RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 LINC01551Q86U37 167 aa3.28□□□□□ -1.88
SCAMP1-206ENST00000618166 YPEL4Q96NS1 127 aa3.28□□□□□ -1.88
SCAMP1-206ENST00000618166 RPS10P5Q9NQ39 176 aa3.28□□□□□ -1.88
SCAMP1-206ENST00000618166 MANBALQ9NQG1 85 aa3.28□□□□□ -1.88
SCAMP1-206ENST00000618166 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 TRBV20OR9-2A0A075B6H5 130 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 TGIF2-C20orf24A0A0A6YYL0 155 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 TRBV6-5A0A0K0K1A5 114 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 IFITM10A6NMD0 228 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 COLCA2A8K830 154 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 TMEM250H0YL14 139 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 IFNA1P01562 189 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 CKS1BP61024 79 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 RPL23P62829 140 aaKnown RBP3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 CST9LP1Q5W188 147 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 FAM231DQ6ZW35 169 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 SMCR5Q8TEV8 140 aa3.27□□□□□ -1.89
SCAMP1-206ENST00000618166 TRIAP1O43715 76 aa3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 TAGLN2P37802 199 aaKnown RBP3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 POLR2KP53803 58 aaKnown RBP3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 RPL39P62891 51 aaKnown RBP3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 FAM19A3Q7Z5A8 133 aa3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 BAGE2Q86Y30 109 aa3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 OCC1Q8TAD7 63 aa3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 C11orf52Q96A22 123 aa3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 SMIM7Q9BQ49 75 aa3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 ST20Q9HBF5 79 aa3.26□□□□□ -1.89
SCAMP1-206ENST00000618166 TRBV27A0A0K0K1C4 114 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 K7EN84 100 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 PDE6DO43924 150 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 C9orf153Q5TBE3 101 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 Q8NDZ9 215 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 NAT8Q9UHE5 227 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 FAM236DA0A1B0GTK5 79 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 F2Z2F3 143 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 PRSS2P07478 247 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 FAM236CP0DP71 79 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 FCER1GP30273 86 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 RPL35P42766 123 aaKnown RBP3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 RHEBQ15382 184 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 ADIRFQ15847 76 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 C6orf226Q5I0X4 101 aa3.25□□□□□ -1.89
SCAMP1-206ENST00000618166 TRBV20-1A0A075B6N2 111 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 LOC105371267A0A1B0GV96 52 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 F8VRH5 84 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 ERC2-IT1O76042 136 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 VPREB1P12018 145 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 RAB5BP61020 215 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 HBBP68871 147 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 CENPWQ5EE01 88 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 ATP11AUNQ6ZP68 121 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 TIMM21Q9BVV7 248 aa3.24□□□□□ -1.89
SCAMP1-206ENST00000618166 MT-ND4LP03901 98 aa3.23□□□□□ -1.89
SCAMP1-206ENST00000618166 RAB5AP20339 215 aa3.23□□□□□ -1.89
SCAMP1-206ENST00000618166 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
SCAMP1-206ENST00000618166 Q8IZM0 81 aa3.23□□□□□ -1.89
SCAMP1-206ENST00000618166 ALKBH7Q9BT30 221 aaPredicted RBP3.23□□□□□ -1.89
SCAMP1-206ENST00000618166 V9GYV3 84 aa3.23□□□□□ -1.89
SCAMP1-206ENST00000618166 SMKR1H3BMG3 65 aa3.22□□□□□ -1.89
SCAMP1-206ENST00000618166 CNFNQ9BYD5 112 aa3.22□□□□□ -1.89
SCAMP1-206ENST00000618166 TRBV24-1A0A075B6N3 115 aa3.21□□□□□ -1.9
SCAMP1-206ENST00000618166 H7C2G1 150 aa3.21□□□□□ -1.9
SCAMP1-206ENST00000618166 GNG4P50150 75 aa3.21□□□□□ -1.9
SCAMP1-206ENST00000618166 SMAGPQ0VAQ4 97 aa3.21□□□□□ -1.9
SCAMP1-206ENST00000618166 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SCAMP1-206ENST00000618166 C1orf195Q5TG92 126 aa3.21□□□□□ -1.9
SCAMP1-206ENST00000618166 Q6ZVH6 145 aa3.21□□□□□ -1.9
SCAMP1-206ENST00000618166 OSTCQ9NRP0 149 aa3.21□□□□□ -1.9
SCAMP1-206ENST00000618166 PPP1R2P9O14990 202 aa3.2□□□□□ -1.9
SCAMP1-206ENST00000618166 TRGC2P03986 189 aa3.2□□□□□ -1.9
SCAMP1-206ENST00000618166 MT1BP07438 61 aa3.2□□□□□ -1.9
SCAMP1-206ENST00000618166 ZC2HC1BQ5TFG8 222 aa3.2□□□□□ -1.9
SCAMP1-206ENST00000618166 TCEAL7Q9BRU2 100 aa3.2□□□□□ -1.9
SCAMP1-206ENST00000618166 SMIM27A0A1W2PRY6 76 aa3.19□□□□□ -1.9
SCAMP1-206ENST00000618166 VCYO14598 125 aa3.19□□□□□ -1.9
SCAMP1-206ENST00000618166 S100A9P06702 114 aaKnown RBP3.19□□□□□ -1.9
SCAMP1-206ENST00000618166 MRPS36P82909 103 aaKnown RBP3.19□□□□□ -1.9
SCAMP1-206ENST00000618166 C6orf99Q4VX62 202 aa3.19□□□□□ -1.9
SCAMP1-206ENST00000618166 Q6ZN92 141 aa3.19□□□□□ -1.9
SCAMP1-206ENST00000618166 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 C5orf52A6NGY3 159 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 GATCO43716 136 aaKnown RBP3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST1H2BKO60814 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST1H2BJP06899 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST1H2BOP23527 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST1H2BBP33778 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST1H2BDP58876 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 SNRPEP62304 92 aaKnown RBP3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST1H2BCP62807 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST2H2BEQ16778 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 LINC01561Q8N1V8 128 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST1H2BHQ93079 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST1H2BNQ99877 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 HIST1H2BMQ99879 126 aa3.18□□□□□ -1.9
SCAMP1-206ENST00000618166 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
SCAMP1-206ENST00000618166 S100PP25815 95 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 252.2 ms