RNA–Protein interactions for RNA: ENST00000610023.1

PDE4C-217, Transcript of phosphodiesterase 4C, humanhuman

TSL 4

Gene PDE4C, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-217ENST00000610023 HIST1H2BOP23527 126 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 HIST1H2BBP33778 126 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 RPL28P46779 137 aaKnown RBP12.85□□□□□ -0.35
PDE4C-217ENST00000610023 HIST1H2BDP58876 126 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 HIST1H2BCP62807 126 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 HIST2H2BEQ16778 126 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 MEIG1Q5JSS6 88 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.85□□□□□ -0.35
PDE4C-217ENST00000610023 HIST1H2BHQ93079 126 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 HIST1H2BNQ99877 126 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 HIST1H2BMQ99879 126 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 NDUFA12Q9UI09 145 aa12.85□□□□□ -0.35
PDE4C-217ENST00000610023 IGKV2-28A0A075B6P5 120 aa12.84□□□□□ -0.35
PDE4C-217ENST00000610023 IGKV2D-28P01615 120 aa12.84□□□□□ -0.35
PDE4C-217ENST00000610023 KRTAP1-4P0C5Y4 121 aa12.84□□□□□ -0.35
PDE4C-217ENST00000610023 HERVK_113P61574 105 aa12.83□□□□□ -0.36
PDE4C-217ENST00000610023 PRR26Q8N8Z3 221 aa12.83□□□□□ -0.36
PDE4C-217ENST00000610023 PMCHL2Q9BQD1 86 aa12.83□□□□□ -0.36
PDE4C-217ENST00000610023 MAP1LC3CQ9BXW4 147 aa12.83□□□□□ -0.36
PDE4C-217ENST00000610023 IGLV1-50A0A075B6I6 118 aa12.82□□□□□ -0.36
PDE4C-217ENST00000610023 MYMXA0A1B0GTQ4 84 aa12.82□□□□□ -0.36
PDE4C-217ENST00000610023 LEPROTO15243 131 aa12.82□□□□□ -0.36
PDE4C-217ENST00000610023 IGKCP01834 107 aa12.82□□□□□ -0.36
PDE4C-217ENST00000610023 SMIM13P0DJ93 91 aa12.82□□□□□ -0.36
PDE4C-217ENST00000610023 Q8NDZ9 215 aa12.82□□□□□ -0.36
PDE4C-217ENST00000610023 PLEKHB2Q96CS7 222 aa12.82□□□□□ -0.36
PDE4C-217ENST00000610023 ATP6V1G1O75348 118 aa12.81□□□□□ -0.36
PDE4C-217ENST00000610023 TSPEAR-AS2P59090 65 aa12.81□□□□□ -0.36
PDE4C-217ENST00000610023 LINC00587B1AMM8 73 aa12.8□□□□□ -0.36
PDE4C-217ENST00000610023 UBE2AP49459 152 aa12.79□□□□□ -0.36
PDE4C-217ENST00000610023 MIR7-3HGQ8N6C7 128 aa12.78□□□□□ -0.36
PDE4C-217ENST00000610023 J3QQQ9 107 aa12.77□□□□□ -0.37
PDE4C-217ENST00000610023 RPL13AP40429 203 aaKnown RBP12.76□□□□□ -0.37
PDE4C-217ENST00000610023 KRTAP13-1Q8IUC0 172 aa12.76□□□□□ -0.37
PDE4C-217ENST00000610023 TMEM126AQ9H061 195 aa12.76□□□□□ -0.37
PDE4C-217ENST00000610023 LGALS3P17931 250 aaKnown RBP12.75□□□□□ -0.37
PDE4C-217ENST00000610023 NMUP48645 174 aa12.75□□□□□ -0.37
PDE4C-217ENST00000610023 TMEM238C9JI98 176 aa12.74□□□□□ -0.37
PDE4C-217ENST00000610023 SYS1-DBNDD2H3BUS1 97 aa12.74□□□□□ -0.37
PDE4C-217ENST00000610023 BOD1L2Q8IYS8 172 aa12.74□□□□□ -0.37
PDE4C-217ENST00000610023 M0R378 163 aa12.73□□□□□ -0.37
PDE4C-217ENST00000610023 FAM19A1Q7Z5A9 133 aa12.72□□□□□ -0.37
PDE4C-217ENST00000610023 NCR3O14931 201 aa12.71□□□□□ -0.37
PDE4C-217ENST00000610023 PRLHP81277 87 aa12.71□□□□□ -0.37
PDE4C-217ENST00000610023 E9PLD3 99 aa12.69□□□□□ -0.38
PDE4C-217ENST00000610023 COA6Q5JTJ3 125 aaKnown RBP12.69□□□□□ -0.38
PDE4C-217ENST00000610023 LINC01545Q5VT33 79 aa12.69□□□□□ -0.38
PDE4C-217ENST00000610023 IGKV2D-26A0A0A0MRZ7 120 aa12.68□□□□□ -0.38
PDE4C-217ENST00000610023 PET117Q6UWS5 81 aa12.68□□□□□ -0.38
PDE4C-217ENST00000610023 DAND5Q8N907 189 aa12.68□□□□□ -0.38
PDE4C-217ENST00000610023 PRYO14603 147 aa12.66□□□□□ -0.38
PDE4C-217ENST00000610023 A0A087X002 238 aa12.65□□□□□ -0.38
PDE4C-217ENST00000610023 CRYGAP11844 174 aa12.65□□□□□ -0.38
PDE4C-217ENST00000610023 MIEN1Q9BRT3 115 aa12.65□□□□□ -0.38
PDE4C-217ENST00000610023 LOC107984156A0A0G2JMH3 177 aa12.64□□□□□ -0.39
PDE4C-217ENST00000610023 C3orf79P0CE67 100 aa12.64□□□□□ -0.39
PDE4C-217ENST00000610023 ARL17AQ8IVW1 177 aa12.64□□□□□ -0.39
PDE4C-217ENST00000610023 A0A0J9YXY3 114 aa12.62□□□□□ -0.39
PDE4C-217ENST00000610023 KRTDAPP60985 99 aa12.61□□□□□ -0.39
PDE4C-217ENST00000610023 HIGD2AQ9BW72 106 aa12.61□□□□□ -0.39
PDE4C-217ENST00000610023 ANAPC11Q9NYG5 84 aa12.61□□□□□ -0.39
PDE4C-217ENST00000610023 LRP2P98164 4655 aa12.61□□□□□ -0.39
PDE4C-217ENST00000610023 TRBV10-3A0A0K0K1G6 114 aa12.6□□□□□ -0.39
PDE4C-217ENST00000610023 FAM229BQ4G0N7 80 aa12.6□□□□□ -0.39
PDE4C-217ENST00000610023 TYMSOSQ8TAI1 123 aa12.6□□□□□ -0.39
PDE4C-217ENST00000610023 KCNQ1DNQ9H478 68 aa12.6□□□□□ -0.39
PDE4C-217ENST00000610023 SPANXB1Q9NS25 103 aaPredicted RBP12.6□□□□□ -0.39
PDE4C-217ENST00000610023 UBR4Q5T4S7 5183 aa12.59□□□□□ -0.39
PDE4C-217ENST00000610023 TRBV10-2A0A0K0K1G8 114 aa12.59□□□□□ -0.39
PDE4C-217ENST00000610023 S100A1P23297 94 aa12.59□□□□□ -0.39
PDE4C-217ENST00000610023 S100A12P80511 92 aa12.59□□□□□ -0.39
PDE4C-217ENST00000610023 C20orf202A1L168 122 aa12.58□□□□□ -0.4
PDE4C-217ENST00000610023 SPRR1AP35321 89 aa12.58□□□□□ -0.4
PDE4C-217ENST00000610023 LINC00337Q8N6G1 96 aa12.58□□□□□ -0.4
PDE4C-217ENST00000610023 ETDCA0A1B0GVM5 59 aa12.57□□□□□ -0.4
PDE4C-217ENST00000610023 NDUFC2O95298 119 aa12.57□□□□□ -0.4
PDE4C-217ENST00000610023 DDTP30046 118 aa12.57□□□□□ -0.4
PDE4C-217ENST00000610023 NPC2P61916 151 aa12.57□□□□□ -0.4
PDE4C-217ENST00000610023 ZNF815PA8K554 130 aa12.55□□□□□ -0.4
PDE4C-217ENST00000610023 KRTAP13-2Q52LG2 175 aa12.55□□□□□ -0.4
PDE4C-217ENST00000610023 ADAMTSL4-AS1Q5T5F5 129 aa12.55□□□□□ -0.4
PDE4C-217ENST00000610023 SOSTDC1Q6X4U4 206 aa12.55□□□□□ -0.4
PDE4C-217ENST00000610023 KRTAP4-16G5E9R7 235 aaPredicted RBP12.53□□□□□ -0.4
PDE4C-217ENST00000610023 TIMM17BO60830 172 aa12.53□□□□□ -0.4
PDE4C-217ENST00000610023 S100A7L2Q5SY68 101 aa12.52□□□□□ -0.41
PDE4C-217ENST00000610023 LITAFQ99732 161 aa12.52□□□□□ -0.41
PDE4C-217ENST00000610023 ZNF706Q9Y5V0 76 aaPredicted RBP12.52□□□□□ -0.41
PDE4C-217ENST00000610023 EIF4EBP3O60516 100 aaPredicted RBP12.51□□□□□ -0.41
PDE4C-217ENST00000610023 TTTY13Q9BZ97 58 aa12.51□□□□□ -0.41
PDE4C-217ENST00000610023 SPRR4Q96PI1 79 aa12.5□□□□□ -0.41
PDE4C-217ENST00000610023 IGLV6-57P01721 117 aa12.49□□□□□ -0.41
PDE4C-217ENST00000610023 AKR1D1P51857 326 aa12.49□□□□□ -0.41
PDE4C-217ENST00000610023 LINC00308Q8TCZ7 52 aa12.49□□□□□ -0.41
PDE4C-217ENST00000610023 TSPAN13O95857 204 aa12.48□□□□□ -0.41
PDE4C-217ENST00000610023 SPANXCQ9NY87 97 aa12.48□□□□□ -0.41
PDE4C-217ENST00000610023 TRAV23DV6A0A075B6W5 121 aa12.47□□□□□ -0.41
PDE4C-217ENST00000610023 B5MCH6 92 aa12.47□□□□□ -0.41
PDE4C-217ENST00000610023 ATOH7Q8N100 152 aa12.47□□□□□ -0.41
PDE4C-217ENST00000610023 SMCR5Q8TEV8 140 aa12.47□□□□□ -0.41
PDE4C-217ENST00000610023 ANKRD39Q53RE8 183 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms