RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
TUBE1-208ENST00000604743 LINC00158P58513 81 aa8.76□□□□□ -1.01
TUBE1-208ENST00000604743 SND1-IT1Q9HBX3 110 aa8.76□□□□□ -1.01
TUBE1-208ENST00000604743 H0Y9J4 135 aa8.75□□□□□ -1.01
TUBE1-208ENST00000604743 COX17Q14061 63 aa8.75□□□□□ -1.01
TUBE1-208ENST00000604743 SFTA2Q6UW10 78 aa8.75□□□□□ -1.01
TUBE1-208ENST00000604743 PMCHL2Q9BQD1 86 aa8.75□□□□□ -1.01
TUBE1-208ENST00000604743 S100A2P29034 98 aa8.74□□□□□ -1.01
TUBE1-208ENST00000604743 KRTAP10-8P60410 259 aa8.74□□□□□ -1.01
TUBE1-208ENST00000604743 HMCN2Q8NDA2 5059 aa8.74□□□□□ -1.01
TUBE1-208ENST00000604743 IGLV5-37A0A075B6J1 123 aa8.73□□□□□ -1.01
TUBE1-208ENST00000604743 MEIG1Q5JSS6 88 aa8.72□□□□□ -1.01
TUBE1-208ENST00000604743 MAP1LC3CQ9BXW4 147 aa8.72□□□□□ -1.01
TUBE1-208ENST00000604743 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.02
TUBE1-208ENST00000604743 ZNF861PO60384 105 aa8.71□□□□□ -1.02
TUBE1-208ENST00000604743 DPM2O94777 84 aa8.71□□□□□ -1.02
TUBE1-208ENST00000604743 IGKV2D-28P01615 120 aa8.71□□□□□ -1.02
TUBE1-208ENST00000604743 SMIM13P0DJ93 91 aa8.71□□□□□ -1.02
TUBE1-208ENST00000604743 PLNP26678 52 aa8.71□□□□□ -1.02
TUBE1-208ENST00000604743 RPL24P83731 157 aaKnown RBP8.71□□□□□ -1.02
TUBE1-208ENST00000604743 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
TUBE1-208ENST00000604743 BCE1O60756 84 aa8.7□□□□□ -1.02
TUBE1-208ENST00000604743 IGKCP01834 107 aa8.7□□□□□ -1.02
TUBE1-208ENST00000604743 VPREB1P12018 145 aa8.7□□□□□ -1.02
TUBE1-208ENST00000604743 PRR26Q8N8Z3 221 aa8.7□□□□□ -1.02
TUBE1-208ENST00000604743 LEPROTO15243 131 aa8.69□□□□□ -1.02
TUBE1-208ENST00000604743 TSPEAR-AS2P59090 65 aa8.69□□□□□ -1.02
TUBE1-208ENST00000604743 Q8NDZ9 215 aa8.69□□□□□ -1.02
TUBE1-208ENST00000604743 MYMXA0A1B0GTQ4 84 aa8.68□□□□□ -1.02
TUBE1-208ENST00000604743 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
TUBE1-208ENST00000604743 AKR1D1P51857 326 aa8.68□□□□□ -1.02
TUBE1-208ENST00000604743 HERVK_113P61574 105 aa8.68□□□□□ -1.02
TUBE1-208ENST00000604743 HERV-K104P63124 156 aa8.68□□□□□ -1.02
TUBE1-208ENST00000604743 PLEKHB2Q96CS7 222 aa8.68□□□□□ -1.02
TUBE1-208ENST00000604743 C20orf202A1L168 122 aa8.67□□□□□ -1.02
TUBE1-208ENST00000604743 UBE2AP49459 152 aa8.67□□□□□ -1.02
TUBE1-208ENST00000604743 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
TUBE1-208ENST00000604743 IGLV1-50A0A075B6I6 118 aa8.66□□□□□ -1.02
TUBE1-208ENST00000604743 J3QQQ9 107 aa8.66□□□□□ -1.02
TUBE1-208ENST00000604743 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
TUBE1-208ENST00000604743 HIST3H2BBQ8N257 126 aa8.66□□□□□ -1.02
TUBE1-208ENST00000604743 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
TUBE1-208ENST00000604743 TMEM238C9JI98 176 aa8.65□□□□□ -1.02
TUBE1-208ENST00000604743 LGALS3P17931 250 aaKnown RBP8.65□□□□□ -1.02
TUBE1-208ENST00000604743 SNRPEP62304 92 aaKnown RBP8.65□□□□□ -1.02
TUBE1-208ENST00000604743 PET117Q6UWS5 81 aa8.65□□□□□ -1.02
TUBE1-208ENST00000604743 BOD1L2Q8IYS8 172 aa8.65□□□□□ -1.02
TUBE1-208ENST00000604743 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.02
TUBE1-208ENST00000604743 C5orf52A6NGY3 159 aa8.64□□□□□ -1.03
TUBE1-208ENST00000604743 SYS1-DBNDD2H3BUS1 97 aa8.64□□□□□ -1.03
TUBE1-208ENST00000604743 KRTDAPP60985 99 aa8.64□□□□□ -1.03
TUBE1-208ENST00000604743 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
TUBE1-208ENST00000604743 NCR3O14931 201 aa8.63□□□□□ -1.03
TUBE1-208ENST00000604743 DAND5Q8N907 189 aa8.63□□□□□ -1.03
TUBE1-208ENST00000604743 HIST1H2BLQ99880 126 aa8.63□□□□□ -1.03
TUBE1-208ENST00000604743 TMEM126AQ9H061 195 aa8.63□□□□□ -1.03
TUBE1-208ENST00000604743 M0R378 163 aa8.62□□□□□ -1.03
TUBE1-208ENST00000604743 PRLHP81277 87 aa8.62□□□□□ -1.03
TUBE1-208ENST00000604743 NMUP48645 174 aa8.61□□□□□ -1.03
TUBE1-208ENST00000604743 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
TUBE1-208ENST00000604743 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
TUBE1-208ENST00000604743 E9PLD3 99 aa8.59□□□□□ -1.03
TUBE1-208ENST00000604743 RPL13AP40429 203 aaKnown RBP8.59□□□□□ -1.03
TUBE1-208ENST00000604743 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
TUBE1-208ENST00000604743 ANAPC11Q9NYG5 84 aa8.59□□□□□ -1.03
TUBE1-208ENST00000604743 A0A0J9YXY3 114 aa8.57□□□□□ -1.04
TUBE1-208ENST00000604743 NPC2P61916 151 aa8.57□□□□□ -1.04
TUBE1-208ENST00000604743 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
TUBE1-208ENST00000604743 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
TUBE1-208ENST00000604743 A0A087X002 238 aa8.56□□□□□ -1.04
TUBE1-208ENST00000604743 IGKV2D-26A0A0A0MRZ7 120 aa8.55□□□□□ -1.04
TUBE1-208ENST00000604743 CRYGAP11844 174 aa8.55□□□□□ -1.04
TUBE1-208ENST00000604743 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
TUBE1-208ENST00000604743 TRBV10-3A0A0K0K1G6 114 aa8.54□□□□□ -1.04
TUBE1-208ENST00000604743 PRYO14603 147 aa8.54□□□□□ -1.04
TUBE1-208ENST00000604743 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
TUBE1-208ENST00000604743 LOC107984156A0A0G2JMH3 177 aa8.53□□□□□ -1.04
TUBE1-208ENST00000604743 HSBP1L1C9JCN9 74 aa8.53□□□□□ -1.04
TUBE1-208ENST00000604743 SCGB1D1O95968 90 aa8.53□□□□□ -1.04
TUBE1-208ENST00000604743 ARL17AQ8IVW1 177 aa8.53□□□□□ -1.04
TUBE1-208ENST00000604743 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
TUBE1-208ENST00000604743 DDTP30046 118 aa8.52□□□□□ -1.05
TUBE1-208ENST00000604743 S100A12P80511 92 aa8.52□□□□□ -1.05
TUBE1-208ENST00000604743 TTTY13Q9BZ97 58 aa8.52□□□□□ -1.05
TUBE1-208ENST00000604743 KCNQ1DNQ9H478 68 aa8.52□□□□□ -1.05
TUBE1-208ENST00000604743 ETDCA0A1B0GVM5 59 aa8.51□□□□□ -1.05
TUBE1-208ENST00000604743 ZNF815PA8K554 130 aa8.51□□□□□ -1.05
TUBE1-208ENST00000604743 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-208ENST00000604743 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
TUBE1-208ENST00000604743 LRP2P98164 4655 aa8.5□□□□□ -1.05
TUBE1-208ENST00000604743 TRBV10-2A0A0K0K1G8 114 aa8.5□□□□□ -1.05
TUBE1-208ENST00000604743 TSPAN13O95857 204 aa8.5□□□□□ -1.05
TUBE1-208ENST00000604743 S100A7L2Q5SY68 101 aa8.5□□□□□ -1.05
TUBE1-208ENST00000604743 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
TUBE1-208ENST00000604743 SPANXB1Q9NS25 103 aaPredicted RBP8.5□□□□□ -1.05
TUBE1-208ENST00000604743 NDUFC2O95298 119 aa8.49□□□□□ -1.05
TUBE1-208ENST00000604743 SPRR1AP35321 89 aa8.49□□□□□ -1.05
TUBE1-208ENST00000604743 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
TUBE1-208ENST00000604743 LINC00337Q8N6G1 96 aa8.49□□□□□ -1.05
TUBE1-208ENST00000604743 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms