RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 Q6ZPA2 131 aa4.51□□□□□ -1.69
SRGAP1-207ENST00000631006 Q8N3U1 123 aa4.51□□□□□ -1.69
SRGAP1-207ENST00000631006 KRTAP24-1Q3LI83 254 aa4.5□□□□□ -1.69
SRGAP1-207ENST00000631006 TP53AIP1Q9HCN2 124 aa4.5□□□□□ -1.69
SRGAP1-207ENST00000631006 ANKRD11Q6UB99 2663 aaPredicted RBP4.5□□□□□ -1.69
SRGAP1-207ENST00000631006 GAS8-AS1O95177 125 aa4.5□□□□□ -1.69
SRGAP1-207ENST00000631006 C6orf48Q9UBA6 75 aa4.5□□□□□ -1.69
SRGAP1-207ENST00000631006 A8MTW9 85 aa4.5□□□□□ -1.69
SRGAP1-207ENST00000631006 KIAA0087Q14695 138 aa4.5□□□□□ -1.69
SRGAP1-207ENST00000631006 Q6ZSN1 163 aa4.49□□□□□ -1.69
SRGAP1-207ENST00000631006 A0A1B0GW54 56 aa4.49□□□□□ -1.69
SRGAP1-207ENST00000631006 CDIP1Q9H305 208 aa4.49□□□□□ -1.69
SRGAP1-207ENST00000631006 ZNF580Q9UK33 172 aa4.49□□□□□ -1.69
SRGAP1-207ENST00000631006 LINC00167Q96N53 147 aa4.49□□□□□ -1.69
SRGAP1-207ENST00000631006 COL27A1Q8IZC6 1860 aaPredicted RBP4.49□□□□□ -1.69
SRGAP1-207ENST00000631006 Q9UF83 564 aa4.48□□□□□ -1.69
SRGAP1-207ENST00000631006 PKD1L2Q7Z442 2459 aa4.48□□□□□ -1.69
SRGAP1-207ENST00000631006 SPAG11AQ6PDA7 123 aa4.48□□□□□ -1.69
SRGAP1-207ENST00000631006 FASNP49327 2511 aaKnown RBP4.48□□□□□ -1.69
SRGAP1-207ENST00000631006 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
SRGAP1-207ENST00000631006 PCSK5Q92824 1860 aa4.48□□□□□ -1.69
SRGAP1-207ENST00000631006 A0A087WVE0 104 aa4.48□□□□□ -1.69
SRGAP1-207ENST00000631006 BPTFQ12830 3046 aa4.47□□□□□ -1.69
SRGAP1-207ENST00000631006 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
SRGAP1-207ENST00000631006 USP24Q9UPU5 2620 aa4.47□□□□□ -1.69
SRGAP1-207ENST00000631006 MTORP42345 2549 aa4.47□□□□□ -1.69
SRGAP1-207ENST00000631006 AMELXQ99217 191 aa4.47□□□□□ -1.69
SRGAP1-207ENST00000631006 CENPFP49454 3210 aa4.47□□□□□ -1.69
SRGAP1-207ENST00000631006 FLG2Q5D862 2391 aaPredicted RBP4.47□□□□□ -1.69
SRGAP1-207ENST00000631006 SMIM29Q86T20 159 aa4.46□□□□□ -1.7
SRGAP1-207ENST00000631006 EPM2AB3EWF7 344 aa4.46□□□□□ -1.7
SRGAP1-207ENST00000631006 ADAMTSL4-AS1Q5T5F5 129 aa4.46□□□□□ -1.7
SRGAP1-207ENST00000631006 BCE1O60756 84 aa4.46□□□□□ -1.7
SRGAP1-207ENST00000631006 CRIP3Q6Q6R5 217 aa4.46□□□□□ -1.7
SRGAP1-207ENST00000631006 H3BNG1 76 aa4.45□□□□□ -1.7
SRGAP1-207ENST00000631006 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
SRGAP1-207ENST00000631006 COX8CQ7Z4L0 72 aa4.45□□□□□ -1.7
SRGAP1-207ENST00000631006 A0A1W2PPR1 153 aa4.45□□□□□ -1.7
SRGAP1-207ENST00000631006 C2orf91Q6ZV80 131 aa4.45□□□□□ -1.7
SRGAP1-207ENST00000631006 TRAV22A0A0B4J277 110 aa4.44□□□□□ -1.7
SRGAP1-207ENST00000631006 TSPEAR-AS2P59090 65 aa4.44□□□□□ -1.7
SRGAP1-207ENST00000631006 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
SRGAP1-207ENST00000631006 CXCL6P80162 114 aa4.44□□□□□ -1.7
SRGAP1-207ENST00000631006 APLNQ9ULZ1 77 aa4.44□□□□□ -1.7
SRGAP1-207ENST00000631006 LINC00588Q9Y4M8 146 aa4.43□□□□□ -1.7
SRGAP1-207ENST00000631006 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
SRGAP1-207ENST00000631006 RBM12B-AS1Q9P1G2 102 aa4.43□□□□□ -1.7
SRGAP1-207ENST00000631006 CHD8Q9HCK8 2581 aa4.43□□□□□ -1.7
SRGAP1-207ENST00000631006 C9orf92A6NGG3 77 aa4.43□□□□□ -1.7
SRGAP1-207ENST00000631006 LINC00476Q8WZB0 136 aa4.42□□□□□ -1.7
SRGAP1-207ENST00000631006 C8orf87E5RJ46 101 aa4.42□□□□□ -1.7
SRGAP1-207ENST00000631006 RPS28P62857 69 aaKnown RBP4.41□□□□□ -1.7
SRGAP1-207ENST00000631006 EP400Q96L91 3159 aa4.41□□□□□ -1.7
SRGAP1-207ENST00000631006 SPATA3Q8NHX4 192 aa4.41□□□□□ -1.7
SRGAP1-207ENST00000631006 USP9YO00507 2555 aaPredicted RBP4.41□□□□□ -1.7
SRGAP1-207ENST00000631006 IGLV5-37A0A075B6J1 123 aa4.41□□□□□ -1.7
SRGAP1-207ENST00000631006 SMR3BP02814 79 aaPredicted RBP4.41□□□□□ -1.7
SRGAP1-207ENST00000631006 ST20-AS1Q8NBB2 130 aa4.41□□□□□ -1.7
SRGAP1-207ENST00000631006 Q6ZRX8 168 aa4.4□□□□□ -1.7
SRGAP1-207ENST00000631006 SSBP3-AS1Q7Z2R9 100 aa4.4□□□□□ -1.71
SRGAP1-207ENST00000631006 C11orf72Q8NBR9 251 aa4.4□□□□□ -1.71
SRGAP1-207ENST00000631006 ELOF1P60002 83 aaKnown RBP4.39□□□□□ -1.71
SRGAP1-207ENST00000631006 LINC01546A6NGU7 62 aa4.39□□□□□ -1.71
SRGAP1-207ENST00000631006 LINC00336Q6ZUF6 198 aa4.39□□□□□ -1.71
SRGAP1-207ENST00000631006 GOLGB1Q14789 3259 aaKnown RBP4.39□□□□□ -1.71
SRGAP1-207ENST00000631006 FAM19A4Q96LR4 140 aa4.39□□□□□ -1.71
SRGAP1-207ENST00000631006 LINC00846Q9NV44 126 aa4.38□□□□□ -1.71
SRGAP1-207ENST00000631006 CRIPTQ9P021 101 aa4.38□□□□□ -1.71
SRGAP1-207ENST00000631006 CEP295Q9C0D2 2601 aa4.38□□□□□ -1.71
SRGAP1-207ENST00000631006 PRRC2CQ9Y520 2896 aaKnown RBP4.38□□□□□ -1.71
SRGAP1-207ENST00000631006 H3BPC8 53 aa4.38□□□□□ -1.71
SRGAP1-207ENST00000631006 LOC101927531A0A1B0GV80 90 aa4.37□□□□□ -1.71
SRGAP1-207ENST00000631006 M0R2T5 61 aa4.37□□□□□ -1.71
SRGAP1-207ENST00000631006 GVQW2A0A096LPI5 108 aaPredicted RBP4.37□□□□□ -1.71
SRGAP1-207ENST00000631006 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
SRGAP1-207ENST00000631006 LINC01554Q52M75 96 aa4.37□□□□□ -1.71
SRGAP1-207ENST00000631006 OBSCN-AS1Q96MR7 158 aa4.37□□□□□ -1.71
SRGAP1-207ENST00000631006 DSCR10P59022 87 aa4.37□□□□□ -1.71
SRGAP1-207ENST00000631006 Q8NAQ8 132 aa4.36□□□□□ -1.71
SRGAP1-207ENST00000631006 IGLV6-57P01721 117 aa4.36□□□□□ -1.71
SRGAP1-207ENST00000631006 TM2D3Q9BRN9 247 aa4.36□□□□□ -1.71
SRGAP1-207ENST00000631006 IGHV3OR16-9A0A0B4J2B5 98 aa4.35□□□□□ -1.71
SRGAP1-207ENST00000631006 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
SRGAP1-207ENST00000631006 MRPL34Q9BQ48 92 aaKnown RBP4.35□□□□□ -1.71
SRGAP1-207ENST00000631006 FAM168BA1KXE4 195 aa4.35□□□□□ -1.71
SRGAP1-207ENST00000631006 IGLV5-39A0A0G2JS06 123 aa4.34□□□□□ -1.71
SRGAP1-207ENST00000631006 LINC01600Q96MT4 127 aa4.34□□□□□ -1.71
SRGAP1-207ENST00000631006 K7EIL1 84 aa4.34□□□□□ -1.71
SRGAP1-207ENST00000631006 A8MWP4 228 aa4.34□□□□□ -1.72
SRGAP1-207ENST00000631006 KRTAP10-11P60412 298 aa4.32□□□□□ -1.72
SRGAP1-207ENST00000631006 LINC00528Q8N1L1 170 aa4.32□□□□□ -1.72
SRGAP1-207ENST00000631006 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
SRGAP1-207ENST00000631006 ZNF861PO60384 105 aa4.31□□□□□ -1.72
SRGAP1-207ENST00000631006 A0A087WTM6 91 aa4.31□□□□□ -1.72
SRGAP1-207ENST00000631006 ERC2-IT1O76042 136 aa4.31□□□□□ -1.72
SRGAP1-207ENST00000631006 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
SRGAP1-207ENST00000631006 Q6ZQT0 140 aa4.31□□□□□ -1.72
SRGAP1-207ENST00000631006 TRBV7-4A0A0J9YYF1 115 aa4.31□□□□□ -1.72
SRGAP1-207ENST00000631006 K7EQZ3 153 aa4.31□□□□□ -1.72
SRGAP1-207ENST00000631006 Q6ZSA8 131 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms