RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, human

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-223	ENST00000613988	SPAG11B	Q08648	103 aa		13.86	□□□□□ -0.19
CBWD1-223	ENST00000613988		Q6ZVH6	145 aa		13.86	□□□□□ -0.19
CBWD1-223	ENST00000613988	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
CBWD1-223	ENST00000613988	SERTAD4-AS1	Q5TG53	156 aa		13.85	□□□□□ -0.19
CBWD1-223	ENST00000613988	HINT1	P49773	126 aa	Predicted RBP	13.84	□□□□□ -0.19
CBWD1-223	ENST00000613988	BVES-AS1	Q5T3Y7	98 aa		13.84	□□□□□ -0.19
CBWD1-223	ENST00000613988	SNHG12	Q9BXW3	62 aa		13.84	□□□□□ -0.19
CBWD1-223	ENST00000613988		F8WDY8	70 aa		13.83	□□□□□ -0.19
CBWD1-223	ENST00000613988	CEND1	Q8N111	149 aa		13.83	□□□□□ -0.19
CBWD1-223	ENST00000613988	C15orf56	Q8N910	161 aa		13.83	□□□□□ -0.19
CBWD1-223	ENST00000613988	LITAF	Q99732	161 aa		13.83	□□□□□ -0.19
CBWD1-223	ENST00000613988	SPANXD	Q9BXN6	97 aa		13.83	□□□□□ -0.19
CBWD1-223	ENST00000613988	SPANXC	Q9NY87	97 aa		13.83	□□□□□ -0.19
CBWD1-223	ENST00000613988	MEIG1	Q5JSS6	88 aa		13.83	□□□□□ -0.2
CBWD1-223	ENST00000613988	CHTF8	P0CG12	524 aa		13.82	□□□□□ -0.2
CBWD1-223	ENST00000613988	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.81	□□□□□ -0.2
CBWD1-223	ENST00000613988	ZNF561-AS1	K7EIQ3	104 aa		13.81	□□□□□ -0.2
CBWD1-223	ENST00000613988	LBH	Q53QV2	105 aa	Predicted RBP	13.81	□□□□□ -0.2
CBWD1-223	ENST00000613988	C2orf48	Q96LS8	159 aa		13.81	□□□□□ -0.2
CBWD1-223	ENST00000613988		A0A087WYN8	130 aa		13.8	□□□□□ -0.2
CBWD1-223	ENST00000613988	HMCN2	Q8NDA2	5059 aa		13.79	□□□□□ -0.2
CBWD1-223	ENST00000613988	IFITM1	P13164	125 aa		13.79	□□□□□ -0.2
CBWD1-223	ENST00000613988	BATF	Q16520	125 aa		13.79	□□□□□ -0.2
CBWD1-223	ENST00000613988	HIGD2B	Q4VC39	106 aa		13.79	□□□□□ -0.2
CBWD1-223	ENST00000613988	C2orf82	Q6UX34	121 aa		13.79	□□□□□ -0.2
CBWD1-223	ENST00000613988	SPACA4	Q8TDM5	124 aa		13.79	□□□□□ -0.2
CBWD1-223	ENST00000613988	COPS9	Q8WXC6	57 aa		13.79	□□□□□ -0.2
CBWD1-223	ENST00000613988	COX17	Q14061	63 aa		13.78	□□□□□ -0.2
CBWD1-223	ENST00000613988	ADAMTSL4-AS1	Q5T5F5	129 aa		13.78	□□□□□ -0.2
CBWD1-223	ENST00000613988	ERG28	Q9UKR5	140 aa		13.78	□□□□□ -0.2
CBWD1-223	ENST00000613988	TMEM238L	A0A1B0GVL6	79 aa		13.77	□□□□□ -0.21
CBWD1-223	ENST00000613988		A6NJY4	79 aa		13.77	□□□□□ -0.21
CBWD1-223	ENST00000613988	PTTG1IP	P53801	180 aa		13.77	□□□□□ -0.21
CBWD1-223	ENST00000613988	PPDPF	Q9H3Y8	114 aa		13.77	□□□□□ -0.21
CBWD1-223	ENST00000613988		A6NDN8	102 aa		13.76	□□□□□ -0.21
CBWD1-223	ENST00000613988	SMIM13	P0DJ93	91 aa		13.76	□□□□□ -0.21
CBWD1-223	ENST00000613988	FXYD2	P54710	66 aa		13.75	□□□□□ -0.21
CBWD1-223	ENST00000613988	RPL24	P83731	157 aa	Known RBP	13.75	□□□□□ -0.21
CBWD1-223	ENST00000613988	TRBV30	A0A0K0K1B3	111 aa		13.74	□□□□□ -0.21
CBWD1-223	ENST00000613988	COL5A1-AS1	Q5SY13	56 aa		13.74	□□□□□ -0.21
CBWD1-223	ENST00000613988	PLAC8	Q9NZF1	115 aa		13.74	□□□□□ -0.21
CBWD1-223	ENST00000613988	LINC00158	P58513	81 aa		13.73	□□□□□ -0.21
CBWD1-223	ENST00000613988	UNQ6190/PRO20217	Q6UXQ8	127 aa		13.73	□□□□□ -0.21
CBWD1-223	ENST00000613988	MUSTN1	Q8IVN3	82 aa		13.73	□□□□□ -0.21
CBWD1-223	ENST00000613988	CAMK2N2	Q96S95	79 aa		13.73	□□□□□ -0.21
CBWD1-223	ENST00000613988		Q6ZRU5	148 aa		13.72	□□□□□ -0.21
CBWD1-223	ENST00000613988	LINC00526	Q96FQ7	95 aa		13.72	□□□□□ -0.21
CBWD1-223	ENST00000613988	IGKV2-24	A0A0C4DH68	120 aa		13.71	□□□□□ -0.21
CBWD1-223	ENST00000613988		A0A0U1RRA0	63 aa		13.71	□□□□□ -0.22
CBWD1-223	ENST00000613988	PFN2	P35080	140 aa		13.71	□□□□□ -0.22
CBWD1-223	ENST00000613988	C10orf25	Q5T742	122 aa		13.71	□□□□□ -0.22
CBWD1-223	ENST00000613988	MIR7-3HG	Q8N6C7	128 aa		13.71	□□□□□ -0.22
CBWD1-223	ENST00000613988	LINC00308	Q8TCZ7	52 aa		13.71	□□□□□ -0.22
CBWD1-223	ENST00000613988	C7orf33	Q8WU49	177 aa		13.71	□□□□□ -0.22
CBWD1-223	ENST00000613988	DAND5	Q8N907	189 aa		13.7	□□□□□ -0.22
CBWD1-223	ENST00000613988	PLA2G2D	Q9UNK4	145 aa		13.7	□□□□□ -0.22
CBWD1-223	ENST00000613988	SYCN	Q0VAF6	134 aa		13.69	□□□□□ -0.22
CBWD1-223	ENST00000613988	C6orf48	Q9UBA6	75 aa		13.69	□□□□□ -0.22
CBWD1-223	ENST00000613988		A0A1B0GWB2	263 aa		13.68	□□□□□ -0.22
CBWD1-223	ENST00000613988	RNF151	Q2KHN1	245 aa		13.68	□□□□□ -0.22
CBWD1-223	ENST00000613988		A4D1N5	150 aa		13.67	□□□□□ -0.22
CBWD1-223	ENST00000613988	NHP2	Q9NX24	153 aa	Known RBP	13.67	□□□□□ -0.22
CBWD1-223	ENST00000613988	UBR4	Q5T4S7	5183 aa		13.65	□□□□□ -0.22
CBWD1-223	ENST00000613988		A0A096LNI7	61 aa		13.65	□□□□□ -0.22
CBWD1-223	ENST00000613988	LOC107984156	A0A0G2JMH3	177 aa		13.65	□□□□□ -0.22
CBWD1-223	ENST00000613988	MT1HL1	P0DM35	61 aa		13.65	□□□□□ -0.22
CBWD1-223	ENST00000613988	C9orf116	Q5BN46	136 aa	Predicted RBP	13.65	□□□□□ -0.22
CBWD1-223	ENST00000613988	ARL17A	Q8IVW1	177 aa		13.65	□□□□□ -0.22
CBWD1-223	ENST00000613988	NPC2	P61916	151 aa		13.64	□□□□□ -0.23
CBWD1-223	ENST00000613988	SOSTDC1	Q6X4U4	206 aa		13.64	□□□□□ -0.23
CBWD1-223	ENST00000613988	CARD19	Q96LW7	228 aa		13.64	□□□□□ -0.23
CBWD1-223	ENST00000613988	LINC00474	Q9P2X8	69 aa		13.64	□□□□□ -0.23
CBWD1-223	ENST00000613988	PKIG	Q9Y2B9	76 aa		13.64	□□□□□ -0.23
CBWD1-223	ENST00000613988		A0A0B4J2C4	111 aa		13.62	□□□□□ -0.23
CBWD1-223	ENST00000613988	EIF4EBP3	O60516	100 aa	Predicted RBP	13.61	□□□□□ -0.23
CBWD1-223	ENST00000613988	CFC1B	P0CG36	223 aa		13.61	□□□□□ -0.23
CBWD1-223	ENST00000613988	CFC1	P0CG37	223 aa		13.61	□□□□□ -0.23
CBWD1-223	ENST00000613988	NDUFC2-KCTD14	E9PQ53	114 aa		13.59	□□□□□ -0.23
CBWD1-223	ENST00000613988	TAX1BP3	O14907	124 aa		13.59	□□□□□ -0.23
CBWD1-223	ENST00000613988	TLX1NB	P0CAT3	122 aa		13.59	□□□□□ -0.23
CBWD1-223	ENST00000613988	PRR3	P79522	188 aa	Known RBP	13.59	□□□□□ -0.23
CBWD1-223	ENST00000613988	SND1-IT1	Q9HBX3	110 aa		13.59	□□□□□ -0.23
CBWD1-223	ENST00000613988	RAB37	Q96AX2	223 aa		13.58	□□□□□ -0.23
CBWD1-223	ENST00000613988		K7ERJ3	54 aa		13.58	□□□□□ -0.24
CBWD1-223	ENST00000613988	PRO1854	Q9UHT4	67 aa		13.58	□□□□□ -0.24
CBWD1-223	ENST00000613988	TNXB	P22105	4242 aa		13.57	□□□□□ -0.24
CBWD1-223	ENST00000613988	NDUFC2	O95298	119 aa		13.56	□□□□□ -0.24
CBWD1-223	ENST00000613988	C9orf118	A6NHY6	69 aa		13.54	□□□□□ -0.24
CBWD1-223	ENST00000613988	LOC107984640	A0A0U1RRK4	108 aa		13.53	□□□□□ -0.24
CBWD1-223	ENST00000613988	GAGE2B	Q13066	116 aa		13.53	□□□□□ -0.24
CBWD1-223	ENST00000613988	TRAV13-2	A0A0B4J235	113 aa		13.51	□□□□□ -0.25
CBWD1-223	ENST00000613988		Q6ZRP5	223 aa		13.5	□□□□□ -0.25
CBWD1-223	ENST00000613988	LINC01600	Q96MT4	127 aa		13.5	□□□□□ -0.25
CBWD1-223	ENST00000613988	IGKV2-28	A0A075B6P5	120 aa		13.48	□□□□□ -0.25
CBWD1-223	ENST00000613988	IGKV2D-28	P01615	120 aa		13.48	□□□□□ -0.25
CBWD1-223	ENST00000613988	SPINK6	Q6UWN8	80 aa		13.48	□□□□□ -0.25
CBWD1-223	ENST00000613988	TSPAN13	O95857	204 aa		13.47	□□□□□ -0.25
CBWD1-223	ENST00000613988	RPL18A	Q02543	176 aa	Known RBP	13.47	□□□□□ -0.25
CBWD1-223	ENST00000613988	GAGE2E	Q4V326	116 aa		13.47	□□□□□ -0.25
CBWD1-223	ENST00000613988	XAGE1A	Q9HD64	81 aa		13.47	□□□□□ -0.25

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