RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 SCGB3A1Q96QR1 104 aa9.86□□□□□ -0.83
FAM228B-210ENST00000615575 ERASQ7Z444 233 aa9.85□□□□□ -0.83
FAM228B-210ENST00000615575 ZNF625Q96I27 306 aaPredicted RBP9.85□□□□□ -0.83
FAM228B-210ENST00000615575 NXT2Q9NPJ8 142 aaKnown RBP9.85□□□□□ -0.83
FAM228B-210ENST00000615575 FLGP20930 4061 aaPredicted RBP9.85□□□□□ -0.83
FAM228B-210ENST00000615575 IGLV9-49A0A0B4J1Y8 123 aa9.84□□□□□ -0.83
FAM228B-210ENST00000615575 SMCR5Q8TEV8 140 aa9.84□□□□□ -0.83
FAM228B-210ENST00000615575 RPS29P62273 56 aaKnown RBP9.83□□□□□ -0.84
FAM228B-210ENST00000615575 AKAP14Q86UN6 197 aa9.83□□□□□ -0.84
FAM228B-210ENST00000615575 M0R2T5 61 aa9.82□□□□□ -0.84
FAM228B-210ENST00000615575 SLC25A20O43772 301 aa9.82□□□□□ -0.84
FAM228B-210ENST00000615575 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
FAM228B-210ENST00000615575 CST9LQ9H4G1 147 aa9.82□□□□□ -0.84
FAM228B-210ENST00000615575 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
FAM228B-210ENST00000615575 GAGE2AQ6NT46 116 aa9.8□□□□□ -0.84
FAM228B-210ENST00000615575 H3BRM9 83 aa9.78□□□□□ -0.84
FAM228B-210ENST00000615575 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
FAM228B-210ENST00000615575 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
FAM228B-210ENST00000615575 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
FAM228B-210ENST00000615575 PRYO14603 147 aa9.77□□□□□ -0.84
FAM228B-210ENST00000615575 G0S2P27469 103 aa9.77□□□□□ -0.84
FAM228B-210ENST00000615575 COX17Q14061 63 aa9.76□□□□□ -0.85
FAM228B-210ENST00000615575 PEA15Q15121 130 aa9.76□□□□□ -0.85
FAM228B-210ENST00000615575 KIAA1644Q3SXP7 199 aa9.76□□□□□ -0.85
FAM228B-210ENST00000615575 SPRR1AP35321 89 aa9.75□□□□□ -0.85
FAM228B-210ENST00000615575 PMVKQ15126 192 aa9.75□□□□□ -0.85
FAM228B-210ENST00000615575 C9orf92A6NGG3 77 aa9.75□□□□□ -0.85
FAM228B-210ENST00000615575 KRTAP4-16G5E9R7 235 aaPredicted RBP9.75□□□□□ -0.85
FAM228B-210ENST00000615575 NCR3O14931 201 aa9.75□□□□□ -0.85
FAM228B-210ENST00000615575 ERC2-IT1O76042 136 aa9.75□□□□□ -0.85
FAM228B-210ENST00000615575 ZNF22P17026 224 aaPredicted RBP9.75□□□□□ -0.85
FAM228B-210ENST00000615575 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
FAM228B-210ENST00000615575 ETDCA0A1B0GVM5 59 aa9.74□□□□□ -0.85
FAM228B-210ENST00000615575 IGLC3P0DOY3 106 aa9.74□□□□□ -0.85
FAM228B-210ENST00000615575 SSBP3-AS1Q7Z2R9 100 aa9.74□□□□□ -0.85
FAM228B-210ENST00000615575 LINC00158P58513 81 aa9.71□□□□□ -0.86
FAM228B-210ENST00000615575 SSPOA2VEC9 5147 aa9.7□□□□□ -0.86
FAM228B-210ENST00000615575 KCNQ1DNQ9H478 68 aa9.7□□□□□ -0.86
FAM228B-210ENST00000615575 COX6B2Q6YFQ2 88 aa9.69□□□□□ -0.86
FAM228B-210ENST00000615575 C9orf153Q5TBE3 101 aa9.68□□□□□ -0.86
FAM228B-210ENST00000615575 USH2AO75445 5202 aa9.67□□□□□ -0.86
FAM228B-210ENST00000615575 hCG_2014768A0A024R1R8 64 aa9.67□□□□□ -0.86
FAM228B-210ENST00000615575 TRBV10-3A0A0K0K1G6 114 aa9.67□□□□□ -0.86
FAM228B-210ENST00000615575 B5MCH6 92 aa9.66□□□□□ -0.86
FAM228B-210ENST00000615575 NDUFA6P56556 154 aa9.66□□□□□ -0.86
FAM228B-210ENST00000615575 BOD1L2Q8IYS8 172 aa9.66□□□□□ -0.86
FAM228B-210ENST00000615575 Q9BRP9 147 aa9.66□□□□□ -0.86
FAM228B-210ENST00000615575 LINC01546A6NGU7 62 aa9.65□□□□□ -0.86
FAM228B-210ENST00000615575 LINC01549A6NIU2 74 aa9.63□□□□□ -0.87
FAM228B-210ENST00000615575 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
FAM228B-210ENST00000615575 MT-ND4LP03901 98 aa9.63□□□□□ -0.87
FAM228B-210ENST00000615575 ANAPC16Q96DE5 110 aa9.63□□□□□ -0.87
FAM228B-210ENST00000615575 SMIM13P0DJ93 91 aa9.63□□□□□ -0.87
FAM228B-210ENST00000615575 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
FAM228B-210ENST00000615575 SFTA2Q6UW10 78 aa9.61□□□□□ -0.87
FAM228B-210ENST00000615575 HRCT1Q6UXD1 115 aa9.6□□□□□ -0.87
FAM228B-210ENST00000615575 FA2HQ7L5A8 372 aa9.6□□□□□ -0.87
FAM228B-210ENST00000615575 A0A096LNJ9 63 aa9.59□□□□□ -0.87
FAM228B-210ENST00000615575 IGLV6-57P01721 117 aa9.59□□□□□ -0.87
FAM228B-210ENST00000615575 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
FAM228B-210ENST00000615575 Q6ZRX8 168 aa9.58□□□□□ -0.88
FAM228B-210ENST00000615575 FCGBPQ9Y6R7 5405 aaPredicted RBP9.58□□□□□ -0.88
FAM228B-210ENST00000615575 TRAV9-1A0A075B6T8 112 aa9.57□□□□□ -0.88
FAM228B-210ENST00000615575 SMCO4Q9NRQ5 59 aa9.57□□□□□ -0.88
FAM228B-210ENST00000615575 ATP6V1G1O75348 118 aa9.56□□□□□ -0.88
FAM228B-210ENST00000615575 MEIG1Q5JSS6 88 aa9.56□□□□□ -0.88
FAM228B-210ENST00000615575 ST20-AS1Q8NBB2 130 aa9.56□□□□□ -0.88
FAM228B-210ENST00000615575 LIMD2Q9BT23 127 aa9.54□□□□□ -0.88
FAM228B-210ENST00000615575 DDTP30046 118 aa9.52□□□□□ -0.88
FAM228B-210ENST00000615575 RPL37P61927 97 aaKnown RBP9.52□□□□□ -0.88
FAM228B-210ENST00000615575 S100A12P80511 92 aa9.52□□□□□ -0.88
FAM228B-210ENST00000615575 PMCHL1Q16048 86 aa9.52□□□□□ -0.88
FAM228B-210ENST00000615575 BAGE3Q86Y29 109 aa9.52□□□□□ -0.88
FAM228B-210ENST00000615575 TMEM223A0PJW6 202 aa9.5□□□□□ -0.89
FAM228B-210ENST00000615575 URB1-AS1Q96HZ7 61 aa9.5□□□□□ -0.89
FAM228B-210ENST00000615575 HBDP02042 147 aa9.47□□□□□ -0.89
FAM228B-210ENST00000615575 CHTOPQ9Y3Y2 248 aaKnown RBP9.47□□□□□ -0.89
FAM228B-210ENST00000615575 Q6Q795 121 aa9.45□□□□□ -0.9
FAM228B-210ENST00000615575 KRTAP9-8Q9BYQ0 159 aa9.45□□□□□ -0.9
FAM228B-210ENST00000615575 H7C2G1 150 aa9.44□□□□□ -0.9
FAM228B-210ENST00000615575 FABP9Q0Z7S8 132 aa9.44□□□□□ -0.9
FAM228B-210ENST00000615575 TRBV10-2A0A0K0K1G8 114 aa9.43□□□□□ -0.9
FAM228B-210ENST00000615575 HERV-K104P63124 156 aa9.43□□□□□ -0.9
FAM228B-210ENST00000615575 TRAV23DV6A0A075B6W5 121 aa9.42□□□□□ -0.9
FAM228B-210ENST00000615575 CFC1P0CG37 223 aa9.42□□□□□ -0.9
FAM228B-210ENST00000615575 JOSD1Q15040 202 aaPredicted RBP9.42□□□□□ -0.9
FAM228B-210ENST00000615575 KRTAP19-1Q8IUB9 90 aa9.42□□□□□ -0.9
FAM228B-210ENST00000615575 SPANXB1Q9NS25 103 aaPredicted RBP9.41□□□□□ -0.9
FAM228B-210ENST00000615575 LINC00614P0C842 121 aa9.4□□□□□ -0.9
FAM228B-210ENST00000615575 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.9
FAM228B-210ENST00000615575 MACF1Q9UPN3 7388 aaKnown RBP9.4□□□□□ -0.91
FAM228B-210ENST00000615575 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
FAM228B-210ENST00000615575 S100A7L2Q5SY68 101 aa9.39□□□□□ -0.91
FAM228B-210ENST00000615575 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
FAM228B-210ENST00000615575 MAP1LC3CQ9BXW4 147 aa9.39□□□□□ -0.91
FAM228B-210ENST00000615575 LOC107984156A0A0G2JMH3 177 aa9.38□□□□□ -0.91
FAM228B-210ENST00000615575 ZNF73O43830 326 aaPredicted RBP9.38□□□□□ -0.91
FAM228B-210ENST00000615575 SPRR1BP22528 89 aa9.38□□□□□ -0.91
FAM228B-210ENST00000615575 ARL17AQ8IVW1 177 aa9.38□□□□□ -0.91
FAM228B-210ENST00000615575 RPS10P5Q9NQ39 176 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms