RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.55□□□□□ -1.2
CDC42EP3-206ENST00000611976 IL17DQ8TAD2 202 aa7.55□□□□□ -1.2
CDC42EP3-206ENST00000611976 USP9XQ93008 2570 aaPredicted RBP7.55□□□□□ -1.2
CDC42EP3-206ENST00000611976 REG3GQ6UW15 175 aa7.55□□□□□ -1.2
CDC42EP3-206ENST00000611976 LOC110117498A0A087WWA1 95 aa7.54□□□□□ -1.2
CDC42EP3-206ENST00000611976 TRBV7-6A0A0J9YX20 115 aa7.54□□□□□ -1.2
CDC42EP3-206ENST00000611976 Q6ZRU5 148 aa7.54□□□□□ -1.2
CDC42EP3-206ENST00000611976 Q6ZTC4 211 aa7.54□□□□□ -1.2
CDC42EP3-206ENST00000611976 SPATA3Q8NHX4 192 aa7.54□□□□□ -1.2
CDC42EP3-206ENST00000611976 SMR3AQ99954 134 aa7.54□□□□□ -1.2
CDC42EP3-206ENST00000611976 DSPP15924 2871 aaKnown RBP7.54□□□□□ -1.2
CDC42EP3-206ENST00000611976 SMCR5Q8TEV8 140 aa7.54□□□□□ -1.2
CDC42EP3-206ENST00000611976 USP9YO00507 2555 aaPredicted RBP7.53□□□□□ -1.2
CDC42EP3-206ENST00000611976 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
CDC42EP3-206ENST00000611976 ZNF575Q86XF7 245 aa7.53□□□□□ -1.2
CDC42EP3-206ENST00000611976 ZNF706Q9Y5V0 76 aaPredicted RBP7.53□□□□□ -1.2
CDC42EP3-206ENST00000611976 ABCA2Q9BZC7 2435 aa7.53□□□□□ -1.2
CDC42EP3-206ENST00000611976 Q6ZQT0 140 aa7.53□□□□□ -1.2
CDC42EP3-206ENST00000611976 RETNQ9HD89 108 aa7.53□□□□□ -1.2
CDC42EP3-206ENST00000611976 SPTSSBQ8NFR3 76 aa7.52□□□□□ -1.21
CDC42EP3-206ENST00000611976 X6R8D5 127 aa7.52□□□□□ -1.21
CDC42EP3-206ENST00000611976 PRR4Q16378 134 aa7.52□□□□□ -1.21
CDC42EP3-206ENST00000611976 DMXL1Q9Y485 3027 aa7.51□□□□□ -1.21
CDC42EP3-206ENST00000611976 MUC4Q99102 2169 aa7.51□□□□□ -1.21
CDC42EP3-206ENST00000611976 LINC00474Q9P2X8 69 aa7.51□□□□□ -1.21
CDC42EP3-206ENST00000611976 C10orf25Q5T742 122 aa7.51□□□□□ -1.21
CDC42EP3-206ENST00000611976 C6orf48Q9UBA6 75 aa7.51□□□□□ -1.21
CDC42EP3-206ENST00000611976 FRYQ5TBA9 3013 aa7.51□□□□□ -1.21
CDC42EP3-206ENST00000611976 PLAC8L1A1L4L8 177 aa7.51□□□□□ -1.21
CDC42EP3-206ENST00000611976 NHLRC4P0CG21 123 aaPredicted RBP7.51□□□□□ -1.21
CDC42EP3-206ENST00000611976 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
CDC42EP3-206ENST00000611976 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
CDC42EP3-206ENST00000611976 A0A1B0GW54 56 aa7.49□□□□□ -1.21
CDC42EP3-206ENST00000611976 C1orf195Q5TG92 126 aa7.49□□□□□ -1.21
CDC42EP3-206ENST00000611976 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
CDC42EP3-206ENST00000611976 ABCA12Q86UK0 2595 aa7.48□□□□□ -1.21
CDC42EP3-206ENST00000611976 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
CDC42EP3-206ENST00000611976 SETD2Q9BYW2 2564 aaPredicted RBP7.47□□□□□ -1.21
CDC42EP3-206ENST00000611976 FASNP49327 2511 aaKnown RBP7.47□□□□□ -1.21
CDC42EP3-206ENST00000611976 H3BNG1 76 aa7.47□□□□□ -1.21
CDC42EP3-206ENST00000611976 HCG22E2RYF7 251 aa7.46□□□□□ -1.21
CDC42EP3-206ENST00000611976 LINC01600Q96MT4 127 aa7.46□□□□□ -1.21
CDC42EP3-206ENST00000611976 GVQW2A0A096LPI5 108 aaPredicted RBP7.46□□□□□ -1.22
CDC42EP3-206ENST00000611976 LINC01556Q5JQF7 62 aa7.46□□□□□ -1.22
CDC42EP3-206ENST00000611976 WDFY3Q8IZQ1 3526 aa7.46□□□□□ -1.22
CDC42EP3-206ENST00000611976 LOC400499M0QZD8 3231 aa7.46□□□□□ -1.22
CDC42EP3-206ENST00000611976 KIAA0087Q14695 138 aa7.45□□□□□ -1.22
CDC42EP3-206ENST00000611976 Q8N9L7 120 aa7.45□□□□□ -1.22
CDC42EP3-206ENST00000611976 C7orf33Q8WU49 177 aa7.45□□□□□ -1.22
CDC42EP3-206ENST00000611976 DMXL2Q8TDJ6 3036 aa7.45□□□□□ -1.22
CDC42EP3-206ENST00000611976 ESRGQ1W209 222 aa7.45□□□□□ -1.22
CDC42EP3-206ENST00000611976 CASC2Q6XLA1 102 aa7.45□□□□□ -1.22
CDC42EP3-206ENST00000611976 Q9BRP9 147 aa7.45□□□□□ -1.22
CDC42EP3-206ENST00000611976 A6NED7 52 aa7.44□□□□□ -1.22
CDC42EP3-206ENST00000611976 A0A087WSZ3 146 aa7.44□□□□□ -1.22
CDC42EP3-206ENST00000611976 IGLV6-57P01721 117 aa7.44□□□□□ -1.22
CDC42EP3-206ENST00000611976 CSNK1G2-AS1Q8NCQ2 148 aa7.44□□□□□ -1.22
CDC42EP3-206ENST00000611976 CENPEQ02224 2701 aa7.44□□□□□ -1.22
CDC42EP3-206ENST00000611976 ASPMQ8IZT6 3477 aa7.44□□□□□ -1.22
CDC42EP3-206ENST00000611976 IGLV9-49A0A0B4J1Y8 123 aa7.43□□□□□ -1.22
CDC42EP3-206ENST00000611976 PRR15LQ9BU68 103 aa7.43□□□□□ -1.22
CDC42EP3-206ENST00000611976 C22orf24Q9Y442 160 aa7.43□□□□□ -1.22
CDC42EP3-206ENST00000611976 LRCOL1A6NCL2 159 aa7.43□□□□□ -1.22
CDC42EP3-206ENST00000611976 SEC61GP60059 68 aa7.43□□□□□ -1.22
CDC42EP3-206ENST00000611976 SMIM29Q86T20 159 aa7.43□□□□□ -1.22
CDC42EP3-206ENST00000611976 PRO0628Q9UI54 55 aa7.43□□□□□ -1.22
CDC42EP3-206ENST00000611976 FN1P02751 2386 aaKnown RBP7.42□□□□□ -1.22
CDC42EP3-206ENST00000611976 A0A096LNT2 108 aa7.41□□□□□ -1.22
CDC42EP3-206ENST00000611976 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
CDC42EP3-206ENST00000611976 DOPEY1Q5JWR5 2465 aa7.41□□□□□ -1.22
CDC42EP3-206ENST00000611976 H0Y9P7 68 aa7.41□□□□□ -1.22
CDC42EP3-206ENST00000611976 Q8NAQ8 132 aa7.41□□□□□ -1.22
CDC42EP3-206ENST00000611976 ANKRD17O75179 2603 aaKnown RBP7.4□□□□□ -1.23
CDC42EP3-206ENST00000611976 C4orf26Q17RF5 130 aa7.39□□□□□ -1.23
CDC42EP3-206ENST00000611976 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
CDC42EP3-206ENST00000611976 LINC00167Q96N53 147 aa7.39□□□□□ -1.23
CDC42EP3-206ENST00000611976 Q6ZRX8 168 aa7.39□□□□□ -1.23
CDC42EP3-206ENST00000611976 JMJD1CQ15652 2540 aa7.38□□□□□ -1.23
CDC42EP3-206ENST00000611976 Q8NBF4 154 aa7.38□□□□□ -1.23
CDC42EP3-206ENST00000611976 TM2D3Q9BRN9 247 aa7.38□□□□□ -1.23
CDC42EP3-206ENST00000611976 LAMA5O15230 3695 aa7.38□□□□□ -1.23
CDC42EP3-206ENST00000611976 VPREB1P12018 145 aa7.38□□□□□ -1.23
CDC42EP3-206ENST00000611976 MAP1AP78559 2803 aaPredicted RBP7.37□□□□□ -1.23
CDC42EP3-206ENST00000611976 GIG44P09565 113 aaPredicted RBP7.37□□□□□ -1.23
CDC42EP3-206ENST00000611976 PRLHP81277 87 aa7.37□□□□□ -1.23
CDC42EP3-206ENST00000611976 ERC2-IT1O76042 136 aa7.37□□□□□ -1.23
CDC42EP3-206ENST00000611976 DEFB116Q30KQ4 102 aa7.37□□□□□ -1.23
CDC42EP3-206ENST00000611976 MTORP42345 2549 aa7.36□□□□□ -1.23
CDC42EP3-206ENST00000611976 LINC00612Q8N6U2 182 aa7.36□□□□□ -1.23
CDC42EP3-206ENST00000611976 ACANP16112 2415 aa7.36□□□□□ -1.23
CDC42EP3-206ENST00000611976 PSPHP1O15172 72 aa7.36□□□□□ -1.23
CDC42EP3-206ENST00000611976 C19orf73Q9NVV2 129 aa7.35□□□□□ -1.23
CDC42EP3-206ENST00000611976 NUPR2A6NF83 97 aa7.35□□□□□ -1.23
CDC42EP3-206ENST00000611976 M0R2N4 97 aa7.34□□□□□ -1.23
CDC42EP3-206ENST00000611976 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.23
CDC42EP3-206ENST00000611976 PMAIP1Q13794 54 aa7.33□□□□□ -1.24
CDC42EP3-206ENST00000611976 PRR34Q9NV39 138 aa7.33□□□□□ -1.24
CDC42EP3-206ENST00000611976 FAM104AQ969W3 186 aa7.33□□□□□ -1.24
CDC42EP3-206ENST00000611976 KLKP1Q107X0 134 aa7.32□□□□□ -1.24
CDC42EP3-206ENST00000611976 NBEAQ8NFP9 2946 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms