RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PFN2P35080 140 aa7.4□□□□□ -1.22
SLIRP-212ENST00000613856 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
SLIRP-212ENST00000613856 MIR7-3HGQ8N6C7 128 aa7.4□□□□□ -1.22
SLIRP-212ENST00000613856 COPS9Q8WXC6 57 aa7.4□□□□□ -1.22
SLIRP-212ENST00000613856 A0A0U1RRA0 63 aa7.39□□□□□ -1.23
SLIRP-212ENST00000613856 EPM2AB3EWF7 344 aa7.39□□□□□ -1.23
SLIRP-212ENST00000613856 NDUFC2-KCTD14E9PQ53 114 aa7.39□□□□□ -1.23
SLIRP-212ENST00000613856 M0R143 59 aa7.39□□□□□ -1.23
SLIRP-212ENST00000613856 EREGO14944 169 aa7.39□□□□□ -1.23
SLIRP-212ENST00000613856 CEND1Q8N111 149 aa7.39□□□□□ -1.23
SLIRP-212ENST00000613856 DAND5Q8N907 189 aa7.39□□□□□ -1.23
SLIRP-212ENST00000613856 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-212ENST00000613856 LOC107984156A0A0G2JMH3 177 aa7.38□□□□□ -1.23
SLIRP-212ENST00000613856 ARL17AQ8IVW1 177 aa7.38□□□□□ -1.23
SLIRP-212ENST00000613856 LINC00308Q8TCZ7 52 aa7.38□□□□□ -1.23
SLIRP-212ENST00000613856 PKIGQ9Y2B9 76 aa7.38□□□□□ -1.23
SLIRP-212ENST00000613856 UBR4Q5T4S7 5183 aa7.38□□□□□ -1.23
SLIRP-212ENST00000613856 LOC107984640A0A0U1RRK4 108 aa7.37□□□□□ -1.23
SLIRP-212ENST00000613856 BVES-AS1Q5T3Y7 98 aa7.37□□□□□ -1.23
SLIRP-212ENST00000613856 SOSTDC1Q6X4U4 206 aa7.37□□□□□ -1.23
SLIRP-212ENST00000613856 MUSTN1Q8IVN3 82 aa7.37□□□□□ -1.23
SLIRP-212ENST00000613856 C9orf163Q8N9P6 203 aa7.37□□□□□ -1.23
SLIRP-212ENST00000613856 FXYD2P54710 66 aa7.36□□□□□ -1.23
SLIRP-212ENST00000613856 RPL24P83731 157 aaKnown RBP7.36□□□□□ -1.23
SLIRP-212ENST00000613856 SND1-IT1Q9HBX3 110 aa7.36□□□□□ -1.23
SLIRP-212ENST00000613856 TMEM238LA0A1B0GVL6 79 aa7.35□□□□□ -1.23
SLIRP-212ENST00000613856 A6NJY4 79 aa7.35□□□□□ -1.23
SLIRP-212ENST00000613856 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
SLIRP-212ENST00000613856 HINT1P49773 126 aaPredicted RBP7.35□□□□□ -1.23
SLIRP-212ENST00000613856 XGP55808 180 aa7.35□□□□□ -1.23
SLIRP-212ENST00000613856 Q6ZRP5 223 aa7.35□□□□□ -1.23
SLIRP-212ENST00000613856 NPC2P61916 151 aa7.34□□□□□ -1.23
SLIRP-212ENST00000613856 RPL18AQ02543 176 aaKnown RBP7.34□□□□□ -1.23
SLIRP-212ENST00000613856 Q5VSD8 79 aa7.34□□□□□ -1.23
SLIRP-212ENST00000613856 A4D1N5 150 aa7.33□□□□□ -1.24
SLIRP-212ENST00000613856 NDUFC2O95298 119 aa7.33□□□□□ -1.24
SLIRP-212ENST00000613856 SNHG12Q9BXW3 62 aa7.33□□□□□ -1.24
SLIRP-212ENST00000613856 VPS13BQ7Z7G8 4022 aa7.32□□□□□ -1.24
SLIRP-212ENST00000613856 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
SLIRP-212ENST00000613856 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
SLIRP-212ENST00000613856 A0A0B4J2C4 111 aa7.31□□□□□ -1.24
SLIRP-212ENST00000613856 A6NDN8 102 aa7.31□□□□□ -1.24
SLIRP-212ENST00000613856 HAMPP81172 84 aa7.31□□□□□ -1.24
SLIRP-212ENST00000613856 GAGE2EQ4V326 116 aa7.31□□□□□ -1.24
SLIRP-212ENST00000613856 C9orf129Q5T035 196 aaKnown RBP7.31□□□□□ -1.24
SLIRP-212ENST00000613856 SDIM1Q6ZPB5 146 aa7.31□□□□□ -1.24
SLIRP-212ENST00000613856 XAGE1AQ9HD64 81 aa7.31□□□□□ -1.24
SLIRP-212ENST00000613856 GAGE2DQ9UEU5 116 aa7.31□□□□□ -1.24
SLIRP-212ENST00000613856 PLA2G2DQ9UNK4 145 aa7.31□□□□□ -1.24
SLIRP-212ENST00000613856 A0A096LNI7 61 aa7.3□□□□□ -1.24
SLIRP-212ENST00000613856 SMR3BP02814 79 aaPredicted RBP7.3□□□□□ -1.24
SLIRP-212ENST00000613856 GAGE2BQ13066 116 aa7.3□□□□□ -1.24
SLIRP-212ENST00000613856 BATFQ16520 125 aa7.3□□□□□ -1.24
SLIRP-212ENST00000613856 NHP2Q9NX24 153 aaKnown RBP7.3□□□□□ -1.24
SLIRP-212ENST00000613856 PGPEP1Q9NXJ5 209 aa7.3□□□□□ -1.24
SLIRP-212ENST00000613856 CFC1BP0CG36 223 aa7.29□□□□□ -1.24
SLIRP-212ENST00000613856 CFC1P0CG37 223 aa7.29□□□□□ -1.24
SLIRP-212ENST00000613856 LINC00474Q9P2X8 69 aa7.29□□□□□ -1.24
SLIRP-212ENST00000613856 SRRM2Q9UQ35 2752 aaKnown RBP7.29□□□□□ -1.24
SLIRP-212ENST00000613856 IGLV5-37A0A075B6J1 123 aa7.28□□□□□ -1.24
SLIRP-212ENST00000613856 IGKV2-28A0A075B6P5 120 aa7.28□□□□□ -1.24
SLIRP-212ENST00000613856 TRBV10-2A0A0K0K1G8 114 aa7.28□□□□□ -1.24
SLIRP-212ENST00000613856 IGKV2D-28P01615 120 aa7.28□□□□□ -1.24
SLIRP-212ENST00000613856 VPREB1P12018 145 aa7.28□□□□□ -1.24
SLIRP-212ENST00000613856 Q8NDZ9 215 aa7.28□□□□□ -1.24
SLIRP-212ENST00000613856 KRTAP10-1P60331 282 aa7.27□□□□□ -1.25
SLIRP-212ENST00000613856 LINC01620Q4KN68 170 aa7.27□□□□□ -1.25
SLIRP-212ENST00000613856 TRAV13-2A0A0B4J235 113 aa7.26□□□□□ -1.25
SLIRP-212ENST00000613856 IGKV2-24A0A0C4DH68 120 aa7.26□□□□□ -1.25
SLIRP-212ENST00000613856 K7ERJ3 54 aa7.26□□□□□ -1.25
SLIRP-212ENST00000613856 LBHQ53QV2 105 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-212ENST00000613856 COL5A1-AS1Q5SY13 56 aa7.26□□□□□ -1.25
SLIRP-212ENST00000613856 SPACA4Q8TDM5 124 aa7.26□□□□□ -1.25
SLIRP-212ENST00000613856 RAB37Q96AX2 223 aa7.26□□□□□ -1.25
SLIRP-212ENST00000613856 SERTAD4-AS1Q5TG53 156 aa7.25□□□□□ -1.25
SLIRP-212ENST00000613856 LINC00337Q8N6G1 96 aa7.25□□□□□ -1.25
SLIRP-212ENST00000613856 PRO1854Q9UHT4 67 aa7.25□□□□□ -1.25
SLIRP-212ENST00000613856 DNAH8Q96JB1 4490 aa7.24□□□□□ -1.25
SLIRP-212ENST00000613856 NCR3O14931 201 aa7.24□□□□□ -1.25
SLIRP-212ENST00000613856 CHTF8P0CG12 524 aa7.24□□□□□ -1.25
SLIRP-212ENST00000613856 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
SLIRP-212ENST00000613856 HMCN2Q8NDA2 5059 aa7.24□□□□□ -1.25
SLIRP-212ENST00000613856 FAM168BA1KXE4 195 aa7.23□□□□□ -1.25
SLIRP-212ENST00000613856 M0R378 163 aa7.23□□□□□ -1.25
SLIRP-212ENST00000613856 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
SLIRP-212ENST00000613856 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
SLIRP-212ENST00000613856 NKAPP1Q8N9T2 125 aa7.23□□□□□ -1.25
SLIRP-212ENST00000613856 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-212ENST00000613856 PANO1I0J062 215 aa7.22□□□□□ -1.25
SLIRP-212ENST00000613856 J3QL48 77 aa7.22□□□□□ -1.25
SLIRP-212ENST00000613856 LCE2BO14633 110 aa7.22□□□□□ -1.25
SLIRP-212ENST00000613856 TAX1BP3O14907 124 aa7.22□□□□□ -1.25
SLIRP-212ENST00000613856 IGLV6-57P01721 117 aa7.22□□□□□ -1.25
SLIRP-212ENST00000613856 Q6ZSA8 131 aa7.22□□□□□ -1.25
SLIRP-212ENST00000613856 FAM19A5Q7Z5A7 132 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-212ENST00000613856 TMEM126AQ9H061 195 aa7.22□□□□□ -1.25
SLIRP-212ENST00000613856 A0A1W2PNN7 141 aa7.21□□□□□ -1.26
SLIRP-212ENST00000613856 TSPAN13O95857 204 aa7.21□□□□□ -1.26
SLIRP-212ENST00000613856 C22orf24Q9Y442 160 aa7.21□□□□□ -1.26
SLIRP-212ENST00000613856 M0QXV9 152 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms