RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 FAM19A2Q8N3H0 131 aa8.78□□□□□ -1
CTSA-216ENST00000607212 NKAPP1Q8N9T2 125 aa8.78□□□□□ -1
CTSA-216ENST00000607212 LINC00167Q96N53 147 aa8.78□□□□□ -1
CTSA-216ENST00000607212 KRTDAPP60985 99 aa8.77□□□□□ -1.01
CTSA-216ENST00000607212 COX7B2Q8TF08 81 aa8.77□□□□□ -1.01
CTSA-216ENST00000607212 SCGB3A1Q96QR1 104 aa8.77□□□□□ -1.01
CTSA-216ENST00000607212 ANAPC11Q9NYG5 84 aa8.77□□□□□ -1.01
CTSA-216ENST00000607212 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
CTSA-216ENST00000607212 TIMM17AQ99595 171 aa8.76□□□□□ -1.01
CTSA-216ENST00000607212 HSBP1O75506 76 aa8.75□□□□□ -1.01
CTSA-216ENST00000607212 TOMM6Q96B49 74 aa8.75□□□□□ -1.01
CTSA-216ENST00000607212 SMIM1B2RUZ4 78 aa8.74□□□□□ -1.01
CTSA-216ENST00000607212 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
CTSA-216ENST00000607212 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
CTSA-216ENST00000607212 RETNLBQ9BQ08 111 aa8.74□□□□□ -1.01
CTSA-216ENST00000607212 VAMP8Q9BV40 100 aa8.73□□□□□ -1.01
CTSA-216ENST00000607212 IGKV2-28A0A075B6P5 120 aa8.72□□□□□ -1.01
CTSA-216ENST00000607212 IGKV2D-28P01615 120 aa8.72□□□□□ -1.01
CTSA-216ENST00000607212 ERASQ7Z444 233 aa8.72□□□□□ -1.01
CTSA-216ENST00000607212 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
CTSA-216ENST00000607212 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
CTSA-216ENST00000607212 IGKV2D-26A0A0A0MRZ7 120 aa8.71□□□□□ -1.02
CTSA-216ENST00000607212 TINCRA0A1B0GVN0 87 aa8.71□□□□□ -1.02
CTSA-216ENST00000607212 ATP5LO75964 103 aa8.71□□□□□ -1.02
CTSA-216ENST00000607212 LINC00614P0C842 121 aa8.71□□□□□ -1.02
CTSA-216ENST00000607212 PAM16Q9Y3D7 125 aa8.71□□□□□ -1.02
CTSA-216ENST00000607212 H3BRM9 83 aa8.7□□□□□ -1.02
CTSA-216ENST00000607212 CDIP1Q9H305 208 aa8.7□□□□□ -1.02
CTSA-216ENST00000607212 MUC2Q02817 5179 aa8.7□□□□□ -1.02
CTSA-216ENST00000607212 PFN2P35080 140 aa8.69□□□□□ -1.02
CTSA-216ENST00000607212 PMCHL1Q16048 86 aa8.69□□□□□ -1.02
CTSA-216ENST00000607212 KRTAP13-2Q52LG2 175 aa8.69□□□□□ -1.02
CTSA-216ENST00000607212 FAM19A1Q7Z5A9 133 aa8.69□□□□□ -1.02
CTSA-216ENST00000607212 SNHG12Q9BXW3 62 aa8.69□□□□□ -1.02
CTSA-216ENST00000607212 A0A1B0GV90 55 aa8.68□□□□□ -1.02
CTSA-216ENST00000607212 PRLHP81277 87 aa8.68□□□□□ -1.02
CTSA-216ENST00000607212 SPATA45Q537H7 98 aa8.68□□□□□ -1.02
CTSA-216ENST00000607212 IGLV5-37A0A075B6J1 123 aa8.67□□□□□ -1.02
CTSA-216ENST00000607212 M0R143 59 aa8.67□□□□□ -1.02
CTSA-216ENST00000607212 PMVKQ15126 192 aa8.67□□□□□ -1.02
CTSA-216ENST00000607212 FAM229BQ4G0N7 80 aa8.67□□□□□ -1.02
CTSA-216ENST00000607212 KRTAP9-2Q9BYQ4 174 aa8.67□□□□□ -1.02
CTSA-216ENST00000607212 CST9LQ9H4G1 147 aa8.67□□□□□ -1.02
CTSA-216ENST00000607212 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
CTSA-216ENST00000607212 LINC01549A6NIU2 74 aa8.66□□□□□ -1.02
CTSA-216ENST00000607212 SYS1-DBNDD2H3BUS1 97 aa8.66□□□□□ -1.02
CTSA-216ENST00000607212 IGLC3P0DOY3 106 aa8.66□□□□□ -1.02
CTSA-216ENST00000607212 FA2HQ7L5A8 372 aa8.66□□□□□ -1.02
CTSA-216ENST00000607212 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.02
CTSA-216ENST00000607212 LEPROTL1O95214 131 aa8.65□□□□□ -1.02
CTSA-216ENST00000607212 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
CTSA-216ENST00000607212 C20orf202A1L168 122 aa8.64□□□□□ -1.03
CTSA-216ENST00000607212 RPL24P83731 157 aaKnown RBP8.64□□□□□ -1.03
CTSA-216ENST00000607212 PET117Q6UWS5 81 aa8.64□□□□□ -1.03
CTSA-216ENST00000607212 KRTAP13-1Q8IUC0 172 aa8.64□□□□□ -1.03
CTSA-216ENST00000607212 UQCR10Q9UDW1 63 aa8.64□□□□□ -1.03
CTSA-216ENST00000607212 A0A096LNJ9 63 aa8.63□□□□□ -1.03
CTSA-216ENST00000607212 TMEM238C9JI98 176 aa8.63□□□□□ -1.03
CTSA-216ENST00000607212 HSPB8Q9UJY1 196 aa8.63□□□□□ -1.03
CTSA-216ENST00000607212 LINC01546A6NGU7 62 aa8.62□□□□□ -1.03
CTSA-216ENST00000607212 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
CTSA-216ENST00000607212 MAP1LC3CQ9BXW4 147 aa8.62□□□□□ -1.03
CTSA-216ENST00000607212 TMEM126AQ9H061 195 aa8.62□□□□□ -1.03
CTSA-216ENST00000607212 ERG28Q9UKR5 140 aa8.62□□□□□ -1.03
CTSA-216ENST00000607212 LINC01545Q5VT33 79 aa8.61□□□□□ -1.03
CTSA-216ENST00000607212 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
CTSA-216ENST00000607212 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
CTSA-216ENST00000607212 VPREB1P12018 145 aa8.6□□□□□ -1.03
CTSA-216ENST00000607212 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
CTSA-216ENST00000607212 C3orf22Q8N5N4 141 aa8.59□□□□□ -1.03
CTSA-216ENST00000607212 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
CTSA-216ENST00000607212 PPDPFQ9H3Y8 114 aa8.58□□□□□ -1.04
CTSA-216ENST00000607212 M0R378 163 aa8.57□□□□□ -1.04
CTSA-216ENST00000607212 HBDP02042 147 aa8.57□□□□□ -1.04
CTSA-216ENST00000607212 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
CTSA-216ENST00000607212 COX17Q14061 63 aa8.56□□□□□ -1.04
CTSA-216ENST00000607212 TMEM170BQ5T4T1 132 aa8.56□□□□□ -1.04
CTSA-216ENST00000607212 PLEKHB2Q96CS7 222 aa8.56□□□□□ -1.04
CTSA-216ENST00000607212 IGLV5-39A0A0G2JS06 123 aa8.55□□□□□ -1.04
CTSA-216ENST00000607212 LINC00158P58513 81 aa8.55□□□□□ -1.04
CTSA-216ENST00000607212 LCE2AQ5TA79 106 aaPredicted RBP8.55□□□□□ -1.04
CTSA-216ENST00000607212 LINC00337Q8N6G1 96 aa8.55□□□□□ -1.04
CTSA-216ENST00000607212 PMCHL2Q9BQD1 86 aa8.55□□□□□ -1.04
CTSA-216ENST00000607212 FAT4Q6V0I7 4981 aa8.55□□□□□ -1.04
CTSA-216ENST00000607212 A0A0U1RRA0 63 aa8.54□□□□□ -1.04
CTSA-216ENST00000607212 H0Y8G0 127 aa8.54□□□□□ -1.04
CTSA-216ENST00000607212 SPAG11AQ6PDA7 123 aa8.54□□□□□ -1.04
CTSA-216ENST00000607212 ZNF706Q9Y5V0 76 aaPredicted RBP8.54□□□□□ -1.04
CTSA-216ENST00000607212 HSBP1L1C9JCN9 74 aa8.53□□□□□ -1.04
CTSA-216ENST00000607212 BATFQ16520 125 aa8.53□□□□□ -1.04
CTSA-216ENST00000607212 COL5A1-AS1Q5SY13 56 aa8.53□□□□□ -1.04
CTSA-216ENST00000607212 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
CTSA-216ENST00000607212 IFI27L1Q96BM0 104 aa8.53□□□□□ -1.04
CTSA-216ENST00000607212 C11orf86A6NJI1 115 aa8.51□□□□□ -1.05
CTSA-216ENST00000607212 SLC25A34Q6PIV7 304 aa8.51□□□□□ -1.05
CTSA-216ENST00000607212 Q8NDZ9 215 aa8.51□□□□□ -1.05
CTSA-216ENST00000607212 SPRR4Q96PI1 79 aa8.51□□□□□ -1.05
CTSA-216ENST00000607212 COX8AP10176 69 aa8.5□□□□□ -1.05
CTSA-216ENST00000607212 HINT1P49773 126 aaPredicted RBP8.5□□□□□ -1.05
CTSA-216ENST00000607212 ANKRD39Q53RE8 183 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms