RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 IGLC3P0DOY3 106 aa5.39□□□□□ -1.55
TARDBP-227ENST00000622057 ZNF22P17026 224 aaPredicted RBP5.39□□□□□ -1.55
TARDBP-227ENST00000622057 COX19Q49B96 90 aa5.39□□□□□ -1.55
TARDBP-227ENST00000622057 CBLN2Q8IUK8 224 aa5.39□□□□□ -1.55
TARDBP-227ENST00000622057 PLEKHB2Q96CS7 222 aa5.39□□□□□ -1.55
TARDBP-227ENST00000622057 MUC17Q685J3 4493 aa5.38□□□□□ -1.55
TARDBP-227ENST00000622057 IGLV5-39A0A0G2JS06 123 aa5.38□□□□□ -1.55
TARDBP-227ENST00000622057 M0R378 163 aa5.38□□□□□ -1.55
TARDBP-227ENST00000622057 COX17Q14061 63 aa5.38□□□□□ -1.55
TARDBP-227ENST00000622057 C3orf22Q8N5N4 141 aa5.38□□□□□ -1.55
TARDBP-227ENST00000622057 A0A0U1RRA0 63 aa5.37□□□□□ -1.55
TARDBP-227ENST00000622057 LINC00614P0C842 121 aa5.37□□□□□ -1.55
TARDBP-227ENST00000622057 TMEM170BQ5T4T1 132 aa5.37□□□□□ -1.55
TARDBP-227ENST00000622057 Q8NDZ9 215 aa5.37□□□□□ -1.55
TARDBP-227ENST00000622057 HIGD2AQ9BW72 106 aa5.37□□□□□ -1.55
TARDBP-227ENST00000622057 SEC11CQ9BY50 192 aa5.37□□□□□ -1.55
TARDBP-227ENST00000622057 A0A096LNJ9 63 aa5.36□□□□□ -1.55
TARDBP-227ENST00000622057 LINC00158P58513 81 aa5.36□□□□□ -1.55
TARDBP-227ENST00000622057 PMCHL1Q16048 86 aa5.36□□□□□ -1.55
TARDBP-227ENST00000622057 TPRXLQ17RH7 258 aa5.36□□□□□ -1.55
TARDBP-227ENST00000622057 BAGE3Q86Y29 109 aa5.36□□□□□ -1.55
TARDBP-227ENST00000622057 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
TARDBP-227ENST00000622057 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
TARDBP-227ENST00000622057 PPDPFQ9H3Y8 114 aa5.36□□□□□ -1.55
TARDBP-227ENST00000622057 RPS10P5Q9NQ39 176 aa5.36□□□□□ -1.55
TARDBP-227ENST00000622057 C11orf86A6NJI1 115 aa5.35□□□□□ -1.55
TARDBP-227ENST00000622057 URB1-AS1Q96HZ7 61 aa5.35□□□□□ -1.55
TARDBP-227ENST00000622057 TRAPPC1Q9Y5R8 145 aa5.35□□□□□ -1.55
TARDBP-227ENST00000622057 KRTAP4-8A0A0G2JLE6 195 aa5.34□□□□□ -1.55
TARDBP-227ENST00000622057 HBDP02042 147 aa5.34□□□□□ -1.55
TARDBP-227ENST00000622057 CTAG1AP78358 180 aa5.34□□□□□ -1.55
TARDBP-227ENST00000622057 SPAG11AQ6PDA7 123 aa5.34□□□□□ -1.55
TARDBP-227ENST00000622057 C18orf32Q8TCD1 76 aa5.34□□□□□ -1.55
TARDBP-227ENST00000622057 ATP6V1G1O75348 118 aa5.33□□□□□ -1.56
TARDBP-227ENST00000622057 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
TARDBP-227ENST00000622057 SPRR4Q96PI1 79 aa5.33□□□□□ -1.56
TARDBP-227ENST00000622057 CHTOPQ9Y3Y2 248 aaKnown RBP5.33□□□□□ -1.56
TARDBP-227ENST00000622057 IFITM2Q01629 132 aa5.32□□□□□ -1.56
TARDBP-227ENST00000622057 RHEBQ15382 184 aa5.32□□□□□ -1.56
TARDBP-227ENST00000622057 COMMD7Q86VX2 200 aa5.32□□□□□ -1.56
TARDBP-227ENST00000622057 LINC00337Q8N6G1 96 aa5.32□□□□□ -1.56
TARDBP-227ENST00000622057 DAND5Q8N907 189 aa5.32□□□□□ -1.56
TARDBP-227ENST00000622057 TMEM223A0PJW6 202 aa5.31□□□□□ -1.56
TARDBP-227ENST00000622057 SMIM13P0DJ93 91 aa5.31□□□□□ -1.56
TARDBP-227ENST00000622057 MEIG1Q5JSS6 88 aa5.31□□□□□ -1.56
TARDBP-227ENST00000622057 C10orf91Q5T1B1 145 aa5.31□□□□□ -1.56
TARDBP-227ENST00000622057 SMCR5Q8TEV8 140 aa5.31□□□□□ -1.56
TARDBP-227ENST00000622057 ZNF706Q9Y5V0 76 aaPredicted RBP5.31□□□□□ -1.56
TARDBP-227ENST00000622057 NCR3O14931 201 aa5.3□□□□□ -1.56
TARDBP-227ENST00000622057 BOD1L2Q8IYS8 172 aa5.3□□□□□ -1.56
TARDBP-227ENST00000622057 Q8NBF4 154 aa5.3□□□□□ -1.56
TARDBP-227ENST00000622057 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
TARDBP-227ENST00000622057 ETDCA0A1B0GVM5 59 aa5.29□□□□□ -1.56
TARDBP-227ENST00000622057 PRYO14603 147 aa5.29□□□□□ -1.56
TARDBP-227ENST00000622057 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
TARDBP-227ENST00000622057 MIR7-3HGQ8N6C7 128 aa5.28□□□□□ -1.56
TARDBP-227ENST00000622057 TRAV12-1A0A0B4J245 112 aa5.27□□□□□ -1.57
TARDBP-227ENST00000622057 SPRR1AP35321 89 aa5.27□□□□□ -1.57
TARDBP-227ENST00000622057 GAGE2AQ6NT46 116 aa5.27□□□□□ -1.57
TARDBP-227ENST00000622057 IFI27L1Q96BM0 104 aa5.27□□□□□ -1.57
TARDBP-227ENST00000622057 KCNQ1DNQ9H478 68 aa5.27□□□□□ -1.57
TARDBP-227ENST00000622057 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
TARDBP-227ENST00000622057 TRBV10-3A0A0K0K1G6 114 aa5.26□□□□□ -1.57
TARDBP-227ENST00000622057 LINC00587B1AMM8 73 aa5.26□□□□□ -1.57
TARDBP-227ENST00000622057 SPINK1P00995 79 aa5.26□□□□□ -1.57
TARDBP-227ENST00000622057 APOC3P02656 99 aa5.26□□□□□ -1.57
TARDBP-227ENST00000622057 HERV-K104P63124 156 aa5.26□□□□□ -1.57
TARDBP-227ENST00000622057 S100A12P80511 92 aa5.26□□□□□ -1.57
TARDBP-227ENST00000622057 KRTAP13-3Q3SY46 172 aa5.26□□□□□ -1.57
TARDBP-227ENST00000622057 KRTAP4-16G5E9R7 235 aaPredicted RBP5.25□□□□□ -1.57
TARDBP-227ENST00000622057 H0Y8G0 127 aa5.25□□□□□ -1.57
TARDBP-227ENST00000622057 CHCHD1Q96BP2 118 aaKnown RBP5.25□□□□□ -1.57
TARDBP-227ENST00000622057 MAP1LC3CQ9BXW4 147 aa5.25□□□□□ -1.57
TARDBP-227ENST00000622057 NDUFA12Q9UI09 145 aa5.25□□□□□ -1.57
TARDBP-227ENST00000622057 MYMXA0A1B0GTQ4 84 aa5.24□□□□□ -1.57
TARDBP-227ENST00000622057 ERC2-IT1O76042 136 aa5.24□□□□□ -1.57
TARDBP-227ENST00000622057 LINC01547P58512 204 aaPredicted RBP5.24□□□□□ -1.57
TARDBP-227ENST00000622057 MOBPQ13875 183 aa5.24□□□□□ -1.57
TARDBP-227ENST00000622057 ASB16-AS1Q495Z4 193 aa5.24□□□□□ -1.57
TARDBP-227ENST00000622057 FAM19A2Q8N3H0 131 aa5.24□□□□□ -1.57
TARDBP-227ENST00000622057 B5MCH6 92 aa5.23□□□□□ -1.57
TARDBP-227ENST00000622057 DDTP30046 118 aa5.23□□□□□ -1.57
TARDBP-227ENST00000622057 LINC00483Q53H64 154 aa5.23□□□□□ -1.57
TARDBP-227ENST00000622057 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
TARDBP-227ENST00000622057 HSBP1O75506 76 aa5.22□□□□□ -1.57
TARDBP-227ENST00000622057 SNAPINO95295 136 aa5.22□□□□□ -1.57
TARDBP-227ENST00000622057 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
TARDBP-227ENST00000622057 NDUFA5Q16718 116 aa5.22□□□□□ -1.57
TARDBP-227ENST00000622057 SVBPQ8N300 66 aa5.22□□□□□ -1.57
TARDBP-227ENST00000622057 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
TARDBP-227ENST00000622057 LEPROTO15243 131 aa5.21□□□□□ -1.58
TARDBP-227ENST00000622057 Q8N377 158 aa5.21□□□□□ -1.58
TARDBP-227ENST00000622057 SLC25A20O43772 301 aa5.2□□□□□ -1.58
TARDBP-227ENST00000622057 TSPEAR-AS2P59090 65 aa5.2□□□□□ -1.58
TARDBP-227ENST00000622057 S100A7L2Q5SY68 101 aa5.2□□□□□ -1.58
TARDBP-227ENST00000622057 C9orf153Q5TBE3 101 aa5.2□□□□□ -1.58
TARDBP-227ENST00000622057 Q9BRP9 147 aa5.2□□□□□ -1.58
TARDBP-227ENST00000622057 MIEN1Q9BRT3 115 aa5.2□□□□□ -1.58
TARDBP-227ENST00000622057 LOC107984156A0A0G2JMH3 177 aa5.19□□□□□ -1.58
TARDBP-227ENST00000622057 TRBV10-2A0A0K0K1G8 114 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms