RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 C3orf22Q8N5N4 141 aa7.71□□□□□ -1.18
POLR2J3-219ENST00000608621 LINC00614P0C842 121 aa7.7□□□□□ -1.18
POLR2J3-219ENST00000608621 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
POLR2J3-219ENST00000608621 C11orf86A6NJI1 115 aa7.69□□□□□ -1.18
POLR2J3-219ENST00000608621 IFITM2Q01629 132 aa7.69□□□□□ -1.18
POLR2J3-219ENST00000608621 PMCHL1Q16048 86 aa7.69□□□□□ -1.18
POLR2J3-219ENST00000608621 TMEM170BQ5T4T1 132 aa7.69□□□□□ -1.18
POLR2J3-219ENST00000608621 BAGE3Q86Y29 109 aa7.69□□□□□ -1.18
POLR2J3-219ENST00000608621 C18orf32Q8TCD1 76 aa7.69□□□□□ -1.18
POLR2J3-219ENST00000608621 HIGD2AQ9BW72 106 aa7.69□□□□□ -1.18
POLR2J3-219ENST00000608621 RPS10P5Q9NQ39 176 aa7.69□□□□□ -1.18
POLR2J3-219ENST00000608621 FAT4Q6V0I7 4981 aa7.68□□□□□ -1.18
POLR2J3-219ENST00000608621 HBDP02042 147 aa7.68□□□□□ -1.18
POLR2J3-219ENST00000608621 LINC00158P58513 81 aa7.68□□□□□ -1.18
POLR2J3-219ENST00000608621 PPDPFQ9H3Y8 114 aa7.67□□□□□ -1.18
POLR2J3-219ENST00000608621 TRAPPC1Q9Y5R8 145 aa7.67□□□□□ -1.18
POLR2J3-219ENST00000608621 A0A0U1RRA0 63 aa7.66□□□□□ -1.18
POLR2J3-219ENST00000608621 SFTA2Q6UW10 78 aa7.66□□□□□ -1.18
POLR2J3-219ENST00000608621 C10orf91Q5T1B1 145 aa7.65□□□□□ -1.18
POLR2J3-219ENST00000608621 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
POLR2J3-219ENST00000608621 SPRR4Q96PI1 79 aa7.65□□□□□ -1.18
POLR2J3-219ENST00000608621 CHTOPQ9Y3Y2 248 aaKnown RBP7.65□□□□□ -1.18
POLR2J3-219ENST00000608621 RHEBQ15382 184 aa7.64□□□□□ -1.19
POLR2J3-219ENST00000608621 COMMD7Q86VX2 200 aa7.64□□□□□ -1.19
POLR2J3-219ENST00000608621 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
POLR2J3-219ENST00000608621 TMEM223A0PJW6 202 aa7.62□□□□□ -1.19
POLR2J3-219ENST00000608621 SMIM13P0DJ93 91 aa7.62□□□□□ -1.19
POLR2J3-219ENST00000608621 ATP6V1G1O75348 118 aa7.61□□□□□ -1.19
POLR2J3-219ENST00000608621 DAND5Q8N907 189 aa7.61□□□□□ -1.19
POLR2J3-219ENST00000608621 SMCR5Q8TEV8 140 aa7.61□□□□□ -1.19
POLR2J3-219ENST00000608621 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
POLR2J3-219ENST00000608621 PRYO14603 147 aa7.6□□□□□ -1.19
POLR2J3-219ENST00000608621 BOD1L2Q8IYS8 172 aa7.6□□□□□ -1.19
POLR2J3-219ENST00000608621 NCR3O14931 201 aa7.59□□□□□ -1.19
POLR2J3-219ENST00000608621 MEIG1Q5JSS6 88 aa7.59□□□□□ -1.19
POLR2J3-219ENST00000608621 FP248Q71RG6 208 aaPredicted RBP7.59□□□□□ -1.19
POLR2J3-219ENST00000608621 LINC00337Q8N6G1 96 aa7.59□□□□□ -1.19
POLR2J3-219ENST00000608621 Q8NBF4 154 aa7.59□□□□□ -1.19
POLR2J3-219ENST00000608621 TRAV12-1A0A0B4J245 112 aa7.58□□□□□ -1.2
POLR2J3-219ENST00000608621 SPRR1AP35321 89 aa7.58□□□□□ -1.2
POLR2J3-219ENST00000608621 MIR7-3HGQ8N6C7 128 aa7.58□□□□□ -1.2
POLR2J3-219ENST00000608621 KCNQ1DNQ9H478 68 aa7.58□□□□□ -1.2
POLR2J3-219ENST00000608621 ETDCA0A1B0GVM5 59 aa7.57□□□□□ -1.2
POLR2J3-219ENST00000608621 KRTAP4-16G5E9R7 235 aaPredicted RBP7.57□□□□□ -1.2
POLR2J3-219ENST00000608621 IFI27L1Q96BM0 104 aa7.57□□□□□ -1.2
POLR2J3-219ENST00000608621 TRBV10-3A0A0K0K1G6 114 aa7.56□□□□□ -1.2
POLR2J3-219ENST00000608621 HERV-K104P63124 156 aa7.56□□□□□ -1.2
POLR2J3-219ENST00000608621 KRTAP13-3Q3SY46 172 aa7.56□□□□□ -1.2
POLR2J3-219ENST00000608621 SPINK1P00995 79 aa7.55□□□□□ -1.2
POLR2J3-219ENST00000608621 APOC3P02656 99 aa7.55□□□□□ -1.2
POLR2J3-219ENST00000608621 CHCHD1Q96BP2 118 aaKnown RBP7.55□□□□□ -1.2
POLR2J3-219ENST00000608621 LINC00587B1AMM8 73 aa7.54□□□□□ -1.2
POLR2J3-219ENST00000608621 GAGE2AQ6NT46 116 aa7.54□□□□□ -1.2
POLR2J3-219ENST00000608621 NDUFA12Q9UI09 145 aa7.54□□□□□ -1.2
POLR2J3-219ENST00000608621 ASB16-AS1Q495Z4 193 aa7.53□□□□□ -1.2
POLR2J3-219ENST00000608621 LINC00483Q53H64 154 aa7.53□□□□□ -1.2
POLR2J3-219ENST00000608621 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
POLR2J3-219ENST00000608621 MYMXA0A1B0GTQ4 84 aa7.52□□□□□ -1.21
POLR2J3-219ENST00000608621 B5MCH6 92 aa7.52□□□□□ -1.21
POLR2J3-219ENST00000608621 ERC2-IT1O76042 136 aa7.52□□□□□ -1.21
POLR2J3-219ENST00000608621 SNAPINO95295 136 aa7.52□□□□□ -1.21
POLR2J3-219ENST00000608621 S100A12P80511 92 aa7.52□□□□□ -1.21
POLR2J3-219ENST00000608621 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.21
POLR2J3-219ENST00000608621 MAP1LC3CQ9BXW4 147 aa7.52□□□□□ -1.21
POLR2J3-219ENST00000608621 IGLV9-49A0A0B4J1Y8 123 aa7.51□□□□□ -1.21
POLR2J3-219ENST00000608621 SSBP3-AS1Q7Z2R9 100 aa7.51□□□□□ -1.21
POLR2J3-219ENST00000608621 DDTP30046 118 aa7.5□□□□□ -1.21
POLR2J3-219ENST00000608621 MOBPQ13875 183 aa7.5□□□□□ -1.21
POLR2J3-219ENST00000608621 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
POLR2J3-219ENST00000608621 LOC107984156A0A0G2JMH3 177 aa7.49□□□□□ -1.21
POLR2J3-219ENST00000608621 H0Y8G0 127 aa7.49□□□□□ -1.21
POLR2J3-219ENST00000608621 HSBP1O75506 76 aa7.49□□□□□ -1.21
POLR2J3-219ENST00000608621 ARL17AQ8IVW1 177 aa7.49□□□□□ -1.21
POLR2J3-219ENST00000608621 SVBPQ8N300 66 aa7.49□□□□□ -1.21
POLR2J3-219ENST00000608621 YPEL4Q96NS1 127 aa7.49□□□□□ -1.21
POLR2J3-219ENST00000608621 LEPROTO15243 131 aa7.48□□□□□ -1.21
POLR2J3-219ENST00000608621 TSPEAR-AS2P59090 65 aa7.48□□□□□ -1.21
POLR2J3-219ENST00000608621 SEC61BP60468 96 aaKnown RBP7.48□□□□□ -1.21
POLR2J3-219ENST00000608621 NDUFA5Q16718 116 aa7.48□□□□□ -1.21
POLR2J3-219ENST00000608621 Q8N377 158 aa7.48□□□□□ -1.21
POLR2J3-219ENST00000608621 Q9BRP9 147 aa7.48□□□□□ -1.21
POLR2J3-219ENST00000608621 TRBV10-2A0A0K0K1G8 114 aa7.47□□□□□ -1.21
POLR2J3-219ENST00000608621 LINC01547P58512 204 aaPredicted RBP7.47□□□□□ -1.21
POLR2J3-219ENST00000608621 RPS29P62273 56 aaKnown RBP7.47□□□□□ -1.21
POLR2J3-219ENST00000608621 Q6ZRX8 168 aa7.46□□□□□ -1.22
POLR2J3-219ENST00000608621 J3QQQ9 107 aa7.45□□□□□ -1.22
POLR2J3-219ENST00000608621 SLC25A20O43772 301 aa7.45□□□□□ -1.22
POLR2J3-219ENST00000608621 LCE2BO14633 110 aa7.44□□□□□ -1.22
POLR2J3-219ENST00000608621 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
POLR2J3-219ENST00000608621 S100A7L2Q5SY68 101 aa7.44□□□□□ -1.22
POLR2J3-219ENST00000608621 MIEN1Q9BRT3 115 aa7.44□□□□□ -1.22
POLR2J3-219ENST00000608621 SPANXB1Q9NS25 103 aaPredicted RBP7.44□□□□□ -1.22
POLR2J3-219ENST00000608621 NDUFC2O95298 119 aa7.43□□□□□ -1.22
POLR2J3-219ENST00000608621 IGLV6-57P01721 117 aa7.43□□□□□ -1.22
POLR2J3-219ENST00000608621 TRGC2P03986 189 aa7.42□□□□□ -1.22
POLR2J3-219ENST00000608621 PLNP26678 52 aa7.42□□□□□ -1.22
POLR2J3-219ENST00000608621 TRAV23DV6A0A075B6W5 121 aa7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 SERF1AO75920 110 aa7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 DPM2O94777 84 aa7.41□□□□□ -1.22
POLR2J3-219ENST00000608621 LGALS3P17931 250 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms