RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 A0A1B0GWB2 263 aa8.26□□□□□ -1.09
HERPUD2-207ENST00000603731 EIF4EBP3O60516 100 aaPredicted RBP8.26□□□□□ -1.09
HERPUD2-207ENST00000603731 SLPIP03973 132 aa8.26□□□□□ -1.09
HERPUD2-207ENST00000603731 LOC107984156A0A0G2JMH3 177 aa8.25□□□□□ -1.09
HERPUD2-207ENST00000603731 RPL18AQ02543 176 aaKnown RBP8.25□□□□□ -1.09
HERPUD2-207ENST00000603731 GAGE2EQ4V326 116 aa8.25□□□□□ -1.09
HERPUD2-207ENST00000603731 ARL17AQ8IVW1 177 aa8.25□□□□□ -1.09
HERPUD2-207ENST00000603731 KRTAP4-5Q9BYR2 181 aa8.25□□□□□ -1.09
HERPUD2-207ENST00000603731 GAGE2DQ9UEU5 116 aa8.25□□□□□ -1.09
HERPUD2-207ENST00000603731 PRO1854Q9UHT4 67 aa8.25□□□□□ -1.09
HERPUD2-207ENST00000603731 A0A087WTM6 91 aa8.24□□□□□ -1.09
HERPUD2-207ENST00000603731 LOC107984640A0A0U1RRK4 108 aa8.24□□□□□ -1.09
HERPUD2-207ENST00000603731 TAX1BP3O14907 124 aa8.24□□□□□ -1.09
HERPUD2-207ENST00000603731 TLX1NBP0CAT3 122 aa8.24□□□□□ -1.09
HERPUD2-207ENST00000603731 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
HERPUD2-207ENST00000603731 Q8N814 137 aa8.23□□□□□ -1.09
HERPUD2-207ENST00000603731 XAGE1AQ9HD64 81 aa8.23□□□□□ -1.09
HERPUD2-207ENST00000603731 PKIGQ9Y2B9 76 aa8.23□□□□□ -1.09
HERPUD2-207ENST00000603731 TRAV13-2A0A0B4J235 113 aa8.22□□□□□ -1.09
HERPUD2-207ENST00000603731 C9orf118A6NHY6 69 aa8.22□□□□□ -1.09
HERPUD2-207ENST00000603731 NDUFC2O95298 119 aa8.22□□□□□ -1.09
HERPUD2-207ENST00000603731 Q1RN00 199 aa8.22□□□□□ -1.09
HERPUD2-207ENST00000603731 Q6ZRP5 223 aa8.22□□□□□ -1.09
HERPUD2-207ENST00000603731 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
HERPUD2-207ENST00000603731 PKHD1P08F94 4074 aa8.21□□□□□ -1.09
HERPUD2-207ENST00000603731 H7C2G1 150 aa8.21□□□□□ -1.1
HERPUD2-207ENST00000603731 RPL13AP40429 203 aaKnown RBP8.21□□□□□ -1.1
HERPUD2-207ENST00000603731 GAGE2BQ13066 116 aa8.21□□□□□ -1.1
HERPUD2-207ENST00000603731 H3BUT2 72 aa8.2□□□□□ -1.1
HERPUD2-207ENST00000603731 OR13C6PQ8NH95 151 aa8.2□□□□□ -1.1
HERPUD2-207ENST00000603731 TSPAN13O95857 204 aa8.19□□□□□ -1.1
HERPUD2-207ENST00000603731 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
HERPUD2-207ENST00000603731 IGKV2-28A0A075B6P5 120 aa8.18□□□□□ -1.1
HERPUD2-207ENST00000603731 A0A1B0GV90 55 aa8.18□□□□□ -1.1
HERPUD2-207ENST00000603731 NCR3O14931 201 aa8.18□□□□□ -1.1
HERPUD2-207ENST00000603731 IGKV2D-28P01615 120 aa8.18□□□□□ -1.1
HERPUD2-207ENST00000603731 PSMB2P49721 201 aa8.18□□□□□ -1.1
HERPUD2-207ENST00000603731 C9orf163Q8N9P6 203 aa8.18□□□□□ -1.1
HERPUD2-207ENST00000603731 DNAH6Q9C0G6 4158 aa8.18□□□□□ -1.1
HERPUD2-207ENST00000603731 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
HERPUD2-207ENST00000603731 TNP2Q05952 138 aa8.17□□□□□ -1.1
HERPUD2-207ENST00000603731 S100A7L2Q5SY68 101 aa8.17□□□□□ -1.1
HERPUD2-207ENST00000603731 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
HERPUD2-207ENST00000603731 TRBV10-2A0A0K0K1G8 114 aa8.16□□□□□ -1.1
HERPUD2-207ENST00000603731 RTL8CO15255 209 aa8.16□□□□□ -1.1
HERPUD2-207ENST00000603731 C9orf129Q5T035 196 aaKnown RBP8.16□□□□□ -1.1
HERPUD2-207ENST00000603731 LYRM7Q5U5X0 104 aa8.16□□□□□ -1.1
HERPUD2-207ENST00000603731 DYNC1H1Q14204 4646 aaKnown RBP8.15□□□□□ -1.1
HERPUD2-207ENST00000603731 A0A1W2PPM0 123 aa8.15□□□□□ -1.1
HERPUD2-207ENST00000603731 C16orf90A8MZG2 172 aa8.15□□□□□ -1.1
HERPUD2-207ENST00000603731 SCGB1C2P0DMR2 95 aa8.15□□□□□ -1.1
HERPUD2-207ENST00000603731 VPREB1P12018 145 aa8.15□□□□□ -1.1
HERPUD2-207ENST00000603731 FABP2P12104 132 aa8.15□□□□□ -1.1
HERPUD2-207ENST00000603731 VAMP3Q15836 100 aa8.15□□□□□ -1.1
HERPUD2-207ENST00000603731 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
HERPUD2-207ENST00000603731 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.1
HERPUD2-207ENST00000603731 A0A096LNI7 61 aa8.14□□□□□ -1.11
HERPUD2-207ENST00000603731 IGLV5-52A0A0A0MRZ9 124 aa8.14□□□□□ -1.11
HERPUD2-207ENST00000603731 IGKV2-24A0A0C4DH68 120 aa8.14□□□□□ -1.11
HERPUD2-207ENST00000603731 M0R378 163 aa8.14□□□□□ -1.11
HERPUD2-207ENST00000603731 COX6CP09669 75 aa8.14□□□□□ -1.11
HERPUD2-207ENST00000603731 Q8NDZ9 215 aa8.14□□□□□ -1.11
HERPUD2-207ENST00000603731 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
HERPUD2-207ENST00000603731 UBR4Q5T4S7 5183 aa8.13□□□□□ -1.11
HERPUD2-207ENST00000603731 LINC01620Q4KN68 170 aa8.12□□□□□ -1.11
HERPUD2-207ENST00000603731 LINC00474Q9P2X8 69 aa8.12□□□□□ -1.11
HERPUD2-207ENST00000603731 DNAH11Q96DT5 4516 aa8.12□□□□□ -1.11
HERPUD2-207ENST00000603731 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
HERPUD2-207ENST00000603731 SDIM1Q6ZPB5 146 aa8.11□□□□□ -1.11
HERPUD2-207ENST00000603731 SMIM11BQ8TCY0 68 aa8.11□□□□□ -1.11
HERPUD2-207ENST00000603731 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
HERPUD2-207ENST00000603731 SPCS1Q9Y6A9 102 aa8.11□□□□□ -1.11
HERPUD2-207ENST00000603731 FAT2Q9NYQ8 4349 aa8.1□□□□□ -1.11
HERPUD2-207ENST00000603731 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
HERPUD2-207ENST00000603731 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
HERPUD2-207ENST00000603731 TRIAP1O43715 76 aa8.1□□□□□ -1.11
HERPUD2-207ENST00000603731 FUSP35637 526 aaKnown RBP eCLIP8.1□□□□□ -1.11
HERPUD2-207ENST00000603731 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
HERPUD2-207ENST00000603731 GTF2H5Q6ZYL4 71 aa8.1□□□□□ -1.11
HERPUD2-207ENST00000603731 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
HERPUD2-207ENST00000603731 DPH3Q96FX2 82 aa8.1□□□□□ -1.11
HERPUD2-207ENST00000603731 TRBV10-3A0A0K0K1G6 114 aa8.09□□□□□ -1.11
HERPUD2-207ENST00000603731 GAGE10A6NGK3 116 aa8.09□□□□□ -1.11
HERPUD2-207ENST00000603731 CHTF8P0CG12 524 aa8.09□□□□□ -1.11
HERPUD2-207ENST00000603731 HSPG2P98160 4391 aa8.09□□□□□ -1.11
HERPUD2-207ENST00000603731 DNAH2Q9P225 4427 aa8.09□□□□□ -1.12
HERPUD2-207ENST00000603731 IGLV6-57P01721 117 aa8.08□□□□□ -1.12
HERPUD2-207ENST00000603731 LINC00336Q6ZUF6 198 aa8.08□□□□□ -1.12
HERPUD2-207ENST00000603731 C22orf24Q9Y442 160 aa8.08□□□□□ -1.12
HERPUD2-207ENST00000603731 TRBV20-1A0A075B6N2 111 aa8.07□□□□□ -1.12
HERPUD2-207ENST00000603731 K7EP34 96 aa8.07□□□□□ -1.12
HERPUD2-207ENST00000603731 C7orf33Q8WU49 177 aa8.07□□□□□ -1.12
HERPUD2-207ENST00000603731 TRAV23DV6A0A075B6W5 121 aa8.06□□□□□ -1.12
HERPUD2-207ENST00000603731 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
HERPUD2-207ENST00000603731 M0QXV9 152 aa8.06□□□□□ -1.12
HERPUD2-207ENST00000603731 MRPL55Q7Z7F7 128 aaKnown RBP8.06□□□□□ -1.12
HERPUD2-207ENST00000603731 DNAH17Q9UFH2 4485 aa8.05□□□□□ -1.12
HERPUD2-207ENST00000603731 H0YGX0 51 aa8.05□□□□□ -1.12
HERPUD2-207ENST00000603731 ATXN8Q156A1 80 aa8.05□□□□□ -1.12
HERPUD2-207ENST00000603731 DIRC1Q969H9 104 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms