RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 COX17Q14061 63 aa5.22□□□□□ -1.57
PCDHB9-202ENST00000623266 C18orf32Q8TCD1 76 aa5.22□□□□□ -1.57
PCDHB9-202ENST00000623266 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 A0A0U1RQV1 116 aa5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 C11orf86A6NJI1 115 aa5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 S100PP25815 95 aa5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 CTAG1AP78358 180 aa5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 RPL24P83731 157 aaKnown RBP5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 PMCHL1Q16048 86 aa5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 TPRXLQ17RH7 258 aa5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 COX19Q49B96 90 aa5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 SMCO4Q9NRQ5 59 aa5.21□□□□□ -1.58
PCDHB9-202ENST00000623266 BAGE3Q86Y29 109 aa5.2□□□□□ -1.58
PCDHB9-202ENST00000623266 CBLN2Q8IUK8 224 aa5.2□□□□□ -1.58
PCDHB9-202ENST00000623266 CDIP1Q9H305 208 aa5.2□□□□□ -1.58
PCDHB9-202ENST00000623266 SMCPP49901 116 aaPredicted RBP5.19□□□□□ -1.58
PCDHB9-202ENST00000623266 SPRR4Q96PI1 79 aa5.19□□□□□ -1.58
PCDHB9-202ENST00000623266 PPDPFQ9H3Y8 114 aa5.19□□□□□ -1.58
PCDHB9-202ENST00000623266 A0A0U1RRA0 63 aa5.18□□□□□ -1.58
PCDHB9-202ENST00000623266 HBDP02042 147 aa5.18□□□□□ -1.58
PCDHB9-202ENST00000623266 TMEM170BQ5T4T1 132 aa5.18□□□□□ -1.58
PCDHB9-202ENST00000623266 HIGD2AQ9BW72 106 aa5.18□□□□□ -1.58
PCDHB9-202ENST00000623266 RPS10P5Q9NQ39 176 aa5.18□□□□□ -1.58
PCDHB9-202ENST00000623266 TRAPPC1Q9Y5R8 145 aa5.18□□□□□ -1.58
PCDHB9-202ENST00000623266 KRTAP4-16G5E9R7 235 aaPredicted RBP5.17□□□□□ -1.58
PCDHB9-202ENST00000623266 LINC00158P58513 81 aa5.17□□□□□ -1.58
PCDHB9-202ENST00000623266 DAND5Q8N907 189 aa5.17□□□□□ -1.58
PCDHB9-202ENST00000623266 TMEM223A0PJW6 202 aa5.16□□□□□ -1.58
PCDHB9-202ENST00000623266 SPRR1AP35321 89 aa5.16□□□□□ -1.58
PCDHB9-202ENST00000623266 SPAG11AQ6PDA7 123 aa5.16□□□□□ -1.58
PCDHB9-202ENST00000623266 SMCR5Q8TEV8 140 aa5.16□□□□□ -1.58
PCDHB9-202ENST00000623266 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
PCDHB9-202ENST00000623266 CHTOPQ9Y3Y2 248 aaKnown RBP5.16□□□□□ -1.58
PCDHB9-202ENST00000623266 SMIM13P0DJ93 91 aa5.15□□□□□ -1.59
PCDHB9-202ENST00000623266 RHEBQ15382 184 aa5.15□□□□□ -1.59
PCDHB9-202ENST00000623266 C4orf48Q5BLP8 95 aa5.15□□□□□ -1.59
PCDHB9-202ENST00000623266 COMMD7Q86VX2 200 aa5.15□□□□□ -1.59
PCDHB9-202ENST00000623266 KCNQ1DNQ9H478 68 aa5.15□□□□□ -1.59
PCDHB9-202ENST00000623266 KRTAP13-3Q3SY46 172 aa5.14□□□□□ -1.59
PCDHB9-202ENST00000623266 TRAV12-1A0A0B4J245 112 aa5.13□□□□□ -1.59
PCDHB9-202ENST00000623266 A6NJY4 79 aa5.13□□□□□ -1.59
PCDHB9-202ENST00000623266 SFTA2Q6UW10 78 aa5.13□□□□□ -1.59
PCDHB9-202ENST00000623266 BOD1L2Q8IYS8 172 aa5.13□□□□□ -1.59
PCDHB9-202ENST00000623266 MIR7-3HGQ8N6C7 128 aa5.13□□□□□ -1.59
PCDHB9-202ENST00000623266 LINC00337Q8N6G1 96 aa5.13□□□□□ -1.59
PCDHB9-202ENST00000623266 Q8NBF4 154 aa5.13□□□□□ -1.59
PCDHB9-202ENST00000623266 YPEL4Q96NS1 127 aa5.13□□□□□ -1.59
PCDHB9-202ENST00000623266 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
PCDHB9-202ENST00000623266 ERC2-IT1O76042 136 aa5.12□□□□□ -1.59
PCDHB9-202ENST00000623266 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
PCDHB9-202ENST00000623266 IFI27L1Q96BM0 104 aa5.12□□□□□ -1.59
PCDHB9-202ENST00000623266 TRBV10-3A0A0K0K1G6 114 aa5.11□□□□□ -1.59
PCDHB9-202ENST00000623266 B5MCH6 92 aa5.11□□□□□ -1.59
PCDHB9-202ENST00000623266 PRYO14603 147 aa5.11□□□□□ -1.59
PCDHB9-202ENST00000623266 ASB16-AS1Q495Z4 193 aa5.11□□□□□ -1.59
PCDHB9-202ENST00000623266 LINC00483Q53H64 154 aa5.11□□□□□ -1.59
PCDHB9-202ENST00000623266 LOC107984156A0A0G2JMH3 177 aa5.1□□□□□ -1.59
PCDHB9-202ENST00000623266 NCR3O14931 201 aa5.1□□□□□ -1.59
PCDHB9-202ENST00000623266 SPINK1P00995 79 aa5.1□□□□□ -1.59
PCDHB9-202ENST00000623266 ARL17AQ8IVW1 177 aa5.1□□□□□ -1.59
PCDHB9-202ENST00000623266 FAM19A2Q8N3H0 131 aa5.1□□□□□ -1.59
PCDHB9-202ENST00000623266 CHCHD1Q96BP2 118 aaKnown RBP5.1□□□□□ -1.59
PCDHB9-202ENST00000623266 ATP6V1G1O75348 118 aa5.09□□□□□ -1.59
PCDHB9-202ENST00000623266 APOC3P02656 99 aa5.09□□□□□ -1.59
PCDHB9-202ENST00000623266 MEIG1Q5JSS6 88 aa5.09□□□□□ -1.59
PCDHB9-202ENST00000623266 GAGE2AQ6NT46 116 aa5.09□□□□□ -1.59
PCDHB9-202ENST00000623266 SSBP3-AS1Q7Z2R9 100 aa5.09□□□□□ -1.59
PCDHB9-202ENST00000623266 Q9BRP9 147 aa5.09□□□□□ -1.59
PCDHB9-202ENST00000623266 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
PCDHB9-202ENST00000623266 NDUFA12Q9UI09 145 aa5.09□□□□□ -1.59
PCDHB9-202ENST00000623266 ZNF706Q9Y5V0 76 aaPredicted RBP5.09□□□□□ -1.59
PCDHB9-202ENST00000623266 ETDCA0A1B0GVM5 59 aa5.08□□□□□ -1.6
PCDHB9-202ENST00000623266 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
PCDHB9-202ENST00000623266 HERV-K104P63124 156 aa5.08□□□□□ -1.6
PCDHB9-202ENST00000623266 Q8N377 158 aa5.08□□□□□ -1.6
PCDHB9-202ENST00000623266 EIF4EBP3O60516 100 aaPredicted RBP5.07□□□□□ -1.6
PCDHB9-202ENST00000623266 IGLV9-49A0A0B4J1Y8 123 aa5.06□□□□□ -1.6
PCDHB9-202ENST00000623266 MYMXA0A1B0GTQ4 84 aa5.06□□□□□ -1.6
PCDHB9-202ENST00000623266 LINC00587B1AMM8 73 aa5.06□□□□□ -1.6
PCDHB9-202ENST00000623266 SNAPINO95295 136 aa5.06□□□□□ -1.6
PCDHB9-202ENST00000623266 LINC00310P59036 64 aa5.06□□□□□ -1.6
PCDHB9-202ENST00000623266 TRBV10-2A0A0K0K1G8 114 aa5.05□□□□□ -1.6
PCDHB9-202ENST00000623266 LEPROTO15243 131 aa5.05□□□□□ -1.6
PCDHB9-202ENST00000623266 DDTP30046 118 aa5.05□□□□□ -1.6
PCDHB9-202ENST00000623266 MOBPQ13875 183 aa5.05□□□□□ -1.6
PCDHB9-202ENST00000623266 XP32Q5T750 250 aa5.05□□□□□ -1.6
PCDHB9-202ENST00000623266 SVBPQ8N300 66 aa5.05□□□□□ -1.6
PCDHB9-202ENST00000623266 HSBP1O75506 76 aa5.04□□□□□ -1.6
PCDHB9-202ENST00000623266 IGLV6-57P01721 117 aa5.04□□□□□ -1.6
PCDHB9-202ENST00000623266 RPS29P62273 56 aaKnown RBP5.04□□□□□ -1.6
PCDHB9-202ENST00000623266 ADAMTSL4-AS1Q5T5F5 129 aa5.04□□□□□ -1.6
PCDHB9-202ENST00000623266 SOSTDC1Q6X4U4 206 aa5.04□□□□□ -1.6
PCDHB9-202ENST00000623266 MAP1LC3CQ9BXW4 147 aa5.04□□□□□ -1.6
PCDHB9-202ENST00000623266 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
PCDHB9-202ENST00000623266 H0Y8G0 127 aa5.03□□□□□ -1.6
PCDHB9-202ENST00000623266 J3QQQ9 107 aa5.03□□□□□ -1.6
PCDHB9-202ENST00000623266 LEPROTL1O95214 131 aa5.03□□□□□ -1.6
PCDHB9-202ENST00000623266 TRGC2P03986 189 aa5.03□□□□□ -1.6
PCDHB9-202ENST00000623266 LINC01547P58512 204 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms