RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	HSPB8	Q9UJY1	196 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	FAT4	Q6V0I7	4981 aa		3.84	□□□□□ -1.79
SMARCA2-223	ENST00000634435	UMAD1	C9J7I0	102 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435		I3L3M4	83 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	UBE2A	P49459	152 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	GNG4	P50150	75 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	SPAG11B	Q08648	103 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	TSKU	Q8WUA8	353 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	MBD3L1	Q8WWY6	194 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	CNFN	Q9BYD5	112 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	RNASE7	Q9H1E1	156 aa	Known RBP	3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	MANBAL	Q9NQG1	85 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	TMEM242	Q9NWH2	141 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	GNG13	Q9P2W3	67 aa		3.83	□□□□□ -1.8
SMARCA2-223	ENST00000634435	FAM236D	A0A1B0GTK5	79 aa		3.82	□□□□□ -1.8
SMARCA2-223	ENST00000634435	C7orf77	A4D0Y5	90 aa		3.82	□□□□□ -1.8
SMARCA2-223	ENST00000634435	FAM236C	P0DP71	79 aa		3.82	□□□□□ -1.8
SMARCA2-223	ENST00000634435	KRTAP10-12	P60413	245 aa		3.82	□□□□□ -1.8
SMARCA2-223	ENST00000634435	CCL20	P78556	96 aa		3.82	□□□□□ -1.8
SMARCA2-223	ENST00000634435	TEX261	Q6UWH6	196 aa		3.82	□□□□□ -1.8
SMARCA2-223	ENST00000634435	C9orf62	Q8N4C0	152 aa		3.82	□□□□□ -1.8
SMARCA2-223	ENST00000634435	TRBV20OR9-2	A0A075B6H5	130 aa		3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435	TRAV13-1	A0A0B4J241	112 aa		3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435	C1orf196	B1AJZ1	125 aa		3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435		G3V3Q6	166 aa		3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435	DDT	P30046	118 aa		3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435	FOXA3	P55318	350 aa	Predicted RBP	3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435	UBE2B	P63146	152 aa		3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435	RPP21	Q9H633	154 aa	Known RBP	3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435	ST20	Q9HBF5	79 aa		3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435	CDC42SE2	Q9NRR3	84 aa		3.81	□□□□□ -1.8
SMARCA2-223	ENST00000634435	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435		A0A1B0GXF2	115 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435		J3KT08	172 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	NDUFS5	O43920	106 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	PSMB2	P49721	201 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	ZNF345	Q14585	488 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	RNASE13	Q5GAN3	156 aa	Known RBP	3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	SCGB1D4	Q6XE38	83 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	C5orf38	Q86SI9	138 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	KRTAP11-1	Q8IUC1	163 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	PCP2	Q8IVA1	136 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	IMMP2L	Q96T52	175 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	MED9	Q9NWA0	146 aa		3.8	□□□□□ -1.8
SMARCA2-223	ENST00000634435	TRBV6-5	A0A0K0K1A5	114 aa		3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	KANTR	A0A1W2PQU2	76 aa		3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	C8orf87	E5RJ46	101 aa		3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	NDUFA1	O15239	70 aa		3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	NDUFC2	O95298	119 aa		3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	FCER1G	P30273	86 aa		3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	RPS28	P62857	69 aa	Known RBP	3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	OR10D4P	Q8NGN7	298 aa		3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	ORAOV1	Q8WV07	137 aa		3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	GNB1L	Q9BYB4	327 aa		3.79	□□□□□ -1.8
SMARCA2-223	ENST00000634435	TRBV27	A0A0K0K1C4	114 aa		3.78	□□□□□ -1.8
SMARCA2-223	ENST00000634435		A0A1B0GX51	115 aa		3.78	□□□□□ -1.8
SMARCA2-223	ENST00000634435	KRTAP5-9	P26371	169 aa		3.78	□□□□□ -1.8
SMARCA2-223	ENST00000634435	ORMDL2	Q53FV1	153 aa		3.78	□□□□□ -1.8
SMARCA2-223	ENST00000634435	KRTAP5-4	Q6L8H1	288 aa		3.78	□□□□□ -1.8
SMARCA2-223	ENST00000634435		Q6ZUT4	128 aa		3.78	□□□□□ -1.8
SMARCA2-223	ENST00000634435	MRPL35	Q9NZE8	188 aa	Known RBP	3.78	□□□□□ -1.8
SMARCA2-223	ENST00000634435	C20orf202	A1L168	122 aa		3.77	□□□□□ -1.81
SMARCA2-223	ENST00000634435		A8MU10	97 aa		3.77	□□□□□ -1.81
SMARCA2-223	ENST00000634435	JOSD1	Q15040	202 aa	Predicted RBP	3.77	□□□□□ -1.81
SMARCA2-223	ENST00000634435	SMDT1	Q9H4I9	107 aa		3.77	□□□□□ -1.81
SMARCA2-223	ENST00000634435	ANAPC11	Q9NYG5	84 aa		3.77	□□□□□ -1.81
SMARCA2-223	ENST00000634435	UBE2D4	Q9Y2X8	147 aa		3.77	□□□□□ -1.81
SMARCA2-223	ENST00000634435	TLX1NB	P0CAT3	122 aa		3.76	□□□□□ -1.81
SMARCA2-223	ENST00000634435	POLR2K	P53803	58 aa	Known RBP	3.76	□□□□□ -1.81
SMARCA2-223	ENST00000634435	RHEB	Q15382	184 aa		3.76	□□□□□ -1.81
SMARCA2-223	ENST00000634435	OCIAD2	Q56VL3	154 aa		3.76	□□□□□ -1.81
SMARCA2-223	ENST00000634435	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.76	□□□□□ -1.81
SMARCA2-223	ENST00000634435	C6orf48	Q9UBA6	75 aa		3.76	□□□□□ -1.81
SMARCA2-223	ENST00000634435		A8MWL6	223 aa		3.75	□□□□□ -1.81
SMARCA2-223	ENST00000634435	TMEM241	Q24JQ0	296 aa		3.75	□□□□□ -1.81
SMARCA2-223	ENST00000634435	AMN1	Q8IY45	258 aa		3.75	□□□□□ -1.81
SMARCA2-223	ENST00000634435	ANKRD29	Q8N6D5	301 aa		3.75	□□□□□ -1.81
SMARCA2-223	ENST00000634435	FAM104A	Q969W3	186 aa		3.75	□□□□□ -1.81
SMARCA2-223	ENST00000634435	RETNLB	Q9BQ08	111 aa		3.75	□□□□□ -1.81
SMARCA2-223	ENST00000634435	KRTAP4-4	Q9BYR3	166 aa		3.75	□□□□□ -1.81
SMARCA2-223	ENST00000634435	TMEM191A	Q9H0A3	160 aa		3.75	□□□□□ -1.81
SMARCA2-223	ENST00000634435	ERG28	Q9UKR5	140 aa		3.75	□□□□□ -1.81
SMARCA2-223	ENST00000634435		A0A1B0GUT8	65 aa		3.74	□□□□□ -1.81
SMARCA2-223	ENST00000634435	PPP1R17	O96001	155 aa		3.74	□□□□□ -1.81
SMARCA2-223	ENST00000634435	CRYGA	P11844	174 aa		3.74	□□□□□ -1.81
SMARCA2-223	ENST00000634435	PLEKHB2	Q96CS7	222 aa		3.74	□□□□□ -1.81
SMARCA2-223	ENST00000634435	TIMM17A	Q99595	171 aa		3.74	□□□□□ -1.81
SMARCA2-223	ENST00000634435	TIMM21	Q9BVV7	248 aa		3.74	□□□□□ -1.81
SMARCA2-223	ENST00000634435	LAMTOR2	Q9Y2Q5	125 aa		3.74	□□□□□ -1.81
SMARCA2-223	ENST00000634435	SMIM26	A0A096LP01	95 aa		3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435	TRBV30	A0A0K0K1B3	111 aa		3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435		A0A1B0GVX0	72 aa		3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435	HMSD	A8MTL9	139 aa		3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435	HIGD1C	A8MV81	97 aa		3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435	NDUFC2-KCTD14	E9PQ53	114 aa		3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435	NUPR1	O60356	82 aa		3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435	RPL39	P62891	51 aa	Known RBP	3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435	HBB	P68871	147 aa		3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435	ATP5L2	Q7Z4Y8	100 aa		3.73	□□□□□ -1.81
SMARCA2-223	ENST00000634435		A0A096LNJ9	63 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms