RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ZNF295-AS1Q8N0V1 137 aa13.76□□□□□ -0.21
CACNA1A-257ENST00000638009 MAST4O15021 2626 aa13.75□□□□□ -0.21
CACNA1A-257ENST00000638009 ELOF1P60002 83 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-257ENST00000638009 PRR9Q5T870 116 aa13.75□□□□□ -0.21
CACNA1A-257ENST00000638009 STAB1Q9NY15 2570 aa13.73□□□□□ -0.21
CACNA1A-257ENST00000638009 IGLV8-61A0A075B6I0 122 aa13.73□□□□□ -0.21
CACNA1A-257ENST00000638009 MDFIQ99750 246 aa13.72□□□□□ -0.21
CACNA1A-257ENST00000638009 LINC01554Q52M75 96 aa13.71□□□□□ -0.21
CACNA1A-257ENST00000638009 CDIP1Q9H305 208 aa13.71□□□□□ -0.21
CACNA1A-257ENST00000638009 FAM229AH3BQW9 127 aa13.71□□□□□ -0.22
CACNA1A-257ENST00000638009 LY6G6DO95868 133 aa13.71□□□□□ -0.22
CACNA1A-257ENST00000638009 CFAP46Q8IYW2 2715 aa13.7□□□□□ -0.22
CACNA1A-257ENST00000638009 BRWD1-AS2P59051 145 aa13.7□□□□□ -0.22
CACNA1A-257ENST00000638009 COX8CQ7Z4L0 72 aa13.7□□□□□ -0.22
CACNA1A-257ENST00000638009 DMBT1Q9UGM3 2413 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-257ENST00000638009 LINC01006Q8NI28 216 aa13.7□□□□□ -0.22
CACNA1A-257ENST00000638009 SPATA3Q8NHX4 192 aa13.7□□□□□ -0.22
CACNA1A-257ENST00000638009 KTN1-AS1Q86SY8 53 aa13.7□□□□□ -0.22
CACNA1A-257ENST00000638009 SPACA4Q8TDM5 124 aa13.69□□□□□ -0.22
CACNA1A-257ENST00000638009 IGLV4-60A0A075B6I1 120 aa13.68□□□□□ -0.22
CACNA1A-257ENST00000638009 KIAA0087Q14695 138 aa13.68□□□□□ -0.22
CACNA1A-257ENST00000638009 FHL2Q14192 279 aa13.68□□□□□ -0.22
CACNA1A-257ENST00000638009 ATRQ13535 2644 aa13.67□□□□□ -0.22
CACNA1A-257ENST00000638009 TSPEAR-AS2P59090 65 aa13.67□□□□□ -0.22
CACNA1A-257ENST00000638009 SMCR5Q8TEV8 140 aa13.66□□□□□ -0.22
CACNA1A-257ENST00000638009 C11orf21Q9P2W6 132 aa13.66□□□□□ -0.22
CACNA1A-257ENST00000638009 EPM2AB3EWF7 344 aa13.65□□□□□ -0.22
CACNA1A-257ENST00000638009 MIR22HGQ0VDD5 57 aa13.65□□□□□ -0.22
CACNA1A-257ENST00000638009 Q8NBF4 154 aa13.65□□□□□ -0.22
CACNA1A-257ENST00000638009 MGAM2Q2M2H8 2515 aa13.64□□□□□ -0.23
CACNA1A-257ENST00000638009 NBEAL1Q6ZS30 2694 aa13.64□□□□□ -0.23
CACNA1A-257ENST00000638009 ZNF580Q9UK33 172 aa13.64□□□□□ -0.23
CACNA1A-257ENST00000638009 IGLV1-51P01701 117 aa13.63□□□□□ -0.23
CACNA1A-257ENST00000638009 BRI3O95415 125 aa13.63□□□□□ -0.23
CACNA1A-257ENST00000638009 Q8NA96 180 aa13.63□□□□□ -0.23
CACNA1A-257ENST00000638009 C22orf24Q9Y442 160 aa13.63□□□□□ -0.23
CACNA1A-257ENST00000638009 A8MTW9 85 aa13.61□□□□□ -0.23
CACNA1A-257ENST00000638009 COL4A3Q01955 1670 aa13.6□□□□□ -0.23
CACNA1A-257ENST00000638009 Q6ZQT0 140 aa13.59□□□□□ -0.23
CACNA1A-257ENST00000638009 TRBV7-4A0A0J9YYF1 115 aa13.59□□□□□ -0.23
CACNA1A-257ENST00000638009 KIF25-AS1Q9Y6Z4 181 aa13.59□□□□□ -0.23
CACNA1A-257ENST00000638009 GAS8-AS1O95177 125 aa13.59□□□□□ -0.23
CACNA1A-257ENST00000638009 LYPD5Q6UWN5 251 aa13.59□□□□□ -0.23
CACNA1A-257ENST00000638009 LCA10Q71F78 164 aa13.58□□□□□ -0.23
CACNA1A-257ENST00000638009 CENPEQ02224 2701 aa13.58□□□□□ -0.24
CACNA1A-257ENST00000638009 CDC42SE1Q9NRR8 79 aa13.57□□□□□ -0.24
CACNA1A-257ENST00000638009 COA5Q86WW8 74 aa13.57□□□□□ -0.24
CACNA1A-257ENST00000638009 A8MWP4 228 aa13.57□□□□□ -0.24
CACNA1A-257ENST00000638009 LINC01546A6NGU7 62 aa13.56□□□□□ -0.24
CACNA1A-257ENST00000638009 IGLV5-39A0A0G2JS06 123 aa13.55□□□□□ -0.24
CACNA1A-257ENST00000638009 Q6ZRX8 168 aa13.55□□□□□ -0.24
CACNA1A-257ENST00000638009 Q6ZRU5 148 aa13.55□□□□□ -0.24
CACNA1A-257ENST00000638009 TYMSOSQ8TAI1 123 aa13.55□□□□□ -0.24
CACNA1A-257ENST00000638009 APLNQ9ULZ1 77 aa13.54□□□□□ -0.24
CACNA1A-257ENST00000638009 ODF3L2Q3SX64 289 aa13.54□□□□□ -0.24
CACNA1A-257ENST00000638009 LINC00476Q8WZB0 136 aa13.52□□□□□ -0.25
CACNA1A-257ENST00000638009 TM2D3Q9BRN9 247 aa13.51□□□□□ -0.25
CACNA1A-257ENST00000638009 C10orf99Q6UWK7 81 aa13.51□□□□□ -0.25
CACNA1A-257ENST00000638009 Q6ZPA2 131 aa13.51□□□□□ -0.25
CACNA1A-257ENST00000638009 CENPFP49454 3210 aa13.51□□□□□ -0.25
CACNA1A-257ENST00000638009 Q6ZRP5 223 aa13.51□□□□□ -0.25
CACNA1A-257ENST00000638009 PRR15Q8IV56 129 aa13.5□□□□□ -0.25
CACNA1A-257ENST00000638009 C1orf229Q6ZS94 237 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-257ENST00000638009 LINC00310P59036 64 aa13.47□□□□□ -0.25
CACNA1A-257ENST00000638009 C18orf65Q6ZTR6 163 aa13.47□□□□□ -0.25
CACNA1A-257ENST00000638009 Q96NJ1 140 aa13.46□□□□□ -0.25
CACNA1A-257ENST00000638009 H3BNG1 76 aa13.45□□□□□ -0.26
CACNA1A-257ENST00000638009 LINC00483Q53H64 154 aa13.45□□□□□ -0.26
CACNA1A-257ENST00000638009 C9orf129Q5T035 196 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-257ENST00000638009 C16orf90A8MZG2 172 aa13.44□□□□□ -0.26
CACNA1A-257ENST00000638009 IGHV3OR16-9A0A0B4J2B5 98 aa13.44□□□□□ -0.26
CACNA1A-257ENST00000638009 LINC00167Q96N53 147 aa13.44□□□□□ -0.26
CACNA1A-257ENST00000638009 CSNK1G2-AS1Q8NCQ2 148 aa13.43□□□□□ -0.26
CACNA1A-257ENST00000638009 C16orf95Q9H693 158 aa13.43□□□□□ -0.26
CACNA1A-257ENST00000638009 KLKP1Q107X0 134 aa13.43□□□□□ -0.26
CACNA1A-257ENST00000638009 URB1-AS1Q96HZ7 61 aa13.43□□□□□ -0.26
CACNA1A-257ENST00000638009 IGLV5-45A0A087WSX0 123 aa13.42□□□□□ -0.26
CACNA1A-257ENST00000638009 MRPL34Q9BQ48 92 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-257ENST00000638009 PRO3102Q9H379 93 aa13.4□□□□□ -0.26
CACNA1A-257ENST00000638009 C19orf84I3L1E1 186 aa13.37□□□□□ -0.27
CACNA1A-257ENST00000638009 COX6B2Q6YFQ2 88 aa13.37□□□□□ -0.27
CACNA1A-257ENST00000638009 A8MUN3 132 aa13.36□□□□□ -0.27
CACNA1A-257ENST00000638009 FAM19A4Q96LR4 140 aa13.35□□□□□ -0.27
CACNA1A-257ENST00000638009 CRIP3Q6Q6R5 217 aa13.35□□□□□ -0.27
CACNA1A-257ENST00000638009 A0A096LNJ9 63 aa13.35□□□□□ -0.27
CACNA1A-257ENST00000638009 FHL3Q13643 280 aa13.35□□□□□ -0.27
CACNA1A-257ENST00000638009 BAHCC1Q9P281 2608 aa13.34□□□□□ -0.27
CACNA1A-257ENST00000638009 SPANXA2-OT1Q8N9U9 137 aa13.34□□□□□ -0.27
CACNA1A-257ENST00000638009 A0A0A0MQY5 61 aa13.32□□□□□ -0.28
CACNA1A-257ENST00000638009 RBM12B-AS1Q9P1G2 102 aa13.31□□□□□ -0.28
CACNA1A-257ENST00000638009 ST20-AS1Q8NBB2 130 aa13.3□□□□□ -0.28
CACNA1A-257ENST00000638009 Q6ZSN1 163 aa13.29□□□□□ -0.28
CACNA1A-257ENST00000638009 PLA2G5P39877 138 aa13.28□□□□□ -0.28
CACNA1A-257ENST00000638009 GVQW2A0A096LPI5 108 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-257ENST00000638009 PRO0461Q9UI25 63 aa13.27□□□□□ -0.28
CACNA1A-257ENST00000638009 Q1T7F1 81 aa13.27□□□□□ -0.28
CACNA1A-257ENST00000638009 IGLV6-57P01721 117 aa13.27□□□□□ -0.28
CACNA1A-257ENST00000638009 RPL37AP61513 92 aaKnown RBP13.27□□□□□ -0.28
CACNA1A-257ENST00000638009 C8orf17Q9NRJ1 99 aa13.26□□□□□ -0.29
CACNA1A-257ENST00000638009 A0A1W2PNU3 283 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms