RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 TSTD3H0UI37 97 aa8.31□□□□□ -1.08
MUC1-222ENST00000610468 SCGB1D1O95968 90 aa8.31□□□□□ -1.08
MUC1-222ENST00000610468 Q8IZM0 81 aa8.31□□□□□ -1.08
MUC1-222ENST00000610468 LINC00469Q8N7U9 141 aa8.31□□□□□ -1.08
MUC1-222ENST00000610468 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
MUC1-222ENST00000610468 KRTDAPP60985 99 aa8.3□□□□□ -1.08
MUC1-222ENST00000610468 PET117Q6UWS5 81 aa8.3□□□□□ -1.08
MUC1-222ENST00000610468 F8VRH5 84 aa8.29□□□□□ -1.08
MUC1-222ENST00000610468 SPINK8P0C7L1 97 aa8.29□□□□□ -1.08
MUC1-222ENST00000610468 CHTOPQ9Y3Y2 248 aaKnown RBP8.29□□□□□ -1.08
MUC1-222ENST00000610468 ZNF861PO60384 105 aa8.28□□□□□ -1.08
MUC1-222ENST00000610468 C3orf79P0CE67 100 aa8.28□□□□□ -1.08
MUC1-222ENST00000610468 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
MUC1-222ENST00000610468 SYS1-DBNDD2H3BUS1 97 aa8.27□□□□□ -1.09
MUC1-222ENST00000610468 PRR4Q16378 134 aa8.26□□□□□ -1.09
MUC1-222ENST00000610468 VAMP8Q9BV40 100 aa8.26□□□□□ -1.09
MUC1-222ENST00000610468 C22orf24Q9Y442 160 aa8.26□□□□□ -1.09
MUC1-222ENST00000610468 PRSS2P07478 247 aa8.25□□□□□ -1.09
MUC1-222ENST00000610468 CKS1BP61024 79 aa8.25□□□□□ -1.09
MUC1-222ENST00000610468 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
MUC1-222ENST00000610468 C6orf226Q5I0X4 101 aa8.24□□□□□ -1.09
MUC1-222ENST00000610468 LINC01545Q5VT33 79 aa8.24□□□□□ -1.09
MUC1-222ENST00000610468 ZNF625Q96I27 306 aaPredicted RBP8.24□□□□□ -1.09
MUC1-222ENST00000610468 PMCHL2Q9BQD1 86 aa8.24□□□□□ -1.09
MUC1-222ENST00000610468 TOMM7Q9P0U1 55 aa8.24□□□□□ -1.09
MUC1-222ENST00000610468 TP73-AS1Q9UF72 201 aa8.24□□□□□ -1.09
MUC1-222ENST00000610468 HSBP1L1C9JCN9 74 aa8.23□□□□□ -1.09
MUC1-222ENST00000610468 H3BRM9 83 aa8.23□□□□□ -1.09
MUC1-222ENST00000610468 LBHQ53QV2 105 aaPredicted RBP8.23□□□□□ -1.09
MUC1-222ENST00000610468 XAGE1AQ9HD64 81 aa8.23□□□□□ -1.09
MUC1-222ENST00000610468 TMEM170BQ5T4T1 132 aa8.22□□□□□ -1.09
MUC1-222ENST00000610468 A0A087X002 238 aa8.21□□□□□ -1.1
MUC1-222ENST00000610468 CXCL5P42830 114 aa8.21□□□□□ -1.1
MUC1-222ENST00000610468 TSPEAR-AS2P59090 65 aa8.21□□□□□ -1.1
MUC1-222ENST00000610468 MRPL55Q7Z7F7 128 aaKnown RBP8.21□□□□□ -1.1
MUC1-222ENST00000610468 H0Y8G0 127 aa8.2□□□□□ -1.1
MUC1-222ENST00000610468 BCE1O60756 84 aa8.2□□□□□ -1.1
MUC1-222ENST00000610468 PLNP26678 52 aa8.19□□□□□ -1.1
MUC1-222ENST00000610468 RPL28P46779 137 aaKnown RBP8.19□□□□□ -1.1
MUC1-222ENST00000610468 DPM2O94777 84 aa8.18□□□□□ -1.1
MUC1-222ENST00000610468 DDTP30046 118 aa8.18□□□□□ -1.1
MUC1-222ENST00000610468 A0A0U1RQV1 116 aa8.17□□□□□ -1.1
MUC1-222ENST00000610468 PCP4L1A6NKN8 68 aa8.17□□□□□ -1.1
MUC1-222ENST00000610468 TSPAN13O95857 204 aa8.17□□□□□ -1.1
MUC1-222ENST00000610468 IGKCP01834 107 aa8.17□□□□□ -1.1
MUC1-222ENST00000610468 CRYGAP11844 174 aa8.17□□□□□ -1.1
MUC1-222ENST00000610468 UQCR10Q9UDW1 63 aa8.17□□□□□ -1.1
MUC1-222ENST00000610468 SPATA45Q537H7 98 aa8.16□□□□□ -1.1
MUC1-222ENST00000610468 KRTAP13-1Q8IUC0 172 aa8.16□□□□□ -1.1
MUC1-222ENST00000610468 MIEN1Q9BRT3 115 aa8.16□□□□□ -1.1
MUC1-222ENST00000610468 PAM16Q9Y3D7 125 aa8.16□□□□□ -1.1
MUC1-222ENST00000610468 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
MUC1-222ENST00000610468 Q8NDZ9 215 aa8.15□□□□□ -1.1
MUC1-222ENST00000610468 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.1
MUC1-222ENST00000610468 LINC00167Q96N53 147 aa8.15□□□□□ -1.1
MUC1-222ENST00000610468 LEPROTO15243 131 aa8.14□□□□□ -1.11
MUC1-222ENST00000610468 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
MUC1-222ENST00000610468 E9PLD3 99 aa8.13□□□□□ -1.11
MUC1-222ENST00000610468 ERG28Q9UKR5 140 aa8.13□□□□□ -1.11
MUC1-222ENST00000610468 IGKV2D-26A0A0A0MRZ7 120 aa8.12□□□□□ -1.11
MUC1-222ENST00000610468 KRTAP13-2Q52LG2 175 aa8.12□□□□□ -1.11
MUC1-222ENST00000610468 GAGE10A6NGK3 116 aa8.11□□□□□ -1.11
MUC1-222ENST00000610468 J3QQQ9 107 aa8.11□□□□□ -1.11
MUC1-222ENST00000610468 DLEU1O43261 78 aa8.11□□□□□ -1.11
MUC1-222ENST00000610468 COX17Q14061 63 aa8.11□□□□□ -1.11
MUC1-222ENST00000610468 FAM229BQ4G0N7 80 aa8.11□□□□□ -1.11
MUC1-222ENST00000610468 ANAPC11Q9NYG5 84 aa8.11□□□□□ -1.11
MUC1-222ENST00000610468 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
MUC1-222ENST00000610468 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
MUC1-222ENST00000610468 SLC25A34Q6PIV7 304 aa8.1□□□□□ -1.11
MUC1-222ENST00000610468 SFTA2Q6UW10 78 aa8.1□□□□□ -1.11
MUC1-222ENST00000610468 ATOH7Q8N100 152 aa8.1□□□□□ -1.11
MUC1-222ENST00000610468 PLEKHB2Q96CS7 222 aa8.1□□□□□ -1.11
MUC1-222ENST00000610468 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
MUC1-222ENST00000610468 PRO1933Q9H354 126 aa8.1□□□□□ -1.11
MUC1-222ENST00000610468 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
MUC1-222ENST00000610468 PFN2P35080 140 aa8.09□□□□□ -1.11
MUC1-222ENST00000610468 ANKRD39Q53RE8 183 aa8.09□□□□□ -1.11
MUC1-222ENST00000610468 LINC00587B1AMM8 73 aa8.08□□□□□ -1.12
MUC1-222ENST00000610468 SMIM13P0DJ93 91 aa8.08□□□□□ -1.12
MUC1-222ENST00000610468 COX8AP10176 69 aa8.08□□□□□ -1.12
MUC1-222ENST00000610468 VPREB1P12018 145 aa8.08□□□□□ -1.12
MUC1-222ENST00000610468 UBE2AP49459 152 aa8.08□□□□□ -1.12
MUC1-222ENST00000610468 NKAPP1Q8N9T2 125 aa8.08□□□□□ -1.12
MUC1-222ENST00000610468 TTTY13Q9BZ97 58 aa8.08□□□□□ -1.12
MUC1-222ENST00000610468 FAT4Q6V0I7 4981 aa8.07□□□□□ -1.12
MUC1-222ENST00000610468 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
MUC1-222ENST00000610468 HERVK_113P61574 105 aa8.07□□□□□ -1.12
MUC1-222ENST00000610468 HERV-K104P63124 156 aa8.07□□□□□ -1.12
MUC1-222ENST00000610468 CTAG1AP78358 180 aa8.07□□□□□ -1.12
MUC1-222ENST00000610468 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
MUC1-222ENST00000610468 LINC00304Q8N9R0 145 aa8.07□□□□□ -1.12
MUC1-222ENST00000610468 LITAFQ99732 161 aa8.07□□□□□ -1.12
MUC1-222ENST00000610468 MYMXA0A1B0GTQ4 84 aa8.06□□□□□ -1.12
MUC1-222ENST00000610468 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
MUC1-222ENST00000610468 NMUP48645 174 aa8.06□□□□□ -1.12
MUC1-222ENST00000610468 TPRXLQ17RH7 258 aa8.06□□□□□ -1.12
MUC1-222ENST00000610468 ADAMTSL4-AS1Q5T5F5 129 aa8.06□□□□□ -1.12
MUC1-222ENST00000610468 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
MUC1-222ENST00000610468 A0A0J9YXY3 114 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms