RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 ABCA12Q86UK0 2595 aa6.15□□□□□ -1.43
CHRNA7-219ENST00000636709 LINC00588Q9Y4M8 146 aa6.15□□□□□ -1.43
CHRNA7-219ENST00000636709 TRAV7A0A075B6U4 112 aa6.15□□□□□ -1.43
CHRNA7-219ENST00000636709 COX7CP15954 63 aa6.14□□□□□ -1.43
CHRNA7-219ENST00000636709 A0A1B0GU69 56 aa6.14□□□□□ -1.43
CHRNA7-219ENST00000636709 EPM2AB3EWF7 344 aa6.14□□□□□ -1.43
CHRNA7-219ENST00000636709 SMIM29Q86T20 159 aa6.13□□□□□ -1.43
CHRNA7-219ENST00000636709 ZNF462Q96JM2 2506 aa6.13□□□□□ -1.43
CHRNA7-219ENST00000636709 ACYP2P14621 99 aa6.13□□□□□ -1.43
CHRNA7-219ENST00000636709 IMUPQ9GZP8 106 aa6.13□□□□□ -1.43
CHRNA7-219ENST00000636709 KIF25-AS1Q9Y6Z4 181 aa6.13□□□□□ -1.43
CHRNA7-219ENST00000636709 PIEZO1Q92508 2521 aa6.13□□□□□ -1.43
CHRNA7-219ENST00000636709 C6orf48Q9UBA6 75 aa6.13□□□□□ -1.43
CHRNA7-219ENST00000636709 DNAH10OSP0CZ25 163 aa6.11□□□□□ -1.43
CHRNA7-219ENST00000636709 AMELXQ99217 191 aa6.11□□□□□ -1.43
CHRNA7-219ENST00000636709 FAM168BA1KXE4 195 aa6.11□□□□□ -1.43
CHRNA7-219ENST00000636709 TLN2Q9Y4G6 2542 aa6.11□□□□□ -1.43
CHRNA7-219ENST00000636709 C1orf195Q5TG92 126 aa6.1□□□□□ -1.43
CHRNA7-219ENST00000636709 CNFNQ9BYD5 112 aa6.1□□□□□ -1.43
CHRNA7-219ENST00000636709 ST20-AS1Q8NBB2 130 aa6.1□□□□□ -1.43
CHRNA7-219ENST00000636709 Q8NBF4 154 aa6.1□□□□□ -1.43
CHRNA7-219ENST00000636709 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
CHRNA7-219ENST00000636709 TMEM254Q8TBM7 123 aa6.09□□□□□ -1.43
CHRNA7-219ENST00000636709 COL4A2P08572 1712 aa6.09□□□□□ -1.44
CHRNA7-219ENST00000636709 C11orf72Q8NBR9 251 aa6.08□□□□□ -1.44
CHRNA7-219ENST00000636709 APLNQ9ULZ1 77 aa6.08□□□□□ -1.44
CHRNA7-219ENST00000636709 CENPFP49454 3210 aa6.07□□□□□ -1.44
CHRNA7-219ENST00000636709 LINC00476Q8WZB0 136 aa6.07□□□□□ -1.44
CHRNA7-219ENST00000636709 ANKRD17O75179 2603 aaKnown RBP6.07□□□□□ -1.44
CHRNA7-219ENST00000636709 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
CHRNA7-219ENST00000636709 KRTAP10-11P60412 298 aa6.07□□□□□ -1.44
CHRNA7-219ENST00000636709 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
CHRNA7-219ENST00000636709 SMIM26A0A096LP01 95 aa6.05□□□□□ -1.44
CHRNA7-219ENST00000636709 K7EIL1 84 aa6.05□□□□□ -1.44
CHRNA7-219ENST00000636709 BCE1O60756 84 aa6.05□□□□□ -1.44
CHRNA7-219ENST00000636709 SPATA3Q8NHX4 192 aa6.05□□□□□ -1.44
CHRNA7-219ENST00000636709 OBSCN-AS1Q96MR7 158 aa6.05□□□□□ -1.44
CHRNA7-219ENST00000636709 LINC00846Q9NV44 126 aa6.05□□□□□ -1.44
CHRNA7-219ENST00000636709 LINC00304Q8N9R0 145 aa6.04□□□□□ -1.44
CHRNA7-219ENST00000636709 LINC01561Q8N1V8 128 aa6.04□□□□□ -1.44
CHRNA7-219ENST00000636709 Q8NAQ8 132 aa6.04□□□□□ -1.44
CHRNA7-219ENST00000636709 TM2D3Q9BRN9 247 aa6.04□□□□□ -1.44
CHRNA7-219ENST00000636709 F8P00451 2351 aa6.04□□□□□ -1.44
CHRNA7-219ENST00000636709 M0R2T5 61 aa6.03□□□□□ -1.44
CHRNA7-219ENST00000636709 IGLV6-57P01721 117 aa6.03□□□□□ -1.44
CHRNA7-219ENST00000636709 DSCR10P59022 87 aa6.03□□□□□ -1.44
CHRNA7-219ENST00000636709 PCSK5Q92824 1860 aa6.03□□□□□ -1.44
CHRNA7-219ENST00000636709 URB1-AS1Q96HZ7 61 aa6.02□□□□□ -1.45
CHRNA7-219ENST00000636709 SETD2Q9BYW2 2564 aaPredicted RBP6.02□□□□□ -1.45
CHRNA7-219ENST00000636709 TP53AIP1Q9HCN2 124 aa6.02□□□□□ -1.45
CHRNA7-219ENST00000636709 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
CHRNA7-219ENST00000636709 Q6ZRX8 168 aa6.01□□□□□ -1.45
CHRNA7-219ENST00000636709 IGLV5-37A0A075B6J1 123 aa6.01□□□□□ -1.45
CHRNA7-219ENST00000636709 SSBP3-AS1Q7Z2R9 100 aa6□□□□□ -1.45
CHRNA7-219ENST00000636709 H3BNG1 76 aa6□□□□□ -1.45
CHRNA7-219ENST00000636709 IGHV3OR16-9A0A0B4J2B5 98 aa5.99□□□□□ -1.45
CHRNA7-219ENST00000636709 FAM19A4Q96LR4 140 aa5.99□□□□□ -1.45
CHRNA7-219ENST00000636709 SPTBN4Q9H254 2564 aa5.99□□□□□ -1.45
CHRNA7-219ENST00000636709 ACANP16112 2415 aa5.99□□□□□ -1.45
CHRNA7-219ENST00000636709 ELOF1P60002 83 aaKnown RBP5.99□□□□□ -1.45
CHRNA7-219ENST00000636709 TRAV22A0A0B4J277 110 aa5.98□□□□□ -1.45
CHRNA7-219ENST00000636709 YPEL4Q96NS1 127 aa5.98□□□□□ -1.45
CHRNA7-219ENST00000636709 ANKRD11Q6UB99 2663 aaPredicted RBP5.98□□□□□ -1.45
CHRNA7-219ENST00000636709 CXCL6P80162 114 aa5.98□□□□□ -1.45
CHRNA7-219ENST00000636709 RBM12B-AS1Q9P1G2 102 aa5.98□□□□□ -1.45
CHRNA7-219ENST00000636709 USP9XQ93008 2570 aaPredicted RBP5.97□□□□□ -1.45
CHRNA7-219ENST00000636709 K7EQZ3 153 aa5.96□□□□□ -1.45
CHRNA7-219ENST00000636709 POLQO75417 2590 aa5.96□□□□□ -1.46
CHRNA7-219ENST00000636709 GVQW2A0A096LPI5 108 aaPredicted RBP5.96□□□□□ -1.46
CHRNA7-219ENST00000636709 LINC00528Q8N1L1 170 aa5.95□□□□□ -1.46
CHRNA7-219ENST00000636709 A0A0D9SG42 100 aa5.94□□□□□ -1.46
CHRNA7-219ENST00000636709 FAM218AQ96MZ4 157 aa5.94□□□□□ -1.46
CHRNA7-219ENST00000636709 A0A087WTM6 91 aa5.94□□□□□ -1.46
CHRNA7-219ENST00000636709 A0A096LNJ9 63 aa5.94□□□□□ -1.46
CHRNA7-219ENST00000636709 A0A0G2JQZ4 141 aa5.93□□□□□ -1.46
CHRNA7-219ENST00000636709 A0A1W2PNN7 141 aa5.93□□□□□ -1.46
CHRNA7-219ENST00000636709 UTRNP46939 3433 aa5.93□□□□□ -1.46
CHRNA7-219ENST00000636709 IGLV5-39A0A0G2JS06 123 aa5.93□□□□□ -1.46
CHRNA7-219ENST00000636709 LINC00310P59036 64 aa5.93□□□□□ -1.46
CHRNA7-219ENST00000636709 C15orf56Q8N910 161 aa5.93□□□□□ -1.46
CHRNA7-219ENST00000636709 CHD8Q9HCK8 2581 aa5.92□□□□□ -1.46
CHRNA7-219ENST00000636709 KRTAP10-3P60369 221 aa5.92□□□□□ -1.46
CHRNA7-219ENST00000636709 FASNP49327 2511 aaKnown RBP5.92□□□□□ -1.46
CHRNA7-219ENST00000636709 LINC01600Q96MT4 127 aa5.91□□□□□ -1.46
CHRNA7-219ENST00000636709 LINC00336Q6ZUF6 198 aa5.91□□□□□ -1.46
CHRNA7-219ENST00000636709 MTORP42345 2549 aa5.91□□□□□ -1.46
CHRNA7-219ENST00000636709 COX8CQ7Z4L0 72 aa5.91□□□□□ -1.46
CHRNA7-219ENST00000636709 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.46
CHRNA7-219ENST00000636709 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.46
CHRNA7-219ENST00000636709 ZNF575Q86XF7 245 aa5.9□□□□□ -1.46
CHRNA7-219ENST00000636709 ZNF861PO60384 105 aa5.9□□□□□ -1.47
CHRNA7-219ENST00000636709 PKD1L2Q7Z442 2459 aa5.89□□□□□ -1.47
CHRNA7-219ENST00000636709 C8orf87E5RJ46 101 aa5.89□□□□□ -1.47
CHRNA7-219ENST00000636709 Q6ZQT0 140 aa5.89□□□□□ -1.47
CHRNA7-219ENST00000636709 CSNK1G2-AS1Q8NCQ2 148 aa5.89□□□□□ -1.47
CHRNA7-219ENST00000636709 A8MWP4 228 aa5.89□□□□□ -1.47
CHRNA7-219ENST00000636709 TRBV7-4A0A0J9YYF1 115 aa5.88□□□□□ -1.47
CHRNA7-219ENST00000636709 IGLV1-50A0A075B6I6 118 aa5.88□□□□□ -1.47
CHRNA7-219ENST00000636709 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
CHRNA7-219ENST00000636709 Q6ZSA8 131 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms