RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SERP1Q9Y6X1 66 aa9.66□□□□□ -0.86
LDB3-209ENST00000623056 UNC79Q9P2D8 2635 aa9.65□□□□□ -0.86
LDB3-209ENST00000623056 C6orf223Q8N319 242 aa9.65□□□□□ -0.86
LDB3-209ENST00000623056 HAMPP81172 84 aa9.65□□□□□ -0.87
LDB3-209ENST00000623056 Q6ZVQ6 151 aa9.65□□□□□ -0.87
LDB3-209ENST00000623056 TRAV10A0A0B4J240 114 aa9.64□□□□□ -0.87
LDB3-209ENST00000623056 IGHV4-28A0A0C4DH34 117 aa9.64□□□□□ -0.87
LDB3-209ENST00000623056 KLKP1Q107X0 134 aa9.64□□□□□ -0.87
LDB3-209ENST00000623056 CD164L2Q6UWJ8 174 aa9.64□□□□□ -0.87
LDB3-209ENST00000623056 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
LDB3-209ENST00000623056 ACANP16112 2415 aa9.63□□□□□ -0.87
LDB3-209ENST00000623056 A0A096LPF7 62 aa9.62□□□□□ -0.87
LDB3-209ENST00000623056 CHCHD10Q8WYQ3 142 aaPredicted RBP9.62□□□□□ -0.87
LDB3-209ENST00000623056 SPATA3Q8NHX4 192 aa9.62□□□□□ -0.87
LDB3-209ENST00000623056 SNURFQ9Y675 71 aa9.62□□□□□ -0.87
LDB3-209ENST00000623056 IGLV10-54A0A075B6I4 117 aa9.61□□□□□ -0.87
LDB3-209ENST00000623056 NF1P21359 2839 aa9.61□□□□□ -0.87
LDB3-209ENST00000623056 RMI2Q96E14 147 aa9.61□□□□□ -0.87
LDB3-209ENST00000623056 SETD2Q9BYW2 2564 aaPredicted RBP9.61□□□□□ -0.87
LDB3-209ENST00000623056 IGLV1-51P01701 117 aa9.59□□□□□ -0.87
LDB3-209ENST00000623056 CXCL6P80162 114 aa9.59□□□□□ -0.87
LDB3-209ENST00000623056 Q6ZQY7 126 aa9.59□□□□□ -0.87
LDB3-209ENST00000623056 LINC00612Q8N6U2 182 aa9.59□□□□□ -0.87
LDB3-209ENST00000623056 FN1P02751 2386 aaKnown RBP9.59□□□□□ -0.87
LDB3-209ENST00000623056 DNAJC9-AS1A6NH13 148 aa9.59□□□□□ -0.87
LDB3-209ENST00000623056 C9orf66Q5T8R8 295 aa9.59□□□□□ -0.87
LDB3-209ENST00000623056 Q8N3U1 123 aa9.59□□□□□ -0.87
LDB3-209ENST00000623056 MRAPQ8TCY5 172 aa9.58□□□□□ -0.88
LDB3-209ENST00000623056 F8WEM9 126 aa9.57□□□□□ -0.88
LDB3-209ENST00000623056 IGLV6-57P01721 117 aa9.57□□□□□ -0.88
LDB3-209ENST00000623056 PDE6GP18545 87 aa9.57□□□□□ -0.88
LDB3-209ENST00000623056 KRTAP1-1Q07627 177 aa9.57□□□□□ -0.88
LDB3-209ENST00000623056 C10orf25Q5T742 122 aa9.57□□□□□ -0.88
LDB3-209ENST00000623056 LINC01006Q8NI28 216 aa9.57□□□□□ -0.88
LDB3-209ENST00000623056 ANK3Q12955 4377 aaKnown RBP9.57□□□□□ -0.88
LDB3-209ENST00000623056 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
LDB3-209ENST00000623056 NOTCH2Q04721 2471 aa9.57□□□□□ -0.88
LDB3-209ENST00000623056 ANGP03950 147 aaKnown RBP9.56□□□□□ -0.88
LDB3-209ENST00000623056 REG3AQ06141 175 aa9.56□□□□□ -0.88
LDB3-209ENST00000623056 MUC7Q8TAX7 377 aa9.56□□□□□ -0.88
LDB3-209ENST00000623056 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
LDB3-209ENST00000623056 MTORP42345 2549 aa9.55□□□□□ -0.88
LDB3-209ENST00000623056 LINC00336Q6ZUF6 198 aa9.55□□□□□ -0.88
LDB3-209ENST00000623056 SCXQ7RTU7 201 aa9.55□□□□□ -0.88
LDB3-209ENST00000623056 TM2D3Q9BRN9 247 aa9.55□□□□□ -0.88
LDB3-209ENST00000623056 FP248Q71RG6 208 aaPredicted RBP9.54□□□□□ -0.88
LDB3-209ENST00000623056 ESM1Q9NQ30 184 aa9.54□□□□□ -0.88
LDB3-209ENST00000623056 SMIM26A0A096LP01 95 aa9.53□□□□□ -0.88
LDB3-209ENST00000623056 H3BQ85 93 aa9.53□□□□□ -0.88
LDB3-209ENST00000623056 SPAG11BQ08648 103 aa9.53□□□□□ -0.88
LDB3-209ENST00000623056 C16orf95Q9H693 158 aa9.53□□□□□ -0.88
LDB3-209ENST00000623056 PRO0628Q9UI54 55 aa9.53□□□□□ -0.88
LDB3-209ENST00000623056 TRBV7-4A0A0J9YYF1 115 aa9.53□□□□□ -0.88
LDB3-209ENST00000623056 SMR3AQ99954 134 aa9.53□□□□□ -0.88
LDB3-209ENST00000623056 A0A0J9YWU9 116 aa9.51□□□□□ -0.89
LDB3-209ENST00000623056 NDUFC1O43677 76 aa9.51□□□□□ -0.89
LDB3-209ENST00000623056 IGHV4-30-4P0DP06 118 aa9.51□□□□□ -0.89
LDB3-209ENST00000623056 NBEAL2Q6ZNJ1 2754 aa9.5□□□□□ -0.89
LDB3-209ENST00000623056 DIRC1Q969H9 104 aa9.5□□□□□ -0.89
LDB3-209ENST00000623056 X6R8D5 127 aa9.5□□□□□ -0.89
LDB3-209ENST00000623056 MIFP14174 115 aa9.49□□□□□ -0.89
LDB3-209ENST00000623056 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.49□□□□□ -0.89
LDB3-209ENST00000623056 TRBV7-6A0A0J9YX20 115 aa9.49□□□□□ -0.89
LDB3-209ENST00000623056 NREPQ16612 68 aa9.49□□□□□ -0.89
LDB3-209ENST00000623056 LINC00474Q9P2X8 69 aa9.48□□□□□ -0.89
LDB3-209ENST00000623056 OTOGQ6ZRI0 2925 aa9.47□□□□□ -0.89
LDB3-209ENST00000623056 COX7BP24311 80 aa9.47□□□□□ -0.89
LDB3-209ENST00000623056 ZNF73O43830 326 aaPredicted RBP9.47□□□□□ -0.89
LDB3-209ENST00000623056 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
LDB3-209ENST00000623056 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
LDB3-209ENST00000623056 BPY2O14599 106 aa9.46□□□□□ -0.9
LDB3-209ENST00000623056 TMEM254Q8TBM7 123 aa9.46□□□□□ -0.9
LDB3-209ENST00000623056 ELOF1P60002 83 aaKnown RBP9.45□□□□□ -0.9
LDB3-209ENST00000623056 C6orf48Q9UBA6 75 aa9.44□□□□□ -0.9
LDB3-209ENST00000623056 GVQW2A0A096LPI5 108 aaPredicted RBP9.44□□□□□ -0.9
LDB3-209ENST00000623056 DEFB4AO15263 64 aa9.44□□□□□ -0.9
LDB3-209ENST00000623056 LYRM9A8MSI8 78 aa9.43□□□□□ -0.9
LDB3-209ENST00000623056 Q8N9L7 120 aa9.43□□□□□ -0.9
LDB3-209ENST00000623056 ERC2-IT1O76042 136 aa9.43□□□□□ -0.9
LDB3-209ENST00000623056 HIVEP2P31629 2446 aa9.43□□□□□ -0.9
LDB3-209ENST00000623056 C1orf43Q9BWL3 253 aa9.41□□□□□ -0.9
LDB3-209ENST00000623056 KLK12Q9UKR0 248 aa9.41□□□□□ -0.9
LDB3-209ENST00000623056 IGKV4-1P06312 121 aa9.4□□□□□ -0.9
LDB3-209ENST00000623056 PRR34Q9NV39 138 aa9.4□□□□□ -0.9
LDB3-209ENST00000623056 FAM229BQ4G0N7 80 aa9.39□□□□□ -0.91
LDB3-209ENST00000623056 VPREB1P12018 145 aa9.38□□□□□ -0.91
LDB3-209ENST00000623056 DAD1P61803 113 aa9.38□□□□□ -0.91
LDB3-209ENST00000623056 OCR1Q9BZK8 76 aa9.38□□□□□ -0.91
LDB3-209ENST00000623056 A0A0U1RQV1 116 aa9.38□□□□□ -0.91
LDB3-209ENST00000623056 PRYO14603 147 aa9.38□□□□□ -0.91
LDB3-209ENST00000623056 LELP1Q5T871 98 aa9.38□□□□□ -0.91
LDB3-209ENST00000623056 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
LDB3-209ENST00000623056 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
LDB3-209ENST00000623056 PKIGQ9Y2B9 76 aa9.36□□□□□ -0.91
LDB3-209ENST00000623056 CELA1Q9UNI1 258 aa9.36□□□□□ -0.91
LDB3-209ENST00000623056 INAFM1C9JVW0 142 aa9.35□□□□□ -0.91
LDB3-209ENST00000623056 BRK1Q8WUW1 75 aa9.35□□□□□ -0.91
LDB3-209ENST00000623056 M0R378 163 aa9.34□□□□□ -0.91
LDB3-209ENST00000623056 TEP1Q99973 2627 aaKnown RBP9.34□□□□□ -0.91
LDB3-209ENST00000623056 HTN3P15516 51 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms