RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 C2orf82Q6UX34 121 aa10.39□□□□□ -0.75
CD40-207ENST00000620709 A6NDN8 102 aa10.38□□□□□ -0.75
CD40-207ENST00000620709 TMEM238LA0A1B0GVL6 79 aa10.38□□□□□ -0.75
CD40-207ENST00000620709 A6NJY4 79 aa10.38□□□□□ -0.75
CD40-207ENST00000620709 ZNF561-AS1K7EIQ3 104 aa10.38□□□□□ -0.75
CD40-207ENST00000620709 ADAMTSL4-AS1Q5T5F5 129 aa10.38□□□□□ -0.75
CD40-207ENST00000620709 C15orf56Q8N910 161 aa10.38□□□□□ -0.75
CD40-207ENST00000620709 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
CD40-207ENST00000620709 IFITM1P13164 125 aa10.37□□□□□ -0.75
CD40-207ENST00000620709 RPL24P83731 157 aaKnown RBP10.36□□□□□ -0.75
CD40-207ENST00000620709 HIGD2BQ4VC39 106 aa10.36□□□□□ -0.75
CD40-207ENST00000620709 ERG28Q9UKR5 140 aa10.36□□□□□ -0.75
CD40-207ENST00000620709 GVQW2A0A096LPI5 108 aaPredicted RBP10.35□□□□□ -0.75
CD40-207ENST00000620709 A0A0U1RRA0 63 aa10.35□□□□□ -0.75
CD40-207ENST00000620709 LINC00158P58513 81 aa10.35□□□□□ -0.75
CD40-207ENST00000620709 MUSTN1Q8IVN3 82 aa10.35□□□□□ -0.75
CD40-207ENST00000620709 COPS9Q8WXC6 57 aa10.35□□□□□ -0.75
CD40-207ENST00000620709 LINC00526Q96FQ7 95 aa10.35□□□□□ -0.75
CD40-207ENST00000620709 F8WDY8 70 aa10.34□□□□□ -0.75
CD40-207ENST00000620709 DAND5Q8N907 189 aa10.34□□□□□ -0.75
CD40-207ENST00000620709 C2orf48Q96LS8 159 aa10.34□□□□□ -0.75
CD40-207ENST00000620709 KRTAP29-1A8MX34 341 aaPredicted RBP10.33□□□□□ -0.76
CD40-207ENST00000620709 PFN2P35080 140 aa10.33□□□□□ -0.76
CD40-207ENST00000620709 COX17Q14061 63 aa10.33□□□□□ -0.76
CD40-207ENST00000620709 CAMK2N2Q96S95 79 aa10.33□□□□□ -0.76
CD40-207ENST00000620709 NHP2Q9NX24 153 aaKnown RBP10.33□□□□□ -0.76
CD40-207ENST00000620709 LRP1Q07954 4544 aaKnown RBP10.33□□□□□ -0.76
CD40-207ENST00000620709 RPL37AP61513 92 aaKnown RBP10.33□□□□□ -0.76
CD40-207ENST00000620709 UNQ6190/PRO20217Q6UXQ8 127 aa10.33□□□□□ -0.76
CD40-207ENST00000620709 MIR7-3HGQ8N6C7 128 aa10.33□□□□□ -0.76
CD40-207ENST00000620709 C9orf163Q8N9P6 203 aa10.33□□□□□ -0.76
CD40-207ENST00000620709 PKHD1L1Q86WI1 4243 aa10.32□□□□□ -0.76
CD40-207ENST00000620709 NPC2P61916 151 aa10.32□□□□□ -0.76
CD40-207ENST00000620709 C10orf25Q5T742 122 aa10.32□□□□□ -0.76
CD40-207ENST00000620709 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
CD40-207ENST00000620709 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
CD40-207ENST00000620709 PPDPFQ9H3Y8 114 aa10.32□□□□□ -0.76
CD40-207ENST00000620709 FAT3Q8TDW7 4589 aa10.32□□□□□ -0.76
CD40-207ENST00000620709 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
CD40-207ENST00000620709 A4D1N5 150 aa10.31□□□□□ -0.76
CD40-207ENST00000620709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.31□□□□□ -0.76
CD40-207ENST00000620709 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.3□□□□□ -0.76
CD40-207ENST00000620709 A0A1B0GWB2 263 aa10.3□□□□□ -0.76
CD40-207ENST00000620709 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
CD40-207ENST00000620709 C6orf48Q9UBA6 75 aa10.29□□□□□ -0.76
CD40-207ENST00000620709 PANO1I0J062 215 aa10.28□□□□□ -0.76
CD40-207ENST00000620709 K7ERJ3 54 aa10.28□□□□□ -0.76
CD40-207ENST00000620709 C9orf116Q5BN46 136 aaPredicted RBP10.28□□□□□ -0.76
CD40-207ENST00000620709 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
CD40-207ENST00000620709 Q6ZRU5 148 aa10.28□□□□□ -0.76
CD40-207ENST00000620709 TAX1BP3O14907 124 aa10.28□□□□□ -0.76
CD40-207ENST00000620709 SYCNQ0VAF6 134 aa10.28□□□□□ -0.76
CD40-207ENST00000620709 SDIM1Q6ZPB5 146 aa10.28□□□□□ -0.76
CD40-207ENST00000620709 A0A0B4J2C4 111 aa10.27□□□□□ -0.77
CD40-207ENST00000620709 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
CD40-207ENST00000620709 CFC1BP0CG36 223 aa10.27□□□□□ -0.77
CD40-207ENST00000620709 CFC1P0CG37 223 aa10.27□□□□□ -0.77
CD40-207ENST00000620709 CNBPP62633 177 aaKnown RBP10.26□□□□□ -0.77
CD40-207ENST00000620709 RAB37Q96AX2 223 aa10.26□□□□□ -0.77
CD40-207ENST00000620709 CARD19Q96LW7 228 aa10.25□□□□□ -0.77
CD40-207ENST00000620709 OXTP01178 125 aa10.24□□□□□ -0.77
CD40-207ENST00000620709 CHTF8P0CG12 524 aa10.24□□□□□ -0.77
CD40-207ENST00000620709 SLPIP03973 132 aa10.23□□□□□ -0.77
CD40-207ENST00000620709 RNF151Q2KHN1 245 aa10.23□□□□□ -0.77
CD40-207ENST00000620709 SND1-IT1Q9HBX3 110 aa10.23□□□□□ -0.77
CD40-207ENST00000620709 LOC107984156A0A0G2JMH3 177 aa10.23□□□□□ -0.77
CD40-207ENST00000620709 C9orf118A6NHY6 69 aa10.23□□□□□ -0.77
CD40-207ENST00000620709 ARL17AQ8IVW1 177 aa10.23□□□□□ -0.77
CD40-207ENST00000620709 PRO1854Q9UHT4 67 aa10.23□□□□□ -0.77
CD40-207ENST00000620709 A0A1B0GV90 55 aa10.21□□□□□ -0.78
CD40-207ENST00000620709 NDUFC2-KCTD14E9PQ53 114 aa10.21□□□□□ -0.78
CD40-207ENST00000620709 A0A087WYN8 130 aa10.2□□□□□ -0.78
CD40-207ENST00000620709 H3BUT2 72 aa10.19□□□□□ -0.78
CD40-207ENST00000620709 NDUFC2O95298 119 aa10.18□□□□□ -0.78
CD40-207ENST00000620709 TLX1NBP0CAT3 122 aa10.18□□□□□ -0.78
CD40-207ENST00000620709 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
CD40-207ENST00000620709 IGKV2-24A0A0C4DH68 120 aa10.17□□□□□ -0.78
CD40-207ENST00000620709 TSPAN13O95857 204 aa10.17□□□□□ -0.78
CD40-207ENST00000620709 SPACA4Q8TDM5 124 aa10.17□□□□□ -0.78
CD40-207ENST00000620709 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
CD40-207ENST00000620709 NAA38Q9BRA0 125 aaKnown RBP10.17□□□□□ -0.78
CD40-207ENST00000620709 HMCN2Q8NDA2 5059 aa10.16□□□□□ -0.78
CD40-207ENST00000620709 RPL13AP40429 203 aaKnown RBP10.16□□□□□ -0.78
CD40-207ENST00000620709 Q1RN00 199 aa10.16□□□□□ -0.78
CD40-207ENST00000620709 IGKV2-28A0A075B6P5 120 aa10.15□□□□□ -0.78
CD40-207ENST00000620709 IGKV2D-28P01615 120 aa10.15□□□□□ -0.78
CD40-207ENST00000620709 RPL18AQ02543 176 aaKnown RBP10.15□□□□□ -0.78
CD40-207ENST00000620709 Q6ZRP5 223 aa10.15□□□□□ -0.78
CD40-207ENST00000620709 XAGE1AQ9HD64 81 aa10.15□□□□□ -0.78
CD40-207ENST00000620709 A0A1W2PPM0 123 aa10.14□□□□□ -0.79
CD40-207ENST00000620709 H7C2G1 150 aa10.14□□□□□ -0.79
CD40-207ENST00000620709 GAGE2EQ4V326 116 aa10.14□□□□□ -0.79
CD40-207ENST00000620709 C7orf33Q8WU49 177 aa10.14□□□□□ -0.79
CD40-207ENST00000620709 GAGE2DQ9UEU5 116 aa10.14□□□□□ -0.79
CD40-207ENST00000620709 LOC107984640A0A0U1RRK4 108 aa10.13□□□□□ -0.79
CD40-207ENST00000620709 LINC00337Q8N6G1 96 aa10.13□□□□□ -0.79
CD40-207ENST00000620709 PLAC8Q9NZF1 115 aa10.13□□□□□ -0.79
CD40-207ENST00000620709 FABP2P12104 132 aa10.12□□□□□ -0.79
CD40-207ENST00000620709 VAMP3Q15836 100 aa10.12□□□□□ -0.79
CD40-207ENST00000620709 PLA2G2DQ9UNK4 145 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms