RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 MEIG1Q5JSS6 88 aa12.29□□□□□ -0.44
SEMA6C-210ENST00000621728 LINC00476Q8WZB0 136 aa12.29□□□□□ -0.44
SEMA6C-210ENST00000621728 LINC01620Q4KN68 170 aa12.29□□□□□ -0.44
SEMA6C-210ENST00000621728 TTC32Q5I0X7 151 aa12.29□□□□□ -0.44
SEMA6C-210ENST00000621728 RPL13AP40429 203 aaKnown RBP12.27□□□□□ -0.44
SEMA6C-210ENST00000621728 C10orf25Q5T742 122 aa12.27□□□□□ -0.44
SEMA6C-210ENST00000621728 C9JAW5 83 aa12.27□□□□□ -0.45
SEMA6C-210ENST00000621728 DAND5Q8N907 189 aa12.27□□□□□ -0.45
SEMA6C-210ENST00000621728 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
SEMA6C-210ENST00000621728 USP17L23D6RBM5 183 aa12.26□□□□□ -0.45
SEMA6C-210ENST00000621728 UNQ6190/PRO20217Q6UXQ8 127 aa12.26□□□□□ -0.45
SEMA6C-210ENST00000621728 ANKRD29Q8N6D5 301 aa12.25□□□□□ -0.45
SEMA6C-210ENST00000621728 DNAH2Q9P225 4427 aa12.25□□□□□ -0.45
SEMA6C-210ENST00000621728 DNAH6Q9C0G6 4158 aa12.25□□□□□ -0.45
SEMA6C-210ENST00000621728 NPC2P61916 151 aa12.25□□□□□ -0.45
SEMA6C-210ENST00000621728 H3BT86 120 aa12.24□□□□□ -0.45
SEMA6C-210ENST00000621728 C9orf116Q5BN46 136 aaPredicted RBP12.24□□□□□ -0.45
SEMA6C-210ENST00000621728 NTN5Q8WTR8 489 aaPredicted RBP12.24□□□□□ -0.45
SEMA6C-210ENST00000621728 ZNF561-AS1K7EIQ3 104 aa12.23□□□□□ -0.45
SEMA6C-210ENST00000621728 Q6ZR54 194 aa12.23□□□□□ -0.45
SEMA6C-210ENST00000621728 GVQW2A0A096LPI5 108 aaPredicted RBP12.23□□□□□ -0.45
SEMA6C-210ENST00000621728 LST1O00453 97 aa12.23□□□□□ -0.45
SEMA6C-210ENST00000621728 PSCAO43653 123 aa12.23□□□□□ -0.45
SEMA6C-210ENST00000621728 Q6ZRN7 208 aaPredicted RBP12.23□□□□□ -0.45
SEMA6C-210ENST00000621728 PFN2P35080 140 aa12.22□□□□□ -0.45
SEMA6C-210ENST00000621728 CARD19Q96LW7 228 aa12.22□□□□□ -0.45
SEMA6C-210ENST00000621728 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.46
SEMA6C-210ENST00000621728 CXCL5P42830 114 aa12.21□□□□□ -0.46
SEMA6C-210ENST00000621728 SOSTDC1Q6X4U4 206 aa12.21□□□□□ -0.46
SEMA6C-210ENST00000621728 HYDINQ4G0P3 5121 aa12.21□□□□□ -0.46
SEMA6C-210ENST00000621728 CAMK2N2Q96S95 79 aa12.2□□□□□ -0.46
SEMA6C-210ENST00000621728 Q6ZRU5 148 aa12.19□□□□□ -0.46
SEMA6C-210ENST00000621728 C6orf48Q9UBA6 75 aa12.19□□□□□ -0.46
SEMA6C-210ENST00000621728 SLPIP03973 132 aa12.19□□□□□ -0.46
SEMA6C-210ENST00000621728 LINC00158P58513 81 aa12.19□□□□□ -0.46
SEMA6C-210ENST00000621728 MIR7-3HGQ8N6C7 128 aa12.17□□□□□ -0.46
SEMA6C-210ENST00000621728 C2orf48Q96LS8 159 aa12.16□□□□□ -0.46
SEMA6C-210ENST00000621728 LRCOL1A6NCL2 159 aa12.15□□□□□ -0.46
SEMA6C-210ENST00000621728 SYCNQ0VAF6 134 aa12.14□□□□□ -0.47
SEMA6C-210ENST00000621728 CDIP1Q9H305 208 aa12.14□□□□□ -0.47
SEMA6C-210ENST00000621728 SACSQ9NZJ4 4579 aa12.14□□□□□ -0.47
SEMA6C-210ENST00000621728 TRACP01848 142 aa12.13□□□□□ -0.47
SEMA6C-210ENST00000621728 RPL28P46779 137 aaKnown RBP12.13□□□□□ -0.47
SEMA6C-210ENST00000621728 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
SEMA6C-210ENST00000621728 SND1-IT1Q9HBX3 110 aa12.13□□□□□ -0.47
SEMA6C-210ENST00000621728 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.11□□□□□ -0.47
SEMA6C-210ENST00000621728 C1orf134Q5TEV5 83 aa12.11□□□□□ -0.47
SEMA6C-210ENST00000621728 FRAS1Q86XX4 4008 aa12.11□□□□□ -0.47
SEMA6C-210ENST00000621728 COX17Q14061 63 aa12.09□□□□□ -0.47
SEMA6C-210ENST00000621728 DNAH17Q9UFH2 4485 aa12.09□□□□□ -0.47
SEMA6C-210ENST00000621728 F8WDY8 70 aa12.07□□□□□ -0.48
SEMA6C-210ENST00000621728 IGKV2-28A0A075B6P5 120 aa12.06□□□□□ -0.48
SEMA6C-210ENST00000621728 H0YGX0 51 aa12.06□□□□□ -0.48
SEMA6C-210ENST00000621728 IGKV2D-28P01615 120 aa12.06□□□□□ -0.48
SEMA6C-210ENST00000621728 A0A087WTM6 91 aa12.05□□□□□ -0.48
SEMA6C-210ENST00000621728 FAM240AA0A1B0GVK7 77 aa12.05□□□□□ -0.48
SEMA6C-210ENST00000621728 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.48
SEMA6C-210ENST00000621728 XAGE1AQ9HD64 81 aa12.05□□□□□ -0.48
SEMA6C-210ENST00000621728 Q6ZRP5 223 aa12.05□□□□□ -0.48
SEMA6C-210ENST00000621728 LINC00337Q8N6G1 96 aa12.05□□□□□ -0.48
SEMA6C-210ENST00000621728 LCE6AA0A183 80 aa12.04□□□□□ -0.48
SEMA6C-210ENST00000621728 TEX49A0A1B0GTD5 131 aa12.04□□□□□ -0.48
SEMA6C-210ENST00000621728 C14orf177Q52M58 125 aa12.04□□□□□ -0.48
SEMA6C-210ENST00000621728 Q8NDZ9 215 aa12.04□□□□□ -0.48
SEMA6C-210ENST00000621728 NDUFC2-KCTD14E9PQ53 114 aa12.03□□□□□ -0.48
SEMA6C-210ENST00000621728 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
SEMA6C-210ENST00000621728 Q8N814 137 aa12.03□□□□□ -0.48
SEMA6C-210ENST00000621728 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
SEMA6C-210ENST00000621728 HECTD4Q9Y4D8 3996 aa12.03□□□□□ -0.48
SEMA6C-210ENST00000621728 RTL8CO15255 209 aa12.03□□□□□ -0.48
SEMA6C-210ENST00000621728 NDUFC2O95298 119 aa12.02□□□□□ -0.49
SEMA6C-210ENST00000621728 CNBPP62633 177 aaKnown RBP12.02□□□□□ -0.49
SEMA6C-210ENST00000621728 RPL18AQ02543 176 aaKnown RBP12.02□□□□□ -0.49
SEMA6C-210ENST00000621728 TNP2Q05952 138 aa12.01□□□□□ -0.49
SEMA6C-210ENST00000621728 XGP55808 180 aa12.01□□□□□ -0.49
SEMA6C-210ENST00000621728 PRR3P79522 188 aaKnown RBP12.01□□□□□ -0.49
SEMA6C-210ENST00000621728 ACYP1P07311 99 aa11.99□□□□□ -0.49
SEMA6C-210ENST00000621728 SMIM11BQ8TCY0 68 aa11.99□□□□□ -0.49
SEMA6C-210ENST00000621728 KMT2CQ8NEZ4 4911 aaKnown RBP11.98□□□□□ -0.49
SEMA6C-210ENST00000621728 MT-ATP8P03928 68 aa11.98□□□□□ -0.49
SEMA6C-210ENST00000621728 BAALC-AS2P0C853 105 aa11.98□□□□□ -0.49
SEMA6C-210ENST00000621728 TLX1NBP0CAT3 122 aa11.98□□□□□ -0.49
SEMA6C-210ENST00000621728 C9orf129Q5T035 196 aaKnown RBP11.98□□□□□ -0.49
SEMA6C-210ENST00000621728 SS18L2Q9UHA2 77 aa11.98□□□□□ -0.49
SEMA6C-210ENST00000621728 DNAH11Q96DT5 4516 aa11.97□□□□□ -0.49
SEMA6C-210ENST00000621728 FAT2Q9NYQ8 4349 aa11.97□□□□□ -0.49
SEMA6C-210ENST00000621728 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
SEMA6C-210ENST00000621728 ANAPC13Q9BS18 74 aa11.97□□□□□ -0.49
SEMA6C-210ENST00000621728 A0A1B0GX51 115 aa11.96□□□□□ -0.5
SEMA6C-210ENST00000621728 LOC107984640A0A0U1RRK4 108 aa11.95□□□□□ -0.5
SEMA6C-210ENST00000621728 NCR3O14931 201 aa11.95□□□□□ -0.5
SEMA6C-210ENST00000621728 DNAL4O96015 105 aa11.95□□□□□ -0.5
SEMA6C-210ENST00000621728 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
SEMA6C-210ENST00000621728 FAM218AQ96MZ4 157 aa11.95□□□□□ -0.5
SEMA6C-210ENST00000621728 RYR2Q92736 4967 aa11.95□□□□□ -0.5
SEMA6C-210ENST00000621728 A0A096LNI7 61 aa11.94□□□□□ -0.5
SEMA6C-210ENST00000621728 SNCGO76070 127 aa11.94□□□□□ -0.5
SEMA6C-210ENST00000621728 Q6Q795 121 aa11.94□□□□□ -0.5
SEMA6C-210ENST00000621728 C9orf163Q8N9P6 203 aa11.94□□□□□ -0.5
SEMA6C-210ENST00000621728 OR13C6PQ8NH95 151 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms