -1.07
GFAP-228ENST00000638488 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.07
GFAP-228ENST00000638488 C9orf66Q5T8R8 295 aa8.39□□□□□ -1.07
GFAP-228ENST00000638488 NOTCH2Q04721 2471 aa8.39□□□□□ -1.07
GFAP-228ENST00000638488 UBE2L6O14933 153 aa8.39□□□□□ -1.07
GFAP-228ENST00000638488 HIVEP2P31629 2446 aa8.38□□□□□ -1.07
GFAP-228ENST00000638488 JMJD1CQ15652 2540 aa8.38□□□□□ -1.07
GFAP-228ENST00000638488 A0A087WZ39 114 aa8.37□□□□□ -1.07
GFAP-228ENST00000638488 IGHV3OR16-9A0A0B4J2B5 98 aa8.37□□□□□ -1.07
GFAP-228ENST00000638488 H3BQ85 93 aa8.37□□□□□ -1.07
GFAP-228ENST00000638488 C11orf68Q9H3H3 251 aaKnown RBP8.37□□□□□ -1.07
GFAP-228ENST00000638488 PRYO14603 147 aa8.37□□□□□ -1.07
GFAP-228ENST00000638488 ANK3Q12955 4377 aaKnown RBP8.37□□□□□ -1.07
GFAP-228ENST00000638488 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.07
GFAP-228ENST00000638488 TRGV1A0A0A0MS02 117 aa8.36□□□□□ -1.07
GFAP-228ENST00000638488 BPY2O14599 106 aa8.35□□□□□ -1.07
GFAP-228ENST00000638488 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
GFAP-228ENST00000638488 Q6ZTC4 211 aa8.35□□□□□ -1.07
GFAP-228ENST00000638488 IL17DQ8TAD2 202 aa8.35□□□□□ -1.07
GFAP-228ENST00000638488 SETXQ7Z333 2677 aaKnown RBP8.35□□□□□ -1.07
GFAP-228ENST00000638488 M0R2N4 97 aa8.34□□□□□ -1.07
GFAP-228ENST00000638488 CD164Q04900 197 aa8.33□□□□□ -1.08
GFAP-228ENST00000638488 Q1T7F1 81 aa8.32□□□□□ -1.08
GFAP-228ENST00000638488 NOP10Q9NPE3 64 aaKnown RBP8.32□□□□□ -1.08
GFAP-228ENST00000638488 KRTAP10-3P60369 221 aa8.31□□□□□ -1.08
GFAP-228ENST00000638488 C6orf99Q4VX62 202 aa8.31□□□□□ -1.08
GFAP-228ENST00000638488 INAFM1C9JVW0 142 aa8.31□□□□□ -1.08
GFAP-228ENST00000638488 IGLV1-51P01701 117 aa8.3□□□□□ -1.08
GFAP-228ENST00000638488 MUC7Q8TAX7 377 aa8.3□□□□□ -1.08
GFAP-228ENST00000638488 OCR1Q9BZK8 76 aa8.3□□□□□ -1.08
GFAP-228ENST00000638488 Q8IZM0 81 aa8.3□□□□□ -1.08
GFAP-228ENST00000638488 hDV103S1A0JD37 113 aa8.29□□□□□ -1.08
GFAP-228ENST00000638488 GIG44P09565 113 aaPredicted RBP8.28□□□□□ -1.08
GFAP-228ENST00000638488 COX17Q14061 63 aa8.28□□□□□ -1.08
GFAP-228ENST00000638488 FN1P02751 2386 aaKnown RBP8.28□□□□□ -1.08
GFAP-228ENST00000638488 SPATA3Q8NHX4 192 aa8.28□□□□□ -1.08
GFAP-228ENST00000638488 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
GFAP-228ENST00000638488 PRR3P79522 188 aaKnown RBP8.27□□□□□ -1.09
GFAP-228ENST00000638488 C19orf73Q9NVV2 129 aa8.27□□□□□ -1.09
GFAP-228ENST00000638488 OTOGQ6ZRI0 2925 aa8.27□□□□□ -1.09
GFAP-228ENST00000638488 TRGV2A0A075B6R0 118 aa8.27□□□□□ -1.09
GFAP-228ENST00000638488 DAD1P61803 113 aa8.27□□□□□ -1.09
GFAP-228ENST00000638488 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
GFAP-228ENST00000638488 SCXQ7RTU7 201 aa8.26□□□□□ -1.09
GFAP-228ENST00000638488 CMC4P56277 68 aaPredicted RBP8.25□□□□□ -1.09
GFAP-228ENST00000638488 C2CD3Q4AC94 2353 aa8.25□□□□□ -1.09
GFAP-228ENST00000638488 LINC00959A0A1B0GUT2 108 aa8.24□□□□□ -1.09
GFAP-228ENST00000638488 CD164L2Q6UWJ8 174 aa8.24□□□□□ -1.09
GFAP-228ENST00000638488 Q6ZRP5 223 aa8.24□□□□□ -1.09
GFAP-228ENST00000638488 LOC100131303A0A0U1RQF7 123 aa8.24□□□□□ -1.09
GFAP-228ENST00000638488 IGKV4-1P06312 121 aa8.24□□□□□ -1.09
GFAP-228ENST00000638488 C16orf74Q96GX8 76 aa8.23□□□□□ -1.09
GFAP-228ENST00000638488 Q6ZQY7 126 aa8.23□□□□□ -1.09
GFAP-228ENST00000638488 TRBV6-8A0A0A6YYG3 113 aa8.22□□□□□ -1.09
GFAP-228ENST00000638488 TRGV4A0A0C4DH28 118 aa8.22□□□□□ -1.09
GFAP-228ENST00000638488 CSNK1G2-AS1Q8NCQ2 148 aa8.22□□□□□ -1.09
GFAP-228ENST00000638488 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
GFAP-228ENST00000638488 DEFB130BP0DP73 79 aa8.21□□□□□ -1.09
GFAP-228ENST00000638488 DEFB130AP0DP74 79 aa8.21□□□□□ -1.09
GFAP-228ENST00000638488 VWFP04275 2813 aa8.21□□□□□ -1.1
GFAP-228ENST00000638488 LCE6AA0A183 80 aa8.2□□□□□ -1.1
GFAP-228ENST00000638488 COX7BP24311 80 aa8.2□□□□□ -1.1
GFAP-228ENST00000638488 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.2□□□□□ -1.1
GFAP-228ENST00000638488 IGHV4-28A0A0C4DH34 117 aa8.2□□□□□ -1.1
GFAP-228ENST00000638488 RETNQ9HD89 108 aa8.2□□□□□ -1.1
GFAP-228ENST00000638488 NSD1Q96L73 2696 aaPredicted RBP8.19□□□□□ -1.1
GFAP-228ENST00000638488 IGLV6-57P01721 117 aa8.18□□□□□ -1.1
GFAP-228ENST00000638488 C1orf64Q8NEQ6 169 aa8.18□□□□□ -1.1
GFAP-228ENST00000638488 NBEAL2Q6ZNJ1 2754 aa8.18□□□□□ -1.1
GFAP-228ENST00000638488 TENM1Q9UKZ4 2725 aa8.18□□□□□ -1.1
GFAP-228ENST00000638488 HIVEP1P15822 2718 aa8.17□□□□□ -1.1
GFAP-228ENST00000638488 Q8NDZ9 215 aa8.17□□□□□ -1.1
GFAP-228ENST00000638488 TRAV22A0A0B4J277 110 aa8.17□□□□□ -1.1
GFAP-228ENST00000638488 LYRM9A8MSI8 78 aa8.17□□□□□ -1.1
GFAP-228ENST00000638488 KIAA0087Q14695 138 aa8.17□□□□□ -1.1
GFAP-228ENST00000638488 OXLD1Q5BKU9 147 aa8.17□□□□□ -1.1
GFAP-228ENST00000638488 MRPL55Q7Z7F7 128 aaKnown RBP8.17□□□□□ -1.1
GFAP-228ENST00000638488 DEFB4AO15263 64 aa8.16□□□□□ -1.1
GFAP-228ENST00000638488 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
GFAP-228ENST00000638488 Q8N9L7 120 aa8.15□□□□□ -1.1
GFAP-228ENST00000638488 ATRQ13535 2644 aa8.14□□□□□ -1.11
GFAP-228ENST00000638488 A0A096LPF7 62 aa8.14□□□□□ -1.11
GFAP-228ENST00000638488 A0A1B0GUV1 79 aa8.14□□□□□ -1.11
GFAP-228ENST00000638488 PSPHP1O15172 72 aa8.14□□□□□ -1.11
GFAP-228ENST00000638488 DEFB135Q30KP9 77 aa8.14□□□□□ -1.11
GFAP-228ENST00000638488 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
GFAP-228ENST00000638488 UBE2BP63146 152 aa8.14□□□□□ -1.11
GFAP-228ENST00000638488 DIRC1Q969H9 104 aa8.14□□□□□ -1.11
GFAP-228ENST00000638488 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms