RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 COPS9Q8WXC6 57 aa9.73□□□□□ -0.85
CBWD1-225ENST00000616944 XAGE1AQ9HD64 81 aa9.73□□□□□ -0.85
CBWD1-225ENST00000616944 GAGE2EQ4V326 116 aa9.72□□□□□ -0.85
CBWD1-225ENST00000616944 C9orf129Q5T035 196 aaKnown RBP9.72□□□□□ -0.85
CBWD1-225ENST00000616944 GAGE2DQ9UEU5 116 aa9.72□□□□□ -0.85
CBWD1-225ENST00000616944 DNAH5Q8TE73 4624 aa9.72□□□□□ -0.85
CBWD1-225ENST00000616944 A0A096LNI7 61 aa9.71□□□□□ -0.85
CBWD1-225ENST00000616944 IGLV5-52A0A0A0MRZ9 124 aa9.71□□□□□ -0.85
CBWD1-225ENST00000616944 A4D1N5 150 aa9.71□□□□□ -0.85
CBWD1-225ENST00000616944 C16orf90A8MZG2 172 aa9.71□□□□□ -0.85
CBWD1-225ENST00000616944 M0R143 59 aa9.71□□□□□ -0.85
CBWD1-225ENST00000616944 RPL24P83731 157 aaKnown RBP9.71□□□□□ -0.85
CBWD1-225ENST00000616944 Q8NDZ9 215 aa9.71□□□□□ -0.85
CBWD1-225ENST00000616944 PKHD1P08F94 4074 aa9.7□□□□□ -0.86
CBWD1-225ENST00000616944 SNHG12Q9BXW3 62 aa9.7□□□□□ -0.86
CBWD1-225ENST00000616944 PKIGQ9Y2B9 76 aa9.7□□□□□ -0.86
CBWD1-225ENST00000616944 A0A1B0GVY2 172 aa9.69□□□□□ -0.86
CBWD1-225ENST00000616944 GAGE2BQ13066 116 aa9.69□□□□□ -0.86
CBWD1-225ENST00000616944 NDUFC2O95298 119 aa9.68□□□□□ -0.86
CBWD1-225ENST00000616944 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
CBWD1-225ENST00000616944 TMEM238LA0A1B0GVL6 79 aa9.67□□□□□ -0.86
CBWD1-225ENST00000616944 A0A1B0GWB2 263 aa9.67□□□□□ -0.86
CBWD1-225ENST00000616944 A6NJY4 79 aa9.67□□□□□ -0.86
CBWD1-225ENST00000616944 IGKV2-28A0A075B6P5 120 aa9.67□□□□□ -0.86
CBWD1-225ENST00000616944 IGKV2D-28P01615 120 aa9.67□□□□□ -0.86
CBWD1-225ENST00000616944 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
CBWD1-225ENST00000616944 IGKV2-24A0A0C4DH68 120 aa9.66□□□□□ -0.86
CBWD1-225ENST00000616944 PANO1I0J062 215 aa9.66□□□□□ -0.86
CBWD1-225ENST00000616944 CHTF8P0CG12 524 aa9.66□□□□□ -0.86
CBWD1-225ENST00000616944 CFC1BP0CG36 223 aa9.66□□□□□ -0.86
CBWD1-225ENST00000616944 CFC1P0CG37 223 aa9.66□□□□□ -0.86
CBWD1-225ENST00000616944 VPREB1P12018 145 aa9.66□□□□□ -0.86
CBWD1-225ENST00000616944 KRTAP7-1Q8IUC3 87 aa9.66□□□□□ -0.86
CBWD1-225ENST00000616944 BATFQ16520 125 aa9.65□□□□□ -0.86
CBWD1-225ENST00000616944 NHP2Q9NX24 153 aaKnown RBP9.65□□□□□ -0.86
CBWD1-225ENST00000616944 A0A0B4J2C4 111 aa9.64□□□□□ -0.87
CBWD1-225ENST00000616944 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
CBWD1-225ENST00000616944 SERTAD4-AS1Q5TG53 156 aa9.64□□□□□ -0.87
CBWD1-225ENST00000616944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.64□□□□□ -0.87
CBWD1-225ENST00000616944 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
CBWD1-225ENST00000616944 LINC00337Q8N6G1 96 aa9.64□□□□□ -0.87
CBWD1-225ENST00000616944 SPACA4Q8TDM5 124 aa9.64□□□□□ -0.87
CBWD1-225ENST00000616944 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
CBWD1-225ENST00000616944 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
CBWD1-225ENST00000616944 A6NDN8 102 aa9.63□□□□□ -0.87
CBWD1-225ENST00000616944 K7ERJ3 54 aa9.63□□□□□ -0.87
CBWD1-225ENST00000616944 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
CBWD1-225ENST00000616944 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
CBWD1-225ENST00000616944 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
CBWD1-225ENST00000616944 NCR3O14931 201 aa9.6□□□□□ -0.87
CBWD1-225ENST00000616944 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
CBWD1-225ENST00000616944 Q6ZSA8 131 aa9.6□□□□□ -0.87
CBWD1-225ENST00000616944 FAM19A5Q7Z5A7 132 aaPredicted RBP9.59□□□□□ -0.87
CBWD1-225ENST00000616944 DNAH8Q96JB1 4490 aa9.58□□□□□ -0.88
CBWD1-225ENST00000616944 TRAV13-2A0A0B4J235 113 aa9.58□□□□□ -0.88
CBWD1-225ENST00000616944 RAB37Q96AX2 223 aa9.58□□□□□ -0.88
CBWD1-225ENST00000616944 PRO1854Q9UHT4 67 aa9.58□□□□□ -0.88
CBWD1-225ENST00000616944 M0R378 163 aa9.57□□□□□ -0.88
CBWD1-225ENST00000616944 IGLV6-57P01721 117 aa9.56□□□□□ -0.88
CBWD1-225ENST00000616944 COL5A1-AS1Q5SY13 56 aa9.56□□□□□ -0.88
CBWD1-225ENST00000616944 NKAPP1Q8N9T2 125 aa9.56□□□□□ -0.88
CBWD1-225ENST00000616944 FAM30AQ9NZY2 134 aa9.56□□□□□ -0.88
CBWD1-225ENST00000616944 C22orf24Q9Y442 160 aa9.56□□□□□ -0.88
CBWD1-225ENST00000616944 A0A087WYN8 130 aa9.56□□□□□ -0.88
CBWD1-225ENST00000616944 RPL13AP40429 203 aaKnown RBP9.56□□□□□ -0.88
CBWD1-225ENST00000616944 C7orf33Q8WU49 177 aa9.56□□□□□ -0.88
CBWD1-225ENST00000616944 M0QXV9 152 aa9.55□□□□□ -0.88
CBWD1-225ENST00000616944 TAX1BP3O14907 124 aa9.55□□□□□ -0.88
CBWD1-225ENST00000616944 MRPL55Q7Z7F7 128 aaKnown RBP9.55□□□□□ -0.88
CBWD1-225ENST00000616944 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
CBWD1-225ENST00000616944 LRP1BQ9NZR2 4599 aa9.55□□□□□ -0.88
CBWD1-225ENST00000616944 TRBV10-3A0A0K0K1G6 114 aa9.54□□□□□ -0.88
CBWD1-225ENST00000616944 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
CBWD1-225ENST00000616944 TSPAN13O95857 204 aa9.53□□□□□ -0.88
CBWD1-225ENST00000616944 LBHQ53QV2 105 aaPredicted RBP9.53□□□□□ -0.88
CBWD1-225ENST00000616944 OR13C6PQ8NH95 151 aa9.53□□□□□ -0.88
CBWD1-225ENST00000616944 DYNC1H1Q14204 4646 aaKnown RBP9.53□□□□□ -0.88
CBWD1-225ENST00000616944 S100A7L2Q5SY68 101 aa9.53□□□□□ -0.88
CBWD1-225ENST00000616944 LINC00167Q96N53 147 aa9.53□□□□□ -0.88
CBWD1-225ENST00000616944 BIRC6Q9NR09 4857 aa9.52□□□□□ -0.89
CBWD1-225ENST00000616944 IGLV1-50A0A075B6I6 118 aa9.51□□□□□ -0.89
CBWD1-225ENST00000616944 GAGE10A6NGK3 116 aa9.51□□□□□ -0.89
CBWD1-225ENST00000616944 PHF5AQ7RTV0 110 aaKnown RBP9.51□□□□□ -0.89
CBWD1-225ENST00000616944 H7C2G1 150 aa9.5□□□□□ -0.89
CBWD1-225ENST00000616944 CIRBP-AS1Q8TBR5 109 aa9.5□□□□□ -0.89
CBWD1-225ENST00000616944 SMIM11BQ8TCY0 68 aa9.5□□□□□ -0.89
CBWD1-225ENST00000616944 DPH3Q96FX2 82 aa9.5□□□□□ -0.89
CBWD1-225ENST00000616944 SCXQ7RTU7 201 aa9.49□□□□□ -0.89
CBWD1-225ENST00000616944 KCNQ1DNQ9H478 68 aa9.49□□□□□ -0.89
CBWD1-225ENST00000616944 C9orf118A6NHY6 69 aa9.49□□□□□ -0.89
CBWD1-225ENST00000616944 RPL28P46779 137 aaKnown RBP9.49□□□□□ -0.89
CBWD1-225ENST00000616944 RPL37AP8A6NKH3 93 aa9.48□□□□□ -0.89
CBWD1-225ENST00000616944 Q1RN00 199 aa9.48□□□□□ -0.89
CBWD1-225ENST00000616944 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
CBWD1-225ENST00000616944 TRAV23DV6A0A075B6W5 121 aa9.47□□□□□ -0.89
CBWD1-225ENST00000616944 NAA38Q9BRA0 125 aaKnown RBP9.47□□□□□ -0.89
CBWD1-225ENST00000616944 TRIAP1O43715 76 aa9.46□□□□□ -0.89
CBWD1-225ENST00000616944 H3BUT2 72 aa9.45□□□□□ -0.9
CBWD1-225ENST00000616944 PRYO14603 147 aa9.45□□□□□ -0.9
CBWD1-225ENST00000616944 ZNF73O43830 326 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms