RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TRAV10A0A0B4J240 114 aa10.02□□□□□ -0.81
CACNA1A-220ENST00000635988 CYSRT1A8MQ03 144 aa10.02□□□□□ -0.81
CACNA1A-220ENST00000635988 SPATA3Q8NHX4 192 aa10.01□□□□□ -0.81
CACNA1A-220ENST00000635988 TRBV7-4A0A0J9YYF1 115 aa10.01□□□□□ -0.81
CACNA1A-220ENST00000635988 NAV2Q8IVL1 2488 aa10□□□□□ -0.81
CACNA1A-220ENST00000635988 JMJD1CQ15652 2540 aa10□□□□□ -0.81
CACNA1A-220ENST00000635988 TRBV7-6A0A0J9YX20 115 aa10□□□□□ -0.81
CACNA1A-220ENST00000635988 Q8N3U1 123 aa10□□□□□ -0.81
CACNA1A-220ENST00000635988 SETXQ7Z333 2677 aaKnown RBP9.99□□□□□ -0.81
CACNA1A-220ENST00000635988 COX7BP24311 80 aa9.98□□□□□ -0.81
CACNA1A-220ENST00000635988 ATP5EP56381 51 aaPredicted RBP9.98□□□□□ -0.81
CACNA1A-220ENST00000635988 EPG5Q9HCE0 2579 aa9.97□□□□□ -0.81
CACNA1A-220ENST00000635988 ZNF73O43830 326 aaPredicted RBP9.97□□□□□ -0.81
CACNA1A-220ENST00000635988 LELP1Q5T871 98 aa9.97□□□□□ -0.81
CACNA1A-220ENST00000635988 RMI2Q96E14 147 aa9.97□□□□□ -0.81
CACNA1A-220ENST00000635988 SNURFQ9Y675 71 aa9.97□□□□□ -0.81
CACNA1A-220ENST00000635988 MYO18BQ8IUG5 2567 aa9.97□□□□□ -0.81
CACNA1A-220ENST00000635988 PTPN13Q12923 2485 aa9.97□□□□□ -0.81
CACNA1A-220ENST00000635988 SMIM26A0A096LP01 95 aa9.96□□□□□ -0.81
CACNA1A-220ENST00000635988 F8WEM9 126 aa9.96□□□□□ -0.81
CACNA1A-220ENST00000635988 DAD1P61803 113 aa9.96□□□□□ -0.81
CACNA1A-220ENST00000635988 WFDC11Q8NEX6 87 aa9.96□□□□□ -0.81
CACNA1A-220ENST00000635988 PRR34Q9NV39 138 aa9.96□□□□□ -0.81
CACNA1A-220ENST00000635988 ELOF1P60002 83 aaKnown RBP9.96□□□□□ -0.82
CACNA1A-220ENST00000635988 FAM208BQ5VWN6 2430 aa9.95□□□□□ -0.82
CACNA1A-220ENST00000635988 AKAP9Q99996 3911 aa9.95□□□□□ -0.82
CACNA1A-220ENST00000635988 SEC61GP60059 68 aa9.95□□□□□ -0.82
CACNA1A-220ENST00000635988 LINC00336Q6ZUF6 198 aa9.95□□□□□ -0.82
CACNA1A-220ENST00000635988 ERC2-IT1O76042 136 aa9.93□□□□□ -0.82
CACNA1A-220ENST00000635988 C6orf48Q9UBA6 75 aa9.93□□□□□ -0.82
CACNA1A-220ENST00000635988 LRRK2Q5S007 2527 aa9.93□□□□□ -0.82
CACNA1A-220ENST00000635988 IGSF10Q6WRI0 2623 aa9.93□□□□□ -0.82
CACNA1A-220ENST00000635988 PRB1P04280 392 aa9.93□□□□□ -0.82
CACNA1A-220ENST00000635988 TM2D3Q9BRN9 247 aa9.93□□□□□ -0.82
CACNA1A-220ENST00000635988 MIFP14174 115 aa9.92□□□□□ -0.82
CACNA1A-220ENST00000635988 NREPQ16612 68 aa9.92□□□□□ -0.82
CACNA1A-220ENST00000635988 KLK12Q9UKR0 248 aa9.92□□□□□ -0.82
CACNA1A-220ENST00000635988 XAGE1AQ9HD64 81 aa9.92□□□□□ -0.82
CACNA1A-220ENST00000635988 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
CACNA1A-220ENST00000635988 BPY2O14599 106 aa9.9□□□□□ -0.82
CACNA1A-220ENST00000635988 APOC4P55056 127 aa9.9□□□□□ -0.82
CACNA1A-220ENST00000635988 C1orf43Q9BWL3 253 aa9.9□□□□□ -0.82
CACNA1A-220ENST00000635988 DEFB135Q30KP9 77 aa9.9□□□□□ -0.83
CACNA1A-220ENST00000635988 SONP18583 2426 aaKnown RBP9.89□□□□□ -0.83
CACNA1A-220ENST00000635988 M0R378 163 aa9.89□□□□□ -0.83
CACNA1A-220ENST00000635988 DEFB4AO15263 64 aa9.89□□□□□ -0.83
CACNA1A-220ENST00000635988 NBPF19A0A087WUL8 3843 aa9.89□□□□□ -0.83
CACNA1A-220ENST00000635988 CACNA1AO00555 2505 aa9.89□□□□□ -0.83
CACNA1A-220ENST00000635988 VPREB1P12018 145 aa9.88□□□□□ -0.83
CACNA1A-220ENST00000635988 TMEM254Q8TBM7 123 aa9.88□□□□□ -0.83
CACNA1A-220ENST00000635988 ABCA12Q86UK0 2595 aa9.87□□□□□ -0.83
CACNA1A-220ENST00000635988 SPART-AS1P0CW21 52 aa9.87□□□□□ -0.83
CACNA1A-220ENST00000635988 KRTAP1-1Q07627 177 aa9.87□□□□□ -0.83
CACNA1A-220ENST00000635988 EGFEM1PQ0D2K5 195 aa9.87□□□□□ -0.83
CACNA1A-220ENST00000635988 FN1P02751 2386 aaKnown RBP9.86□□□□□ -0.83
CACNA1A-220ENST00000635988 FP248Q71RG6 208 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-220ENST00000635988 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
CACNA1A-220ENST00000635988 PIEZO1Q92508 2521 aa9.86□□□□□ -0.83
CACNA1A-220ENST00000635988 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
CACNA1A-220ENST00000635988 CENPEQ02224 2701 aa9.85□□□□□ -0.83
CACNA1A-220ENST00000635988 CELA1Q9UNI1 258 aa9.85□□□□□ -0.83
CACNA1A-220ENST00000635988 Q8NAQ8 132 aa9.85□□□□□ -0.83
CACNA1A-220ENST00000635988 HTN3P15516 51 aa9.84□□□□□ -0.83
CACNA1A-220ENST00000635988 NF1P21359 2839 aa9.83□□□□□ -0.84
CACNA1A-220ENST00000635988 IGKV4-1P06312 121 aa9.83□□□□□ -0.84
CACNA1A-220ENST00000635988 ITPR3Q14573 2671 aa9.83□□□□□ -0.84
CACNA1A-220ENST00000635988 NIPBLQ6KC79 2804 aaeCLIP9.82□□□□□ -0.84
CACNA1A-220ENST00000635988 HIGD2BQ4VC39 106 aa9.82□□□□□ -0.84
CACNA1A-220ENST00000635988 ZNF462Q96JM2 2506 aa9.82□□□□□ -0.84
CACNA1A-220ENST00000635988 KRTAP10-3P60369 221 aa9.82□□□□□ -0.84
CACNA1A-220ENST00000635988 OCR1Q9BZK8 76 aa9.81□□□□□ -0.84
CACNA1A-220ENST00000635988 PKIGQ9Y2B9 76 aa9.81□□□□□ -0.84
CACNA1A-220ENST00000635988 SETD2Q9BYW2 2564 aaPredicted RBP9.8□□□□□ -0.84
CACNA1A-220ENST00000635988 CUBNO60494 3623 aa9.8□□□□□ -0.84
CACNA1A-220ENST00000635988 PRYO14603 147 aa9.8□□□□□ -0.84
CACNA1A-220ENST00000635988 A0A0U1RQV1 116 aa9.8□□□□□ -0.84
CACNA1A-220ENST00000635988 UBR5O95071 2799 aaPredicted RBP9.79□□□□□ -0.84
CACNA1A-220ENST00000635988 A0A1B0GW54 56 aa9.79□□□□□ -0.84
CACNA1A-220ENST00000635988 Q6ZRU5 148 aa9.78□□□□□ -0.84
CACNA1A-220ENST00000635988 Q8N9L7 120 aa9.78□□□□□ -0.84
CACNA1A-220ENST00000635988 ZFYVE26Q68DK2 2539 aa9.78□□□□□ -0.84
CACNA1A-220ENST00000635988 LINC00474Q9P2X8 69 aa9.77□□□□□ -0.85
CACNA1A-220ENST00000635988 ZNF469Q96JG9 3925 aaPredicted RBP9.76□□□□□ -0.85
CACNA1A-220ENST00000635988 FUSP35637 526 aaKnown RBP eCLIP9.76□□□□□ -0.85
CACNA1A-220ENST00000635988 KRTAP26-1Q6PEX3 210 aa9.76□□□□□ -0.85
CACNA1A-220ENST00000635988 CCDC168Q8NDH2 2452 aa9.75□□□□□ -0.85
CACNA1A-220ENST00000635988 APCP25054 2843 aa9.75□□□□□ -0.85
CACNA1A-220ENST00000635988 IGLV5-48A0A075B6I7 105 aa9.75□□□□□ -0.85
CACNA1A-220ENST00000635988 FLNAP21333 2647 aaKnown RBP9.74□□□□□ -0.85
CACNA1A-220ENST00000635988 KCNQ1DNQ9H478 68 aa9.74□□□□□ -0.85
CACNA1A-220ENST00000635988 V9GYY9 64 aa9.74□□□□□ -0.85
CACNA1A-220ENST00000635988 GCN1Q92616 2671 aaKnown RBP9.74□□□□□ -0.85
CACNA1A-220ENST00000635988 H3BNG1 76 aa9.74□□□□□ -0.85
CACNA1A-220ENST00000635988 C15orf56Q8N910 161 aa9.74□□□□□ -0.85
CACNA1A-220ENST00000635988 BRK1Q8WUW1 75 aa9.74□□□□□ -0.85
CACNA1A-220ENST00000635988 C3orf84H3BNL1 204 aa9.73□□□□□ -0.85
CACNA1A-220ENST00000635988 KPRPQ5T749 579 aaPredicted RBP9.72□□□□□ -0.85
CACNA1A-220ENST00000635988 C1orf195Q5TG92 126 aa9.72□□□□□ -0.85
CACNA1A-220ENST00000635988 WFDC10BQ8IUB3 73 aa9.72□□□□□ -0.85
CACNA1A-220ENST00000635988 ESRGQ1W209 222 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms