RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 K7ERU9 68 aa13.68□□□□□ -0.22
CLN8-213ENST00000637156 C14orf177Q52M58 125 aa13.68□□□□□ -0.22
CLN8-213ENST00000637156 COPS9Q8WXC6 57 aa13.68□□□□□ -0.22
CLN8-213ENST00000637156 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.67□□□□□ -0.22
CLN8-213ENST00000637156 NDUFC2-KCTD14E9PQ53 114 aa13.67□□□□□ -0.22
CLN8-213ENST00000637156 CNBPP62633 177 aaKnown RBP13.67□□□□□ -0.22
CLN8-213ENST00000637156 Q6ZRP5 223 aa13.67□□□□□ -0.22
CLN8-213ENST00000637156 CBY1Q9Y3M2 126 aa13.67□□□□□ -0.22
CLN8-213ENST00000637156 A0A087WTM6 91 aa13.66□□□□□ -0.22
CLN8-213ENST00000637156 LYRM7Q5U5X0 104 aa13.66□□□□□ -0.22
CLN8-213ENST00000637156 PGPEP1Q9NXJ5 209 aa13.66□□□□□ -0.22
CLN8-213ENST00000637156 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.65□□□□□ -0.22
CLN8-213ENST00000637156 F8W1H4 67 aa13.65□□□□□ -0.22
CLN8-213ENST00000637156 XAGE1AQ9HD64 81 aa13.65□□□□□ -0.22
CLN8-213ENST00000637156 TLX1NBP0CAT3 122 aa13.63□□□□□ -0.23
CLN8-213ENST00000637156 Q8N814 137 aa13.63□□□□□ -0.23
CLN8-213ENST00000637156 GAGE2EQ4V326 116 aa13.63□□□□□ -0.23
CLN8-213ENST00000637156 GAGE2DQ9UEU5 116 aa13.63□□□□□ -0.23
CLN8-213ENST00000637156 Q8NDZ9 215 aa13.62□□□□□ -0.23
CLN8-213ENST00000637156 A0A0B4J2C4 111 aa13.61□□□□□ -0.23
CLN8-213ENST00000637156 PRO1854Q9UHT4 67 aa13.61□□□□□ -0.23
CLN8-213ENST00000637156 IGKV2-28A0A075B6P5 120 aa13.61□□□□□ -0.23
CLN8-213ENST00000637156 LCE6AA0A183 80 aa13.61□□□□□ -0.23
CLN8-213ENST00000637156 TSPAN13O95857 204 aa13.61□□□□□ -0.23
CLN8-213ENST00000637156 IGKV2D-28P01615 120 aa13.61□□□□□ -0.23
CLN8-213ENST00000637156 PRR3P79522 188 aaKnown RBP13.61□□□□□ -0.23
CLN8-213ENST00000637156 RTL8CO15255 209 aa13.6□□□□□ -0.23
CLN8-213ENST00000637156 FRAS1Q86XX4 4008 aa13.6□□□□□ -0.23
CLN8-213ENST00000637156 KMT2CQ8NEZ4 4911 aaKnown RBP13.59□□□□□ -0.23
CLN8-213ENST00000637156 RPL18AQ02543 176 aaKnown RBP13.58□□□□□ -0.24
CLN8-213ENST00000637156 TNP2Q05952 138 aa13.58□□□□□ -0.24
CLN8-213ENST00000637156 C9orf129Q5T035 196 aaKnown RBP13.58□□□□□ -0.24
CLN8-213ENST00000637156 TRBV20-1A0A075B6N2 111 aa13.57□□□□□ -0.24
CLN8-213ENST00000637156 NDUFC2O95298 119 aa13.57□□□□□ -0.24
CLN8-213ENST00000637156 C9orf163Q8N9P6 203 aa13.57□□□□□ -0.24
CLN8-213ENST00000637156 H3BMG7 143 aa13.56□□□□□ -0.24
CLN8-213ENST00000637156 LINC00337Q8N6G1 96 aa13.56□□□□□ -0.24
CLN8-213ENST00000637156 HECTD4Q9Y4D8 3996 aa13.56□□□□□ -0.24
CLN8-213ENST00000637156 LOC107984640A0A0U1RRK4 108 aa13.55□□□□□ -0.24
CLN8-213ENST00000637156 GAGE2BQ13066 116 aa13.55□□□□□ -0.24
CLN8-213ENST00000637156 LINC01620Q4KN68 170 aa13.55□□□□□ -0.24
CLN8-213ENST00000637156 FAT2Q9NYQ8 4349 aa13.55□□□□□ -0.24
CLN8-213ENST00000637156 FUSP35637 526 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLN8-213ENST00000637156 H7C2G1 150 aa13.53□□□□□ -0.24
CLN8-213ENST00000637156 PRO0461Q9UI25 63 aa13.53□□□□□ -0.24
CLN8-213ENST00000637156 DNAH11Q96DT5 4516 aa13.52□□□□□ -0.24
CLN8-213ENST00000637156 TRAV13-2A0A0B4J235 113 aa13.5□□□□□ -0.25
CLN8-213ENST00000637156 RPL13AP40429 203 aaKnown RBP13.5□□□□□ -0.25
CLN8-213ENST00000637156 SDIM1Q6ZPB5 146 aa13.5□□□□□ -0.25
CLN8-213ENST00000637156 VPREB1P12018 145 aa13.5□□□□□ -0.25
CLN8-213ENST00000637156 A0A096LNI7 61 aa13.49□□□□□ -0.25
CLN8-213ENST00000637156 C16orf90A8MZG2 172 aa13.49□□□□□ -0.25
CLN8-213ENST00000637156 NCR3O14931 201 aa13.49□□□□□ -0.25
CLN8-213ENST00000637156 VPS25Q9BRG1 176 aa13.48□□□□□ -0.25
CLN8-213ENST00000637156 RYR2Q92736 4967 aa13.48□□□□□ -0.25
CLN8-213ENST00000637156 FAM168BA1KXE4 195 aa13.48□□□□□ -0.25
CLN8-213ENST00000637156 J3QR89 54 aa13.48□□□□□ -0.25
CLN8-213ENST00000637156 SERTAD4-AS1Q5TG53 156 aa13.47□□□□□ -0.25
CLN8-213ENST00000637156 KRTAP7-1Q8IUC3 87 aa13.47□□□□□ -0.25
CLN8-213ENST00000637156 OR13C6PQ8NH95 151 aa13.47□□□□□ -0.25
CLN8-213ENST00000637156 IGKV2-24A0A0C4DH68 120 aa13.46□□□□□ -0.25
CLN8-213ENST00000637156 PSMB2P49721 201 aa13.46□□□□□ -0.25
CLN8-213ENST00000637156 PLA2G2DQ9UNK4 145 aa13.46□□□□□ -0.26
CLN8-213ENST00000637156 SCGB1C2P0DMR2 95 aa13.45□□□□□ -0.26
CLN8-213ENST00000637156 Q1RN00 199 aa13.45□□□□□ -0.26
CLN8-213ENST00000637156 TRBV10-2A0A0K0K1G8 114 aa13.44□□□□□ -0.26
CLN8-213ENST00000637156 TCL1BO95988 128 aa13.44□□□□□ -0.26
CLN8-213ENST00000637156 CHTF8P0CG12 524 aa13.44□□□□□ -0.26
CLN8-213ENST00000637156 KRTAP10-2P60368 255 aa13.43□□□□□ -0.26
CLN8-213ENST00000637156 TMEM126AQ9H061 195 aa13.43□□□□□ -0.26
CLN8-213ENST00000637156 PKD1P98161 4303 aa13.43□□□□□ -0.26
CLN8-213ENST00000637156 DNAH5Q8TE73 4624 aa13.42□□□□□ -0.26
CLN8-213ENST00000637156 IGLV5-52A0A0A0MRZ9 124 aa13.42□□□□□ -0.26
CLN8-213ENST00000637156 M0QXV9 152 aa13.42□□□□□ -0.26
CLN8-213ENST00000637156 TRIAP1O43715 76 aa13.41□□□□□ -0.26
CLN8-213ENST00000637156 IGLV6-57P01721 117 aa13.41□□□□□ -0.26
CLN8-213ENST00000637156 ETDBQ3ZM63 59 aa13.41□□□□□ -0.26
CLN8-213ENST00000637156 S100A7L2Q5SY68 101 aa13.41□□□□□ -0.26
CLN8-213ENST00000637156 SMIM11BQ8TCY0 68 aa13.41□□□□□ -0.26
CLN8-213ENST00000637156 A0A1W2PNN7 141 aa13.4□□□□□ -0.26
CLN8-213ENST00000637156 PANO1I0J062 215 aa13.4□□□□□ -0.26
CLN8-213ENST00000637156 M0R378 163 aa13.4□□□□□ -0.26
CLN8-213ENST00000637156 RPL28P46779 137 aaKnown RBP13.39□□□□□ -0.27
CLN8-213ENST00000637156 IGLV5-37A0A075B6J1 123 aa13.38□□□□□ -0.27
CLN8-213ENST00000637156 TRBV10-3A0A0K0K1G6 114 aa13.38□□□□□ -0.27
CLN8-213ENST00000637156 COX6CP09669 75 aa13.38□□□□□ -0.27
CLN8-213ENST00000637156 C22orf24Q9Y442 160 aa13.38□□□□□ -0.27
CLN8-213ENST00000637156 SMCPP49901 116 aaPredicted RBP13.38□□□□□ -0.27
CLN8-213ENST00000637156 FAM19A5Q7Z5A7 132 aaPredicted RBP13.38□□□□□ -0.27
CLN8-213ENST00000637156 NKAPP1Q8N9T2 125 aa13.38□□□□□ -0.27
CLN8-213ENST00000637156 PKIGQ9Y2B9 76 aa13.38□□□□□ -0.27
CLN8-213ENST00000637156 ATXN8Q156A1 80 aa13.37□□□□□ -0.27
CLN8-213ENST00000637156 LINC01600Q96MT4 127 aa13.37□□□□□ -0.27
CLN8-213ENST00000637156 C7orf33Q8WU49 177 aa13.36□□□□□ -0.27
CLN8-213ENST00000637156 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.36□□□□□ -0.27
CLN8-213ENST00000637156 LINC00474Q9P2X8 69 aa13.36□□□□□ -0.27
CLN8-213ENST00000637156 TEN1Q86WV5 123 aa13.35□□□□□ -0.27
CLN8-213ENST00000637156 MTURNQ8N3F0 131 aa13.34□□□□□ -0.27
CLN8-213ENST00000637156 LINC00167Q96N53 147 aa13.33□□□□□ -0.27
CLN8-213ENST00000637156 MRPL55Q7Z7F7 128 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms