RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 C1orf64Q8NEQ6 169 aa7.74□□□□□ -1.17
CLIP1-219ENST00000620786 Q9UF83 564 aa7.74□□□□□ -1.17
CLIP1-219ENST00000620786 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
CLIP1-219ENST00000620786 SPATA3Q8NHX4 192 aa7.74□□□□□ -1.17
CLIP1-219ENST00000620786 LINC00846Q9NV44 126 aa7.74□□□□□ -1.17
CLIP1-219ENST00000620786 GVQW2A0A096LPI5 108 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-219ENST00000620786 SOSTDC1Q6X4U4 206 aa7.73□□□□□ -1.17
CLIP1-219ENST00000620786 MYO18BQ8IUG5 2567 aa7.73□□□□□ -1.17
CLIP1-219ENST00000620786 Q6ZRX8 168 aa7.72□□□□□ -1.17
CLIP1-219ENST00000620786 SMIM29Q86T20 159 aa7.72□□□□□ -1.17
CLIP1-219ENST00000620786 BCE1O60756 84 aa7.72□□□□□ -1.17
CLIP1-219ENST00000620786 DNAH10OSP0CZ25 163 aa7.72□□□□□ -1.17
CLIP1-219ENST00000620786 CXCL6P80162 114 aa7.72□□□□□ -1.17
CLIP1-219ENST00000620786 LRRK2Q5S007 2527 aa7.71□□□□□ -1.18
CLIP1-219ENST00000620786 IGLV5-45A0A087WSX0 123 aa7.71□□□□□ -1.18
CLIP1-219ENST00000620786 LINC00313P59037 77 aa7.71□□□□□ -1.18
CLIP1-219ENST00000620786 SMIM26A0A096LP01 95 aa7.71□□□□□ -1.18
CLIP1-219ENST00000620786 LINC00476Q8WZB0 136 aa7.7□□□□□ -1.18
CLIP1-219ENST00000620786 PCSK5Q92824 1860 aa7.7□□□□□ -1.18
CLIP1-219ENST00000620786 ST20-AS1Q8NBB2 130 aa7.7□□□□□ -1.18
CLIP1-219ENST00000620786 TMEM254Q8TBM7 123 aa7.69□□□□□ -1.18
CLIP1-219ENST00000620786 TLN1Q9Y490 2541 aaKnown RBP7.68□□□□□ -1.18
CLIP1-219ENST00000620786 TP53AIP1Q9HCN2 124 aa7.68□□□□□ -1.18
CLIP1-219ENST00000620786 Q96NJ1 140 aa7.68□□□□□ -1.18
CLIP1-219ENST00000620786 ATP11AUNQ6ZP68 121 aa7.68□□□□□ -1.18
CLIP1-219ENST00000620786 FAM168BA1KXE4 195 aa7.67□□□□□ -1.18
CLIP1-219ENST00000620786 KRTAP10-3P60369 221 aa7.67□□□□□ -1.18
CLIP1-219ENST00000620786 JMJD1CQ15652 2540 aa7.66□□□□□ -1.18
CLIP1-219ENST00000620786 PSPHP1O15172 72 aa7.66□□□□□ -1.18
CLIP1-219ENST00000620786 C19orf73Q9NVV2 129 aa7.65□□□□□ -1.18
CLIP1-219ENST00000620786 FAM218AQ96MZ4 157 aa7.64□□□□□ -1.19
CLIP1-219ENST00000620786 CSNK1G2-AS1Q8NCQ2 148 aa7.64□□□□□ -1.19
CLIP1-219ENST00000620786 KLK9Q2XQG4 91 aa7.63□□□□□ -1.19
CLIP1-219ENST00000620786 C2CD3Q4AC94 2353 aa7.63□□□□□ -1.19
CLIP1-219ENST00000620786 SRCAPQ6ZRS2 3230 aa7.63□□□□□ -1.19
CLIP1-219ENST00000620786 A0A096LNT2 108 aa7.63□□□□□ -1.19
CLIP1-219ENST00000620786 ACYP2P14621 99 aa7.63□□□□□ -1.19
CLIP1-219ENST00000620786 COX6B2Q6YFQ2 88 aa7.62□□□□□ -1.19
CLIP1-219ENST00000620786 ABCA12Q86UK0 2595 aa7.62□□□□□ -1.19
CLIP1-219ENST00000620786 A0A1B0GW54 56 aa7.61□□□□□ -1.19
CLIP1-219ENST00000620786 SERTAD4-AS1Q5TG53 156 aa7.61□□□□□ -1.19
CLIP1-219ENST00000620786 A0A1B0GU69 56 aa7.6□□□□□ -1.19
CLIP1-219ENST00000620786 Q6ZQT0 140 aa7.6□□□□□ -1.19
CLIP1-219ENST00000620786 ZNF462Q96JM2 2506 aa7.6□□□□□ -1.19
CLIP1-219ENST00000620786 SMR3BP02814 79 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-219ENST00000620786 GOLGB1Q14789 3259 aaKnown RBP7.59□□□□□ -1.19
CLIP1-219ENST00000620786 VPREB1P12018 145 aa7.59□□□□□ -1.19
CLIP1-219ENST00000620786 PMAIP1Q13794 54 aa7.59□□□□□ -1.19
CLIP1-219ENST00000620786 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
CLIP1-219ENST00000620786 MYO9AB2RTY4 2548 aa7.57□□□□□ -1.2
CLIP1-219ENST00000620786 IGLV1-50A0A075B6I6 118 aa7.57□□□□□ -1.2
CLIP1-219ENST00000620786 A0A087WTM6 91 aa7.57□□□□□ -1.2
CLIP1-219ENST00000620786 LOC110117498A0A087WWA1 95 aa7.57□□□□□ -1.2
CLIP1-219ENST00000620786 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
CLIP1-219ENST00000620786 TM2D3Q9BRN9 247 aa7.57□□□□□ -1.2
CLIP1-219ENST00000620786 ZFYVE26Q68DK2 2539 aa7.56□□□□□ -1.2
CLIP1-219ENST00000620786 ANKRD11Q6UB99 2663 aaPredicted RBP7.56□□□□□ -1.2
CLIP1-219ENST00000620786 C8orf87E5RJ46 101 aa7.56□□□□□ -1.2
CLIP1-219ENST00000620786 LINC00336Q6ZUF6 198 aa7.56□□□□□ -1.2
CLIP1-219ENST00000620786 IGLV6-57P01721 117 aa7.55□□□□□ -1.2
CLIP1-219ENST00000620786 FN1P02751 2386 aaKnown RBP7.54□□□□□ -1.2
CLIP1-219ENST00000620786 DOPEY1Q5JWR5 2465 aa7.54□□□□□ -1.2
CLIP1-219ENST00000620786 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
CLIP1-219ENST00000620786 C15orf56Q8N910 161 aa7.54□□□□□ -1.2
CLIP1-219ENST00000620786 TRAV22A0A0B4J277 110 aa7.53□□□□□ -1.2
CLIP1-219ENST00000620786 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
CLIP1-219ENST00000620786 TRBV7-4A0A0J9YYF1 115 aa7.53□□□□□ -1.2
CLIP1-219ENST00000620786 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
CLIP1-219ENST00000620786 WDR87Q6ZQQ6 2873 aa7.52□□□□□ -1.21
CLIP1-219ENST00000620786 ZNF861PO60384 105 aa7.52□□□□□ -1.21
CLIP1-219ENST00000620786 A8MWP4 228 aa7.51□□□□□ -1.21
CLIP1-219ENST00000620786 H3BPC8 53 aa7.51□□□□□ -1.21
CLIP1-219ENST00000620786 SPAG11AQ6PDA7 123 aa7.51□□□□□ -1.21
CLIP1-219ENST00000620786 KCNQ1DNQ9H478 68 aa7.51□□□□□ -1.21
CLIP1-219ENST00000620786 APLNQ9ULZ1 77 aa7.51□□□□□ -1.21
CLIP1-219ENST00000620786 DSCR10P59022 87 aa7.51□□□□□ -1.21
CLIP1-219ENST00000620786 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-219ENST00000620786 MRPL34Q9BQ48 92 aaKnown RBP7.5□□□□□ -1.21
CLIP1-219ENST00000620786 PRR34Q9NV39 138 aa7.5□□□□□ -1.21
CLIP1-219ENST00000620786 CEP295Q9C0D2 2601 aa7.49□□□□□ -1.21
CLIP1-219ENST00000620786 SMCPP49901 116 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-219ENST00000620786 LITAFQ99732 161 aa7.48□□□□□ -1.21
CLIP1-219ENST00000620786 LOC101927531A0A1B0GV80 90 aa7.48□□□□□ -1.21
CLIP1-219ENST00000620786 C9orf129Q5T035 196 aaKnown RBP7.48□□□□□ -1.21
CLIP1-219ENST00000620786 OBSCN-AS1Q96MR7 158 aa7.48□□□□□ -1.21
CLIP1-219ENST00000620786 TLN2Q9Y4G6 2542 aa7.48□□□□□ -1.21
CLIP1-219ENST00000620786 IGLV8-61A0A075B6I0 122 aa7.48□□□□□ -1.21
CLIP1-219ENST00000620786 USP9XQ93008 2570 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-219ENST00000620786 KRTAP1-1Q07627 177 aa7.47□□□□□ -1.21
CLIP1-219ENST00000620786 ANKRD17O75179 2603 aaKnown RBP7.47□□□□□ -1.21
CLIP1-219ENST00000620786 IGFL1Q6UW32 110 aa7.46□□□□□ -1.21
CLIP1-219ENST00000620786 C9orf163Q8N9P6 203 aa7.46□□□□□ -1.21
CLIP1-219ENST00000620786 SSBP3-AS1Q7Z2R9 100 aa7.46□□□□□ -1.22
CLIP1-219ENST00000620786 LINC00612Q8N6U2 182 aa7.46□□□□□ -1.22
CLIP1-219ENST00000620786 K7EQZ3 153 aa7.46□□□□□ -1.22
CLIP1-219ENST00000620786 IGLV7-43P04211 117 aa7.46□□□□□ -1.22
CLIP1-219ENST00000620786 LINC00528Q8N1L1 170 aa7.45□□□□□ -1.22
CLIP1-219ENST00000620786 ANAPC11Q9NYG5 84 aa7.45□□□□□ -1.22
CLIP1-219ENST00000620786 MUC4Q99102 2169 aa7.44□□□□□ -1.22
CLIP1-219ENST00000620786 SPTBN4Q9H254 2564 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms