RNA–Protein interactions for RNA: ENST00000616956.1

SEM1-216, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-216ENST00000616956 APLNQ9ULZ1 77 aa0.38□□□□□ -2.35
SEM1-216ENST00000616956 PLCE1Q9P212 2302 aa0.38□□□□□ -2.35
SEM1-216ENST00000616956 SCRIBQ14160 1630 aa0.38□□□□□ -2.35
SEM1-216ENST00000616956 MAP3K4Q9Y6R4 1608 aa0.38□□□□□ -2.35
SEM1-216ENST00000616956 POLQO75417 2590 aa0.38□□□□□ -2.35
SEM1-216ENST00000616956 F8P00451 2351 aa0.38□□□□□ -2.35
SEM1-216ENST00000616956 C2CD3Q4AC94 2353 aa0.38□□□□□ -2.35
SEM1-216ENST00000616956 PPLO60437 1756 aa0.37□□□□□ -2.35
SEM1-216ENST00000616956 CCL22O00626 93 aa0.37□□□□□ -2.35
SEM1-216ENST00000616956 RPL38P63173 70 aaKnown RBP0.37□□□□□ -2.35
SEM1-216ENST00000616956 UBR1Q8IWV7 1749 aa0.37□□□□□ -2.35
SEM1-216ENST00000616956 ERVK-7P63135 1459 aa0.36□□□□□ -2.35
SEM1-216ENST00000616956 H3BUT2 72 aa0.36□□□□□ -2.35
SEM1-216ENST00000616956 WFDC9Q8NEX5 89 aa0.36□□□□□ -2.35
SEM1-216ENST00000616956 USP24Q9UPU5 2620 aa0.36□□□□□ -2.35
SEM1-216ENST00000616956 CLIP1P30622 1438 aa0.36□□□□□ -2.35
SEM1-216ENST00000616956 ALKQ9UM73 1620 aa0.35□□□□□ -2.35
SEM1-216ENST00000616956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.35□□□□□ -2.35
SEM1-216ENST00000616956 LRRC7Q96NW7 1537 aa0.35□□□□□ -2.35
SEM1-216ENST00000616956 KLK9Q2XQG4 91 aa0.35□□□□□ -2.35
SEM1-216ENST00000616956 BVES-AS1Q5T3Y7 98 aa0.35□□□□□ -2.35
SEM1-216ENST00000616956 DEFB121Q5J5C9 76 aa0.34□□□□□ -2.36
SEM1-216ENST00000616956 FMN2Q9NZ56 1722 aa0.34□□□□□ -2.36
SEM1-216ENST00000616956 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.36
SEM1-216ENST00000616956 URB2Q14146 1524 aaKnown RBP0.33□□□□□ -2.36
SEM1-216ENST00000616956 SUPT6HQ7KZ85 1726 aaKnown RBP0.33□□□□□ -2.36
SEM1-216ENST00000616956 ANKRD36A6QL64 1941 aa0.33□□□□□ -2.36
SEM1-216ENST00000616956 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
SEM1-216ENST00000616956 H1FX-AS1Q4G0G2 97 aa0.33□□□□□ -2.36
SEM1-216ENST00000616956 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
SEM1-216ENST00000616956 CHD9Q3L8U1 2897 aa0.33□□□□□ -2.36
SEM1-216ENST00000616956 DCAF1Q9Y4B6 1507 aa0.33□□□□□ -2.36
SEM1-216ENST00000616956 PKD1L3Q7Z443 1732 aa0.33□□□□□ -2.36
SEM1-216ENST00000616956 DOPEY2Q9Y3R5 2298 aa0.33□□□□□ -2.36
SEM1-216ENST00000616956 PIEZO1Q92508 2521 aa0.32□□□□□ -2.36
SEM1-216ENST00000616956 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
SEM1-216ENST00000616956 TSC2P49815 1807 aa0.32□□□□□ -2.36
SEM1-216ENST00000616956 KIF20BQ96Q89 1820 aa0.32□□□□□ -2.36
SEM1-216ENST00000616956 A0A087WXM4 84 aa0.32□□□□□ -2.36
SEM1-216ENST00000616956 ATP5EP2Q5VTU8 51 aa0.32□□□□□ -2.36
SEM1-216ENST00000616956 HEPN1Q6WQI6 88 aa0.32□□□□□ -2.36
SEM1-216ENST00000616956 CDKN2A-AS1Q9UH64 79 aa0.32□□□□□ -2.36
SEM1-216ENST00000616956 TMEM131LA2VDJ0 1609 aa0.31□□□□□ -2.36
SEM1-216ENST00000616956 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
SEM1-216ENST00000616956 CSMD3Q7Z407 3707 aa0.31□□□□□ -2.36
SEM1-216ENST00000616956 NCOA2Q15596 1464 aa0.31□□□□□ -2.36
SEM1-216ENST00000616956 UMAD1C9J7I0 102 aa0.31□□□□□ -2.36
SEM1-216ENST00000616956 ABCC1P33527 1531 aa0.31□□□□□ -2.36
SEM1-216ENST00000616956 PTPRQQ9UMZ3 2332 aa0.31□□□□□ -2.36
SEM1-216ENST00000616956 UBR3Q6ZT12 1888 aa0.31□□□□□ -2.36
SEM1-216ENST00000616956 PKDREJQ9NTG1 2253 aa0.3□□□□□ -2.36
SEM1-216ENST00000616956 ANKRD17O75179 2603 aaKnown RBP0.3□□□□□ -2.36
SEM1-216ENST00000616956 IFI27P40305 119 aaPredicted RBP0.3□□□□□ -2.36
SEM1-216ENST00000616956 C18orf32Q8TCD1 76 aa0.3□□□□□ -2.36
SEM1-216ENST00000616956 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
SEM1-216ENST00000616956 URB1O60287 2271 aaKnown RBP0.3□□□□□ -2.36
SEM1-216ENST00000616956 ZNF292O60281 2723 aa0.29□□□□□ -2.36
SEM1-216ENST00000616956 RGPD2P0DJD1 1756 aa0.29□□□□□ -2.36
SEM1-216ENST00000616956 KDM5DQ9BY66 1539 aa0.29□□□□□ -2.36
SEM1-216ENST00000616956 DIP2BQ9P265 1576 aa0.29□□□□□ -2.36
SEM1-216ENST00000616956 PTPRZ1P23471 2315 aaPredicted RBP0.29□□□□□ -2.36
SEM1-216ENST00000616956 IFI6P09912 130 aa0.29□□□□□ -2.36
SEM1-216ENST00000616956 SMIM13P0DJ93 91 aa0.29□□□□□ -2.36
SEM1-216ENST00000616956 COX6B2Q6YFQ2 88 aa0.29□□□□□ -2.36
SEM1-216ENST00000616956 RGPD1P0DJD0 1748 aa0.29□□□□□ -2.36
SEM1-216ENST00000616956 RRBP1Q9P2E9 1410 aaKnown RBP0.29□□□□□ -2.36
SEM1-216ENST00000616956 LOC730098B7Z3J9 87 aa0.28□□□□□ -2.36
SEM1-216ENST00000616956 AKAP6Q13023 2319 aa0.28□□□□□ -2.36
SEM1-216ENST00000616956 ANKARQ7Z5J8 1434 aa0.28□□□□□ -2.37
SEM1-216ENST00000616956 COL14A1Q05707 1796 aaKnown RBP0.27□□□□□ -2.37
SEM1-216ENST00000616956 USP32Q8NFA0 1604 aa0.27□□□□□ -2.37
SEM1-216ENST00000616956 QSER1Q2KHR3 1735 aa0.27□□□□□ -2.37
SEM1-216ENST00000616956 PIEZO2Q9H5I5 2752 aa0.26□□□□□ -2.37
SEM1-216ENST00000616956 HMGA1P17096 107 aaKnown RBP0.26□□□□□ -2.37
SEM1-216ENST00000616956 LELP1Q5T871 98 aa0.26□□□□□ -2.37
SEM1-216ENST00000616956 SPTBN1Q01082 2364 aaKnown RBP0.26□□□□□ -2.37
SEM1-216ENST00000616956 TENM4Q6N022 2769 aa0.26□□□□□ -2.37
SEM1-216ENST00000616956 NREPQ16612 68 aa0.25□□□□□ -2.37
SEM1-216ENST00000616956 WFDC13Q8IUB5 93 aa0.25□□□□□ -2.37
SEM1-216ENST00000616956 ZFYVE26Q68DK2 2539 aa0.25□□□□□ -2.37
SEM1-216ENST00000616956 IGF2RP11717 2491 aa0.25□□□□□ -2.37
SEM1-216ENST00000616956 BCORQ6W2J9 1755 aa0.24□□□□□ -2.37
SEM1-216ENST00000616956 PIK3C2BO00750 1634 aa0.24□□□□□ -2.37
SEM1-216ENST00000616956 CFAP74Q9C0B2 1584 aa0.24□□□□□ -2.37
SEM1-216ENST00000616956 CEP170BQ9Y4F5 1589 aaPredicted RBP0.24□□□□□ -2.37
SEM1-216ENST00000616956 MAGI3Q5TCQ9 1506 aa0.24□□□□□ -2.37
SEM1-216ENST00000616956 NAV2Q8IVL1 2488 aa0.24□□□□□ -2.37
SEM1-216ENST00000616956 LCE6AA0A183 80 aa0.24□□□□□ -2.37
SEM1-216ENST00000616956 NDUFA3O95167 84 aa0.24□□□□□ -2.37
SEM1-216ENST00000616956 PRM1P04553 51 aa0.24□□□□□ -2.37
SEM1-216ENST00000616956 RGPD8O14715 1765 aaPredicted RBP0.23□□□□□ -2.37
SEM1-216ENST00000616956 RGPD5Q99666 1765 aa0.23□□□□□ -2.37
SEM1-216ENST00000616956 UNC79Q9P2D8 2635 aa0.23□□□□□ -2.37
SEM1-216ENST00000616956 SYNE2Q8WXH0 6885 aaKnown RBP0.23□□□□□ -2.37
SEM1-216ENST00000616956 CCDC88BA6NC98 1476 aa0.22□□□□□ -2.37
SEM1-216ENST00000616956 LTN1O94822 1766 aa0.22□□□□□ -2.37
SEM1-216ENST00000616956 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
SEM1-216ENST00000616956 PREX1Q8TCU6 1659 aa0.22□□□□□ -2.37
SEM1-216ENST00000616956 MAP3K1Q13233 1512 aa0.22□□□□□ -2.37
SEM1-216ENST00000616956 M0R2T5 61 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms