RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ZNF702PQ9H963 129 aa9.64□□□□□ -0.87
CHD1-212ENST00000614616 COA5Q86WW8 74 aa9.64□□□□□ -0.87
CHD1-212ENST00000614616 LOC101927531A0A1B0GV80 90 aa9.63□□□□□ -0.87
CHD1-212ENST00000614616 CIRBP-AS1Q8TBR5 109 aa9.63□□□□□ -0.87
CHD1-212ENST00000614616 C10orf99Q6UWK7 81 aa9.63□□□□□ -0.87
CHD1-212ENST00000614616 A0A1W2PNU3 283 aaPredicted RBP9.63□□□□□ -0.87
CHD1-212ENST00000614616 SPINK1P00995 79 aa9.63□□□□□ -0.87
CHD1-212ENST00000614616 IGHV3OR16-9A0A0B4J2B5 98 aa9.62□□□□□ -0.87
CHD1-212ENST00000614616 LINC01006Q8NI28 216 aa9.62□□□□□ -0.87
CHD1-212ENST00000614616 LITAFQ99732 161 aa9.62□□□□□ -0.87
CHD1-212ENST00000614616 WISP2O76076 250 aa9.61□□□□□ -0.87
CHD1-212ENST00000614616 LINC00315P59091 139 aa9.61□□□□□ -0.87
CHD1-212ENST00000614616 ZFYVE26Q68DK2 2539 aa9.6□□□□□ -0.87
CHD1-212ENST00000614616 Q8NA96 180 aa9.6□□□□□ -0.87
CHD1-212ENST00000614616 Q1T7F1 81 aa9.59□□□□□ -0.87
CHD1-212ENST00000614616 Q8NBF4 154 aa9.59□□□□□ -0.87
CHD1-212ENST00000614616 BDP1A6H8Y1 2624 aa9.59□□□□□ -0.87
CHD1-212ENST00000614616 C18orf65Q6ZTR6 163 aa9.58□□□□□ -0.88
CHD1-212ENST00000614616 X6R8D5 127 aa9.58□□□□□ -0.88
CHD1-212ENST00000614616 PRLHP81277 87 aa9.58□□□□□ -0.88
CHD1-212ENST00000614616 A0A0C4DFX4 3053 aa9.58□□□□□ -0.88
CHD1-212ENST00000614616 UQCR11O14957 56 aa9.58□□□□□ -0.88
CHD1-212ENST00000614616 ZFHX2Q9C0A1 2572 aaPredicted RBP9.58□□□□□ -0.88
CHD1-212ENST00000614616 ACANP16112 2415 aa9.57□□□□□ -0.88
CHD1-212ENST00000614616 ZNF462Q96JM2 2506 aa9.57□□□□□ -0.88
CHD1-212ENST00000614616 SETD2Q9BYW2 2564 aaPredicted RBP9.56□□□□□ -0.88
CHD1-212ENST00000614616 TRBV7-4A0A0J9YYF1 115 aa9.54□□□□□ -0.88
CHD1-212ENST00000614616 LY6G6DO95868 133 aa9.53□□□□□ -0.88
CHD1-212ENST00000614616 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
CHD1-212ENST00000614616 CDC42SE1Q9NRR8 79 aa9.52□□□□□ -0.89
CHD1-212ENST00000614616 IGLV6-57P01721 117 aa9.52□□□□□ -0.89
CHD1-212ENST00000614616 MIR22HGQ0VDD5 57 aa9.51□□□□□ -0.89
CHD1-212ENST00000614616 SSBP3-AS1Q7Z2R9 100 aa9.51□□□□□ -0.89
CHD1-212ENST00000614616 IGKV2D-30A0A075B6S6 120 aa9.51□□□□□ -0.89
CHD1-212ENST00000614616 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
CHD1-212ENST00000614616 Q6ZRU5 148 aa9.51□□□□□ -0.89
CHD1-212ENST00000614616 LINC00476Q8WZB0 136 aa9.5□□□□□ -0.89
CHD1-212ENST00000614616 F8P00451 2351 aa9.5□□□□□ -0.89
CHD1-212ENST00000614616 PLA2G2AP14555 144 aa9.5□□□□□ -0.89
CHD1-212ENST00000614616 SPANXA2-OT1Q8N9U9 137 aa9.5□□□□□ -0.89
CHD1-212ENST00000614616 IGLV8-61A0A075B6I0 122 aa9.49□□□□□ -0.89
CHD1-212ENST00000614616 MOBPQ13875 183 aa9.49□□□□□ -0.89
CHD1-212ENST00000614616 PKD1L2Q7Z442 2459 aa9.49□□□□□ -0.89
CHD1-212ENST00000614616 C19orf84I3L1E1 186 aa9.49□□□□□ -0.89
CHD1-212ENST00000614616 K7EQZ3 153 aa9.48□□□□□ -0.89
CHD1-212ENST00000614616 A8MWP4 228 aa9.48□□□□□ -0.89
CHD1-212ENST00000614616 Q6ZRX8 168 aa9.48□□□□□ -0.89
CHD1-212ENST00000614616 CDSNQ15517 529 aa9.48□□□□□ -0.89
CHD1-212ENST00000614616 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
CHD1-212ENST00000614616 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
CHD1-212ENST00000614616 ABCA12Q86UK0 2595 aa9.46□□□□□ -0.89
CHD1-212ENST00000614616 H3BS24 57 aa9.46□□□□□ -0.89
CHD1-212ENST00000614616 Q5XG85 94 aa9.46□□□□□ -0.9
CHD1-212ENST00000614616 LINC01600Q96MT4 127 aa9.46□□□□□ -0.9
CHD1-212ENST00000614616 LYPD5Q6UWN5 251 aa9.43□□□□□ -0.9
CHD1-212ENST00000614616 C5orf42Q9H799 3197 aa9.43□□□□□ -0.9
CHD1-212ENST00000614616 IGLV1-51P01701 117 aa9.43□□□□□ -0.9
CHD1-212ENST00000614616 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
CHD1-212ENST00000614616 LINC00167Q96N53 147 aa9.4□□□□□ -0.9
CHD1-212ENST00000614616 RPL37AP61513 92 aaKnown RBP9.4□□□□□ -0.9
CHD1-212ENST00000614616 LINC00313P59037 77 aa9.4□□□□□ -0.9
CHD1-212ENST00000614616 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
CHD1-212ENST00000614616 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
CHD1-212ENST00000614616 USP9XQ93008 2570 aaPredicted RBP9.38□□□□□ -0.91
CHD1-212ENST00000614616 J3QKU1 62 aa9.36□□□□□ -0.91
CHD1-212ENST00000614616 OBSCN-AS1Q96MR7 158 aa9.36□□□□□ -0.91
CHD1-212ENST00000614616 CRIPTQ9P021 101 aa9.36□□□□□ -0.91
CHD1-212ENST00000614616 Q75L30 129 aa9.35□□□□□ -0.91
CHD1-212ENST00000614616 NAV2Q8IVL1 2488 aa9.33□□□□□ -0.92
CHD1-212ENST00000614616 CHD8Q9HCK8 2581 aa9.32□□□□□ -0.92
CHD1-212ENST00000614616 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
CHD1-212ENST00000614616 MRPL34Q9BQ48 92 aaKnown RBP9.3□□□□□ -0.92
CHD1-212ENST00000614616 JMJD1CQ15652 2540 aa9.3□□□□□ -0.92
CHD1-212ENST00000614616 ANKRD11Q6UB99 2663 aaPredicted RBP9.29□□□□□ -0.92
CHD1-212ENST00000614616 EIF4EBP3O60516 100 aaPredicted RBP9.29□□□□□ -0.92
CHD1-212ENST00000614616 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
CHD1-212ENST00000614616 OCR1Q9BZK8 76 aa9.29□□□□□ -0.92
CHD1-212ENST00000614616 LINC01554Q52M75 96 aa9.28□□□□□ -0.92
CHD1-212ENST00000614616 SPTBN4Q9H254 2564 aa9.28□□□□□ -0.92
CHD1-212ENST00000614616 ST20-AS1Q8NBB2 130 aa9.27□□□□□ -0.92
CHD1-212ENST00000614616 IGLV5-52A0A0A0MRZ9 124 aa9.27□□□□□ -0.93
CHD1-212ENST00000614616 POLQO75417 2590 aa9.27□□□□□ -0.93
CHD1-212ENST00000614616 C10orf142B7Z368 130 aa9.27□□□□□ -0.93
CHD1-212ENST00000614616 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.93
CHD1-212ENST00000614616 M0R2N4 97 aa9.26□□□□□ -0.93
CHD1-212ENST00000614616 C9orf129Q5T035 196 aaKnown RBP9.26□□□□□ -0.93
CHD1-212ENST00000614616 FP248Q71RG6 208 aaPredicted RBP9.26□□□□□ -0.93
CHD1-212ENST00000614616 Q6ZRP5 223 aa9.26□□□□□ -0.93
CHD1-212ENST00000614616 AVPP01185 164 aa9.26□□□□□ -0.93
CHD1-212ENST00000614616 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
CHD1-212ENST00000614616 NCOR2Q9Y618 2525 aa9.25□□□□□ -0.93
CHD1-212ENST00000614616 KCNQ1DNQ9H478 68 aa9.25□□□□□ -0.93
CHD1-212ENST00000614616 LAMA2P24043 3122 aaKnown RBP9.25□□□□□ -0.93
CHD1-212ENST00000614616 CFAP54Q96N23 3096 aa9.23□□□□□ -0.93
CHD1-212ENST00000614616 USP9YO00507 2555 aaPredicted RBP9.23□□□□□ -0.93
CHD1-212ENST00000614616 C16orf95Q9H693 158 aa9.23□□□□□ -0.93
CHD1-212ENST00000614616 NUPR2A6NF83 97 aa9.22□□□□□ -0.93
CHD1-212ENST00000614616 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
CHD1-212ENST00000614616 H3BNG1 76 aa9.22□□□□□ -0.93
CHD1-212ENST00000614616 CEP295Q9C0D2 2601 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms