RNA–Protein interactions for RNA: ENST00000620323.1

USP12-203, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 3 BASIC

Gene USP12, Length 349 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-203ENST00000620323 KIF20BQ96Q89 1820 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 I3L3M4 83 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 K7EQZ3 153 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 NDUFB1O75438 58 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 CFDP00746 253 aaPredicted RBP0.37□□□□□ -2.35
USP12-203ENST00000620323 COX8AP10176 69 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 COX6B1P14854 86 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 COX7BP24311 80 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 ATP5EP2Q5VTU8 51 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 SPINK6Q6UWN8 80 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 ALKQ9UM73 1620 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 SLIT1O75093 1534 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 AKAP6Q13023 2319 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 PTPRQQ9UMZ3 2332 aa0.37□□□□□ -2.35
USP12-203ENST00000620323 NCOA2Q15596 1464 aa0.36□□□□□ -2.35
USP12-203ENST00000620323 LRRC9Q6ZRR7 1453 aa0.36□□□□□ -2.35
USP12-203ENST00000620323 GVINP1Q7Z2Y8 2422 aa0.36□□□□□ -2.35
USP12-203ENST00000620323 PTPRZ1P23471 2315 aaPredicted RBP0.36□□□□□ -2.35
USP12-203ENST00000620323 CPSF4LA6NMK7 179 aaKnown RBP0.36□□□□□ -2.35
USP12-203ENST00000620323 UMAD1C9J7I0 102 aa0.36□□□□□ -2.35
USP12-203ENST00000620323 H3BVH4 76 aa0.36□□□□□ -2.35
USP12-203ENST00000620323 PDCD5O14737 125 aa0.36□□□□□ -2.35
USP12-203ENST00000620323 IFI27P40305 119 aaPredicted RBP0.36□□□□□ -2.35
USP12-203ENST00000620323 RPL38P63173 70 aaKnown RBP0.36□□□□□ -2.35
USP12-203ENST00000620323 DEFB121Q5J5C9 76 aa0.36□□□□□ -2.35
USP12-203ENST00000620323 DEFB123Q8N688 67 aa0.36□□□□□ -2.35
USP12-203ENST00000620323 URB2Q14146 1524 aaKnown RBP0.36□□□□□ -2.35
USP12-203ENST00000620323 RGPD2P0DJD1 1756 aa0.36□□□□□ -2.35
USP12-203ENST00000620323 MUC5BQ9HC84 5762 aaPredicted RBP0.36□□□□□ -2.35
USP12-203ENST00000620323 LRRC37AA6NMS7 1700 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 RGPD1P0DJD0 1748 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 LRRIQ1Q96JM4 1722 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 NKTRP30414 1462 aaKnown RBP0.35□□□□□ -2.35
USP12-203ENST00000620323 UBR3Q6ZT12 1888 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 PIK3C2BO00750 1634 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.35□□□□□ -2.359e-6■■□□□ 12.6
USP12-203ENST00000620323 CHD9Q3L8U1 2897 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 IFI6P09912 130 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 KRTAP2-3P0C7H8 128 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 SPRR1BP22528 89 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 NREPQ16612 68 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 KRTAP2-4Q9BYR9 128 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 KRTAP2-1Q9BYU5 128 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 APLNQ9ULZ1 77 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 TNCP24821 2201 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 CFAP74Q9C0B2 1584 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 PKDREJQ9NTG1 2253 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 FMN2Q9NZ56 1722 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 BIVM-ERCC5R4GMW8 1640 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 IGF2RP11717 2491 aa0.35□□□□□ -2.35
USP12-203ENST00000620323 LTN1O94822 1766 aa0.34□□□□□ -2.35
USP12-203ENST00000620323 UGGT2Q9NYU1 1516 aa0.34□□□□□ -2.35
USP12-203ENST00000620323 ABCA8O94911 1581 aa0.34□□□□□ -2.36
USP12-203ENST00000620323 SPRR1AP35321 89 aa0.34□□□□□ -2.36
USP12-203ENST00000620323 DEFB109BQ30KR1 87 aa0.34□□□□□ -2.36
USP12-203ENST00000620323 HEPN1Q6WQI6 88 aa0.34□□□□□ -2.36
USP12-203ENST00000620323 OTOGQ6ZRI0 2925 aa0.34□□□□□ -2.36
USP12-203ENST00000620323 DEFB105AQ8NG35 78 aa0.34□□□□□ -2.36
USP12-203ENST00000620323 MRPL34Q9BQ48 92 aaKnown RBP0.34□□□□□ -2.36
USP12-203ENST00000620323 HILPDAQ9Y5L2 63 aa0.34□□□□□ -2.36
USP12-203ENST00000620323 RGPD8O14715 1765 aaPredicted RBP0.34□□□□□ -2.36
USP12-203ENST00000620323 COL14A1Q05707 1796 aaKnown RBP0.34□□□□□ -2.36
USP12-203ENST00000620323 RGPD5Q99666 1765 aa0.34□□□□□ -2.36
USP12-203ENST00000620323 PTPN23Q9H3S7 1636 aa0.34□□□□□ -2.36
USP12-203ENST00000620323 ZNF831Q5JPB2 1677 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 PPRC1Q5VV67 1664 aaKnown RBP0.33□□□□□ -2.36
USP12-203ENST00000620323 MYO5CQ9NQX4 1742 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 CEP170BQ9Y4F5 1589 aaPredicted RBP0.33□□□□□ -2.36
USP12-203ENST00000620323 SPINK1P00995 79 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 KLK9Q2XQG4 91 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 Q5BKY6 102 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 Q5VSD8 79 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 GNG13Q9P2W3 67 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 IQGAP3Q86VI3 1631 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 USP32Q8NFA0 1604 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 CCDC88BA6NC98 1476 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 TSC2P49815 1807 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 ZFYVE26Q68DK2 2539 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 DUOX2Q9NRD8 1548 aa0.33□□□□□ -2.36
USP12-203ENST00000620323 ZNF292O60281 2723 aa0.32□□□□□ -2.36
USP12-203ENST00000620323 CNOT1A5YKK6 2376 aaKnown RBP0.32□□□□□ -2.36
USP12-203ENST00000620323 CLIP1P30622 1438 aa0.32□□□□□ -2.36
USP12-203ENST00000620323 NDUFA4O00483 81 aa0.32□□□□□ -2.36
USP12-203ENST00000620323 CCL22O00626 93 aa0.32□□□□□ -2.36
USP12-203ENST00000620323 H1FX-AS1Q4G0G2 97 aa0.32□□□□□ -2.36
USP12-203ENST00000620323 QSER1Q2KHR3 1735 aa0.32□□□□□ -2.36
USP12-203ENST00000620323 BCORQ6W2J9 1755 aa0.32□□□□□ -2.36
USP12-203ENST00000620323 SCN11AQ9UI33 1791 aa0.32□□□□□ -2.36
USP12-203ENST00000620323 DNMBPQ6XZF7 1577 aa0.32□□□□□ -2.36
USP12-203ENST00000620323 PIEZO2Q9H5I5 2752 aa0.31□□□□□ -2.36
USP12-203ENST00000620323 MAST4O15021 2626 aa0.31□□□□□ -2.36
USP12-203ENST00000620323 POLR1AO95602 1720 aaPredicted RBP0.31□□□□□ -2.36
USP12-203ENST00000620323 DOT1LQ8TEK3 1739 aa0.31□□□□□ -2.36
USP12-203ENST00000620323 SPTA1P02549 2419 aa0.31□□□□□ -2.36
USP12-203ENST00000620323 ATXN8Q156A1 80 aa0.31□□□□□ -2.36
USP12-203ENST00000620323 MAGI3Q5TCQ9 1506 aa0.31□□□□□ -2.36
USP12-203ENST00000620323 ARFGEF2Q9Y6D5 1785 aa0.31□□□□□ -2.36
USP12-203ENST00000620323 LMTK2Q8IWU2 1503 aa0.3□□□□□ -2.36
USP12-203ENST00000620323 CELSR2Q9HCU4 2923 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms