RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.65□□□□□ -2.51
CDR1-202ENST00000625883 HECTD1Q9ULT8 2610 aa-0.65□□□□□ -2.51
CDR1-202ENST00000625883 S100PP25815 95 aa-0.66□□□□□ -2.51
CDR1-202ENST00000625883 C6orf201Q7Z4U5 140 aa-0.66□□□□□ -2.51
CDR1-202ENST00000625883 LAMA2P24043 3122 aaKnown RBP-0.66□□□□□ -2.52
CDR1-202ENST00000625883 USP9XQ93008 2570 aaPredicted RBP-0.66□□□□□ -2.52
CDR1-202ENST00000625883 TRBV25-1A0A075B6N4 114 aa-0.67□□□□□ -2.52
CDR1-202ENST00000625883 NDUFC1O43677 76 aa-0.67□□□□□ -2.52
CDR1-202ENST00000625883 C14orf144Q96I85 54 aa-0.67□□□□□ -2.52
CDR1-202ENST00000625883 ANKRD36A6QL64 1941 aa-0.67□□□□□ -2.52
CDR1-202ENST00000625883 DNAH6Q9C0G6 4158 aa-0.67□□□□□ -2.52
CDR1-202ENST00000625883 SLIT1O75093 1534 aa-0.67□□□□□ -2.52
CDR1-202ENST00000625883 EDC4Q6P2E9 1401 aaKnown RBP-0.67□□□□□ -2.52
CDR1-202ENST00000625883 KRTAP6-2Q3LI66 62 aa-0.67□□□□□ -2.52
CDR1-202ENST00000625883 DEFB107AQ8IZN7 70 aa-0.67□□□□□ -2.52
CDR1-202ENST00000625883 FASNP49327 2511 aaKnown RBP-0.68□□□□□ -2.52
CDR1-202ENST00000625883 NBPF19A0A087WUL8 3843 aa-0.68□□□□□ -2.52
CDR1-202ENST00000625883 SHPRHQ149N8 1683 aa-0.68□□□□□ -2.52
CDR1-202ENST00000625883 DSPP15924 2871 aaKnown RBP-0.68□□□□□ -2.52
CDR1-202ENST00000625883 PRDM15P57071 1507 aaPredicted RBP-0.68□□□□□ -2.52
CDR1-202ENST00000625883 CCDC141Q6ZP82 1450 aa-0.68□□□□□ -2.52
CDR1-202ENST00000625883 MLH3Q9UHC1 1453 aa-0.68□□□□□ -2.52
CDR1-202ENST00000625883 TMEM218A2RU14 115 aa-0.68□□□□□ -2.52
CDR1-202ENST00000625883 H3BQF6 201 aa-0.68□□□□□ -2.52
CDR1-202ENST00000625883 H7BZZ5 65 aa-0.68□□□□□ -2.52
CDR1-202ENST00000625883 H1FX-AS1Q4G0G2 97 aa-0.68□□□□□ -2.52
CDR1-202ENST00000625883 PSMG4Q5JS54 123 aa-0.68□□□□□ -2.52
CDR1-202ENST00000625883 ABCA13Q86UQ4 5058 aa-0.69□□□□□ -2.52
CDR1-202ENST00000625883 H0Y9P7 68 aa-0.69□□□□□ -2.52
CDR1-202ENST00000625883 MT-ATP8P03928 68 aa-0.69□□□□□ -2.52
CDR1-202ENST00000625883 PMCHL1Q16048 86 aa-0.69□□□□□ -2.52
CDR1-202ENST00000625883 TRGV9Q99603 122 aa-0.69□□□□□ -2.52
CDR1-202ENST00000625883 KIAA1551Q9HCM1 1747 aa-0.7□□□□□ -2.52
CDR1-202ENST00000625883 REV3LO60673 3130 aa-0.7□□□□□ -2.52
CDR1-202ENST00000625883 MXRA5Q9NR99 2828 aa-0.7□□□□□ -2.52
CDR1-202ENST00000625883 LRRC37AA6NMS7 1700 aa-0.7□□□□□ -2.52
CDR1-202ENST00000625883 MON2Q7Z3U7 1717 aa-0.7□□□□□ -2.52
CDR1-202ENST00000625883 CUX1P39880 1505 aa-0.71□□□□□ -2.52
CDR1-202ENST00000625883 DEFB135Q30KP9 77 aa-0.71□□□□□ -2.52
CDR1-202ENST00000625883 SPTBN4Q9H254 2564 aa-0.71□□□□□ -2.52
CDR1-202ENST00000625883 DNHD1Q96M86 4753 aa-0.72□□□□□ -2.52
CDR1-202ENST00000625883 PKHD1L1Q86WI1 4243 aa-0.72□□□□□ -2.52
CDR1-202ENST00000625883 TRAV30A0A087WSZ9 112 aa-0.72□□□□□ -2.52
CDR1-202ENST00000625883 I3L3M4 83 aa-0.72□□□□□ -2.52
CDR1-202ENST00000625883 PMCHL2Q9BQD1 86 aa-0.72□□□□□ -2.52
CDR1-202ENST00000625883 PKD1P98161 4303 aa-0.72□□□□□ -2.52
CDR1-202ENST00000625883 MYO18BQ8IUG5 2567 aa-0.72□□□□□ -2.52
CDR1-202ENST00000625883 C5P01031 1676 aa-0.72□□□□□ -2.53
CDR1-202ENST00000625883 SPRR2AP35326 72 aa-0.73□□□□□ -2.53
CDR1-202ENST00000625883 S100A10P60903 97 aa-0.73□□□□□ -2.53
CDR1-202ENST00000625883 GNGT1P63211 74 aa-0.73□□□□□ -2.53
CDR1-202ENST00000625883 ANKRD36BQ8N2N9 1353 aa-0.73□□□□□ -2.53
CDR1-202ENST00000625883 AKAP13Q12802 2813 aa-0.73□□□□□ -2.53
CDR1-202ENST00000625883 SPRR2EP22531 72 aa-0.73□□□□□ -2.53
CDR1-202ENST00000625883 TCEAL7Q9BRU2 100 aa-0.73□□□□□ -2.53
CDR1-202ENST00000625883 FAT3Q8TDW7 4589 aa-0.74□□□□□ -2.53
CDR1-202ENST00000625883 DNAH3Q8TD57 4116 aa-0.74□□□□□ -2.53
CDR1-202ENST00000625883 ATP6V1G2-DDX39BF2Z307 99 aa-0.74□□□□□ -2.53
CDR1-202ENST00000625883 MPC2O95563 127 aa-0.74□□□□□ -2.53
CDR1-202ENST00000625883 UQCRHP07919 91 aa-0.74□□□□□ -2.53
CDR1-202ENST00000625883 COL14A1Q05707 1796 aaKnown RBP-0.75□□□□□ -2.53
CDR1-202ENST00000625883 MUC17Q685J3 4493 aa-0.75□□□□□ -2.53
CDR1-202ENST00000625883 NRXN1Q9ULB1 1477 aa-0.75□□□□□ -2.53
CDR1-202ENST00000625883 ARMS2P0C7Q2 107 aa-0.75□□□□□ -2.53
CDR1-202ENST00000625883 LELP1Q5T871 98 aa-0.75□□□□□ -2.53
CDR1-202ENST00000625883 MRPL34Q9BQ48 92 aaKnown RBP-0.75□□□□□ -2.53
CDR1-202ENST00000625883 TRANK1O15050 2925 aa-0.76□□□□□ -2.53
CDR1-202ENST00000625883 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.76□□□□□ -2.53
CDR1-202ENST00000625883 KNL1Q8NG31 2342 aa-0.76□□□□□ -2.53
CDR1-202ENST00000625883 ATOX1O00244 68 aa-0.76□□□□□ -2.53
CDR1-202ENST00000625883 SERP2Q8N6R1 65 aa-0.76□□□□□ -2.53
CDR1-202ENST00000625883 AP4S1Q9Y587 144 aa-0.76□□□□□ -2.53
CDR1-202ENST00000625883 VPS13DQ5THJ4 4388 aa-0.77□□□□□ -2.53
CDR1-202ENST00000625883 NIPBLQ6KC79 2804 aaeCLIP-0.77□□□□□ -2.53
CDR1-202ENST00000625883 RAPGEF2Q9Y4G8 1499 aa-0.77□□□□□ -2.53
CDR1-202ENST00000625883 NBASA2RRP1 2371 aa-0.77□□□□□ -2.53
CDR1-202ENST00000625883 WDR87Q6ZQQ6 2873 aa-0.77□□□□□ -2.53
CDR1-202ENST00000625883 PRRC2CQ9Y520 2896 aaKnown RBP-0.77□□□□□ -2.53
CDR1-202ENST00000625883 CELSR3Q9NYQ7 3312 aa-0.78□□□□□ -2.53
CDR1-202ENST00000625883 SAMD9Q5K651 1589 aa-0.78□□□□□ -2.53
CDR1-202ENST00000625883 PEG3Q9GZU2 1588 aa-0.78□□□□□ -2.53
CDR1-202ENST00000625883 RBP2P50120 134 aa-0.78□□□□□ -2.53
CDR1-202ENST00000625883 C9orf62Q8N4C0 152 aa-0.78□□□□□ -2.53
CDR1-202ENST00000625883 TNRC18O15417 2968 aaPredicted RBP-0.79□□□□□ -2.54
CDR1-202ENST00000625883 PLECQ15149 4684 aaKnown RBP-0.79□□□□□ -2.54
CDR1-202ENST00000625883 ABCC2Q92887 1545 aa-0.79□□□□□ -2.54
CDR1-202ENST00000625883 COL6A5A8TX70 2615 aa-0.79□□□□□ -2.54
CDR1-202ENST00000625883 KIF20BQ96Q89 1820 aa-0.79□□□□□ -2.54
CDR1-202ENST00000625883 DNAH9Q9NYC9 4486 aa-0.79□□□□□ -2.54
CDR1-202ENST00000625883 AKAP9Q99996 3911 aa-0.79□□□□□ -2.54
CDR1-202ENST00000625883 TRBV7-7A0A0K0K1E9 115 aa-0.8□□□□□ -2.54
CDR1-202ENST00000625883 DEFB112Q30KQ8 113 aa-0.8□□□□□ -2.54
CDR1-202ENST00000625883 HEPN1Q6WQI6 88 aa-0.8□□□□□ -2.54
CDR1-202ENST00000625883 BCORQ6W2J9 1755 aa-0.8□□□□□ -2.54
CDR1-202ENST00000625883 SPTY2D1-AS1A0A0U1RR47 76 aa-0.8□□□□□ -2.54
CDR1-202ENST00000625883 CNTLNQ9NXG0 1405 aa-0.8□□□□□ -2.54
CDR1-202ENST00000625883 CRYBG1Q9Y4K1 1723 aa-0.81□□□□□ -2.54
CDR1-202ENST00000625883 FYCO1Q9BQS8 1478 aa-0.81□□□□□ -2.54
CDR1-202ENST00000625883 COL12A1Q99715 3063 aa-0.81□□□□□ -2.54
CDR1-202ENST00000625883 NBEAL2Q6ZNJ1 2754 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms