RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 TM2D3Q9BRN9 247 aa4.5□□□□□ -1.69
ERCC6-209ENST00000623073 IGKV2-28A0A075B6P5 120 aa4.49□□□□□ -1.69
ERCC6-209ENST00000623073 IGKV2D-28P01615 120 aa4.49□□□□□ -1.69
ERCC6-209ENST00000623073 LOC100131303A0A0U1RQF7 123 aa4.49□□□□□ -1.69
ERCC6-209ENST00000623073 FHL3Q13643 280 aa4.49□□□□□ -1.69
ERCC6-209ENST00000623073 WDR87Q6ZQQ6 2873 aa4.49□□□□□ -1.69
ERCC6-209ENST00000623073 DEFB1P60022 68 aa4.49□□□□□ -1.69
ERCC6-209ENST00000623073 Q6ZRX8 168 aa4.49□□□□□ -1.69
ERCC6-209ENST00000623073 DEFB131BA0A096LNP1 70 aa4.48□□□□□ -1.69
ERCC6-209ENST00000623073 IGLV1-51P01701 117 aa4.48□□□□□ -1.69
ERCC6-209ENST00000623073 ODF3L2Q3SX64 289 aa4.48□□□□□ -1.69
ERCC6-209ENST00000623073 COX6A2Q02221 97 aa4.48□□□□□ -1.69
ERCC6-209ENST00000623073 LYPD5Q6UWN5 251 aa4.48□□□□□ -1.69
ERCC6-209ENST00000623073 Q6ZRP5 223 aa4.48□□□□□ -1.69
ERCC6-209ENST00000623073 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.48□□□□□ -1.69
ERCC6-209ENST00000623073 A8MWP4 228 aa4.47□□□□□ -1.69
ERCC6-209ENST00000623073 FAM218AQ96MZ4 157 aa4.47□□□□□ -1.69
ERCC6-209ENST00000623073 BBC3Q96PG8 261 aaPredicted RBP4.47□□□□□ -1.69
ERCC6-209ENST00000623073 SMCR5Q8TEV8 140 aa4.46□□□□□ -1.69
ERCC6-209ENST00000623073 LRCOL1A6NCL2 159 aa4.46□□□□□ -1.7
ERCC6-209ENST00000623073 MDFIQ99750 246 aa4.46□□□□□ -1.7
ERCC6-209ENST00000623073 IGLV4-60A0A075B6I1 120 aa4.46□□□□□ -1.7
ERCC6-209ENST00000623073 A8MTW9 85 aa4.46□□□□□ -1.7
ERCC6-209ENST00000623073 IGKV2-24A0A0C4DH68 120 aa4.46□□□□□ -1.7
ERCC6-209ENST00000623073 OXLD1Q5BKU9 147 aa4.46□□□□□ -1.7
ERCC6-209ENST00000623073 ANKRD17O75179 2603 aaKnown RBP4.46□□□□□ -1.7
ERCC6-209ENST00000623073 PROK1P58294 105 aa4.46□□□□□ -1.7
ERCC6-209ENST00000623073 FASNP49327 2511 aaKnown RBP4.46□□□□□ -1.7
ERCC6-209ENST00000623073 Q75L30 129 aa4.45□□□□□ -1.7
ERCC6-209ENST00000623073 COA5Q86WW8 74 aa4.45□□□□□ -1.7
ERCC6-209ENST00000623073 Q8NA96 180 aa4.45□□□□□ -1.7
ERCC6-209ENST00000623073 LINC01006Q8NI28 216 aa4.45□□□□□ -1.7
ERCC6-209ENST00000623073 A0A087X002 238 aa4.44□□□□□ -1.7
ERCC6-209ENST00000623073 A8MUN3 132 aa4.44□□□□□ -1.7
ERCC6-209ENST00000623073 COL4A2P08572 1712 aa4.44□□□□□ -1.7
ERCC6-209ENST00000623073 KCNQ1DNQ9H478 68 aa4.44□□□□□ -1.7
ERCC6-209ENST00000623073 LINC01556Q5JQF7 62 aa4.44□□□□□ -1.7
ERCC6-209ENST00000623073 IGHV6-1A0A0B4J1U7 121 aa4.44□□□□□ -1.7
ERCC6-209ENST00000623073 C19orf84I3L1E1 186 aa4.43□□□□□ -1.7
ERCC6-209ENST00000623073 LINC00528Q8N1L1 170 aa4.42□□□□□ -1.7
ERCC6-209ENST00000623073 PCOTHQ58A44 107 aa4.42□□□□□ -1.7
ERCC6-209ENST00000623073 EPG5Q9HCE0 2579 aa4.41□□□□□ -1.7
ERCC6-209ENST00000623073 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
ERCC6-209ENST00000623073 KIAA0087Q14695 138 aa4.41□□□□□ -1.7
ERCC6-209ENST00000623073 LINC01554Q52M75 96 aa4.41□□□□□ -1.7
ERCC6-209ENST00000623073 C16orf95Q9H693 158 aa4.41□□□□□ -1.7
ERCC6-209ENST00000623073 GRNP28799 593 aaKnown RBP4.41□□□□□ -1.7
ERCC6-209ENST00000623073 PLA2G2DQ9UNK4 145 aa4.41□□□□□ -1.7
ERCC6-209ENST00000623073 OCR1Q9BZK8 76 aa4.4□□□□□ -1.7
ERCC6-209ENST00000623073 PLA2G5P39877 138 aa4.4□□□□□ -1.71
ERCC6-209ENST00000623073 FLG2Q5D862 2391 aaPredicted RBP4.39□□□□□ -1.71
ERCC6-209ENST00000623073 IGLV5-48A0A075B6I7 105 aa4.39□□□□□ -1.71
ERCC6-209ENST00000623073 RBM12B-AS1Q9P1G2 102 aa4.39□□□□□ -1.71
ERCC6-209ENST00000623073 SPINK6Q6UWN8 80 aa4.39□□□□□ -1.71
ERCC6-209ENST00000623073 CRIPTQ9P021 101 aa4.39□□□□□ -1.71
ERCC6-209ENST00000623073 Q5XG85 94 aa4.38□□□□□ -1.71
ERCC6-209ENST00000623073 Q9UF83 564 aa4.38□□□□□ -1.71
ERCC6-209ENST00000623073 LINC00476Q8WZB0 136 aa4.38□□□□□ -1.71
ERCC6-209ENST00000623073 EPM2AB3EWF7 344 aa4.38□□□□□ -1.71
ERCC6-209ENST00000623073 PRR3P79522 188 aaKnown RBP4.38□□□□□ -1.71
ERCC6-209ENST00000623073 PCSK5Q92824 1860 aa4.38□□□□□ -1.71
ERCC6-209ENST00000623073 J3QKU1 62 aa4.38□□□□□ -1.71
ERCC6-209ENST00000623073 PHF5AQ7RTV0 110 aaKnown RBP4.37□□□□□ -1.71
ERCC6-209ENST00000623073 DMAC1Q96GE9 116 aa4.37□□□□□ -1.71
ERCC6-209ENST00000623073 MRPL34Q9BQ48 92 aaKnown RBP4.37□□□□□ -1.71
ERCC6-209ENST00000623073 A0A096LNI7 61 aa4.37□□□□□ -1.71
ERCC6-209ENST00000623073 EIF4EBP3O60516 100 aaPredicted RBP4.37□□□□□ -1.71
ERCC6-209ENST00000623073 NUPR2A6NF83 97 aa4.37□□□□□ -1.71
ERCC6-209ENST00000623073 CDSNQ15517 529 aa4.37□□□□□ -1.71
ERCC6-209ENST00000623073 A0A1W2PNU3 283 aaPredicted RBP4.37□□□□□ -1.71
ERCC6-209ENST00000623073 C22orf24Q9Y442 160 aa4.36□□□□□ -1.71
ERCC6-209ENST00000623073 TLX1NBP0CAT3 122 aa4.36□□□□□ -1.71
ERCC6-209ENST00000623073 Q6ZSN1 163 aa4.35□□□□□ -1.71
ERCC6-209ENST00000623073 LINC01558Q9Y6Z2 57 aa4.35□□□□□ -1.71
ERCC6-209ENST00000623073 USP24Q9UPU5 2620 aa4.35□□□□□ -1.71
ERCC6-209ENST00000623073 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
ERCC6-209ENST00000623073 IGLV9-49A0A0B4J1Y8 123 aa4.35□□□□□ -1.71
ERCC6-209ENST00000623073 PLA2G2AP14555 144 aa4.35□□□□□ -1.71
ERCC6-209ENST00000623073 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
ERCC6-209ENST00000623073 SPRR4Q96PI1 79 aa4.34□□□□□ -1.71
ERCC6-209ENST00000623073 PRR34Q9NV39 138 aa4.34□□□□□ -1.71
ERCC6-209ENST00000623073 C16orf90A8MZG2 172 aa4.34□□□□□ -1.72
ERCC6-209ENST00000623073 K7EQZ3 153 aa4.33□□□□□ -1.72
ERCC6-209ENST00000623073 DEFB4AO15263 64 aa4.33□□□□□ -1.72
ERCC6-209ENST00000623073 FAM104AQ969W3 186 aa4.33□□□□□ -1.72
ERCC6-209ENST00000623073 C15orf56Q8N910 161 aa4.33□□□□□ -1.72
ERCC6-209ENST00000623073 SSBP3-AS1Q7Z2R9 100 aa4.32□□□□□ -1.72
ERCC6-209ENST00000623073 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
ERCC6-209ENST00000623073 MAPK1IP1LQ8NDC0 245 aa4.31□□□□□ -1.72
ERCC6-209ENST00000623073 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
ERCC6-209ENST00000623073 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
ERCC6-209ENST00000623073 FP248Q71RG6 208 aaPredicted RBP4.31□□□□□ -1.72
ERCC6-209ENST00000623073 C8orf17Q9NRJ1 99 aa4.31□□□□□ -1.72
ERCC6-209ENST00000623073 LINC00612Q8N6U2 182 aa4.3□□□□□ -1.72
ERCC6-209ENST00000623073 LINC00588Q9Y4M8 146 aa4.3□□□□□ -1.72
ERCC6-209ENST00000623073 LINC00313P59037 77 aa4.3□□□□□ -1.72
ERCC6-209ENST00000623073 TNP2Q05952 138 aa4.3□□□□□ -1.72
ERCC6-209ENST00000623073 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
ERCC6-209ENST00000623073 FSHBP01225 129 aa4.29□□□□□ -1.72
ERCC6-209ENST00000623073 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms