RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 FER1L6-AS1Q8NA97 138 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 OR2D3Q8NGH3 330 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 OR5A1Q8NGJ0 315 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 OR10AG1Q8NH19 301 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 SPACA4Q8TDM5 124 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 SFT2D1Q8WV19 159 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 MBD3L1Q8WWY6 194 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 DIRC1Q969H9 104 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 BORCS7Q96B45 105 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 SMIM12Q96EX1 92 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 IMMP2LQ96T52 175 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 MAP1LC3BQ9GZQ8 125 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 MANBALQ9NQG1 85 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 NIT2Q9NQR4 276 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 APOBP04114 4563 aaKnown RBP0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 HERC1Q15751 4861 aa0.46□□□□□ -2.34
PTP4A2-220ENST00000627328 FAT1Q14517 4588 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 FXYD6-FXYD2A0A087WZ82 144 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 A0A096LNI7 61 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 IGKV3OR2-268A0A0C4DH90 116 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 MUC21A0A0G2JKD1 596 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 TRBV6-5A0A0K0K1A5 114 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 TRBV30A0A0K0K1B3 111 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 TRBV27A0A0K0K1C4 114 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 MUC21A0A140T8X8 626 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 LINC00959A0A1B0GUT2 108 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 A0A1B0GUT8 65 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 A0A1B0GW15 77 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 C7orf77A4D0Y5 90 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 RAB19A4D1S5 217 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 LINC00862A6NCI5 91 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 HMSDA8MTL9 139 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 F8W036 122 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 TMEM250H0YL14 139 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 NDUFA1O15239 70 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 ARPC5O15511 151 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 NUPR1O60356 82 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 S100A8P05109 93 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 MGPP08493 103 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 IGLC6P0CF74 106 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 ESDP10768 282 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 G0S2P27469 103 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 FCER1GP30273 86 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 RPL35P42766 123 aaKnown RBP0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 XCL1P47992 114 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 UBE2D1P51668 147 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 NKX2-5P52952 324 aaPredicted RBP0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 POLR2KP53803 58 aaKnown RBP0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 FOXA3P55318 350 aaPredicted RBP0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 CCL20P78556 96 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 ZNF345Q14585 488 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 C1orf137Q5JT78 98 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 RPL7L1Q6DKI1 246 aaKnown RBP0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 KRTAP26-1Q6PEX3 210 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 CLPSL2Q6UWE3 100 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 LYZL1Q6UWQ5 148 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 MRPL52Q86TS9 123 aaKnown RBP0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 KCNRGQ8N5I3 272 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 GATD1Q8NB37 220 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 FAM213BQ8TBF2 198 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 LINC00526Q96FQ7 95 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 MRAP2Q96G30 205 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 CARD19Q96LW7 228 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 PACRGQ96M98 296 aaPredicted RBP0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 YPEL4Q96NS1 127 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 C20orf78Q9BR46 151 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 TIMM21Q9BVV7 248 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 CNFNQ9BYD5 112 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 TMEM191AQ9H0A3 160 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 ST20Q9HBF5 79 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 BATF3Q9NR55 127 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 CDC42SE2Q9NRR3 84 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 MED9Q9NWA0 146 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 MRPL35Q9NZE8 188 aaKnown RBP0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 ALG5Q9Y673 324 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 ABCA13Q86UQ4 5058 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 FAT3Q8TDW7 4589 aa0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 LRP1Q07954 4544 aaKnown RBP0.45□□□□□ -2.34
PTP4A2-220ENST00000627328 DNAH5Q8TE73 4624 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 TRBV20OR9-2A0A075B6H5 130 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 IGKV2D-26A0A0A0MRZ7 120 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 TGIF2-C20orf24A0A0A6YYL0 155 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 TRAV13-1A0A0B4J241 112 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 A0A1B0GV50 99 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 A0A1B0GVG6 124 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 A6NED7 52 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 LINC01549A6NIU2 74 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 ZNF727A8MUV8 499 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 HIGD1CA8MV81 97 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 K7EMI3 77 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 M0QXV9 152 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 GATCO43716 136 aaKnown RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 BCE1O60756 84 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 PPBPP02775 128 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 BCL2P10415 239 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 CRYGAP11844 174 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 CKS2P33552 79 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 IFI27P40305 119 aaPredicted RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms