RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 CHCHD10Q8WYQ3 142 aaPredicted RBP5.28□□□□□ -1.56
HCG18-244ENST00000602516 DNAJC9-AS1A6NH13 148 aa5.28□□□□□ -1.56
HCG18-244ENST00000602516 DEFB114Q30KQ6 69 aa5.28□□□□□ -1.56
HCG18-244ENST00000602516 TRAV10A0A0B4J240 114 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 C3orf84H3BNL1 204 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 KRTAP1-1Q07627 177 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 OBSCN-AS1Q96MR7 158 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 CCDC168Q8NDH2 2452 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 CUBNO60494 3623 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 OTOGQ6ZRI0 2925 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 ERC2-IT1O76042 136 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 TSHBP01222 138 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 CREBBPQ92793 2442 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 MYO9AB2RTY4 2548 aa5.27□□□□□ -1.57
HCG18-244ENST00000602516 LINC00467Q9BRT7 94 aa5.26□□□□□ -1.57
HCG18-244ENST00000602516 SORL1Q92673 2214 aa5.26□□□□□ -1.57
HCG18-244ENST00000602516 FAM74A4Q5TZK3 123 aa5.26□□□□□ -1.57
HCG18-244ENST00000602516 TMEM254Q8TBM7 123 aa5.26□□□□□ -1.57
HCG18-244ENST00000602516 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
HCG18-244ENST00000602516 ITPR3Q14573 2671 aa5.26□□□□□ -1.57
HCG18-244ENST00000602516 CHKB-CPT1BH3BT56 60 aa5.25□□□□□ -1.57
HCG18-244ENST00000602516 IGLV4-69A0A075B6H9 119 aa5.25□□□□□ -1.57
HCG18-244ENST00000602516 RPL39P62891 51 aaKnown RBP5.25□□□□□ -1.57
HCG18-244ENST00000602516 MOBPQ13875 183 aa5.25□□□□□ -1.57
HCG18-244ENST00000602516 C1orf64Q8NEQ6 169 aa5.25□□□□□ -1.57
HCG18-244ENST00000602516 CELA1Q9UNI1 258 aa5.25□□□□□ -1.57
HCG18-244ENST00000602516 ANK3Q12955 4377 aaKnown RBP5.24□□□□□ -1.57
HCG18-244ENST00000602516 SCXQ7RTU7 201 aa5.24□□□□□ -1.57
HCG18-244ENST00000602516 PSCAO43653 123 aa5.24□□□□□ -1.57
HCG18-244ENST00000602516 C14orf132Q9NPU4 83 aa5.24□□□□□ -1.57
HCG18-244ENST00000602516 C9orf116Q5BN46 136 aaPredicted RBP5.23□□□□□ -1.57
HCG18-244ENST00000602516 CYP4F30PQ9H0H9 118 aa5.23□□□□□ -1.57
HCG18-244ENST00000602516 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
HCG18-244ENST00000602516 ODF3L2Q3SX64 289 aa5.23□□□□□ -1.57
HCG18-244ENST00000602516 C20orf203Q8NBC4 194 aa5.23□□□□□ -1.57
HCG18-244ENST00000602516 LEPROTO15243 131 aa5.22□□□□□ -1.57
HCG18-244ENST00000602516 C9orf129Q5T035 196 aaKnown RBP5.22□□□□□ -1.57
HCG18-244ENST00000602516 LINC01006Q8NI28 216 aa5.22□□□□□ -1.57
HCG18-244ENST00000602516 DEFB104AQ8WTQ1 72 aa5.22□□□□□ -1.57
HCG18-244ENST00000602516 INSP01308 110 aa5.22□□□□□ -1.57
HCG18-244ENST00000602516 HTN1P15515 57 aa5.22□□□□□ -1.57
HCG18-244ENST00000602516 SND1-IT1Q9HBX3 110 aa5.22□□□□□ -1.57
HCG18-244ENST00000602516 FAM218AQ96MZ4 157 aa5.22□□□□□ -1.57
HCG18-244ENST00000602516 LITAFQ99732 161 aa5.22□□□□□ -1.57
HCG18-244ENST00000602516 PROK1P58294 105 aa5.21□□□□□ -1.58
HCG18-244ENST00000602516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.21□□□□□ -1.58
HCG18-244ENST00000602516 HIVEP1P15822 2718 aa5.21□□□□□ -1.58
HCG18-244ENST00000602516 NANOS2P60321 138 aaKnown RBP5.21□□□□□ -1.58
HCG18-244ENST00000602516 Q6ZSN1 163 aa5.21□□□□□ -1.58
HCG18-244ENST00000602516 F8P00451 2351 aa5.2□□□□□ -1.58
HCG18-244ENST00000602516 FLNAP21333 2647 aaKnown RBP5.2□□□□□ -1.58
HCG18-244ENST00000602516 FAM104AQ969W3 186 aa5.2□□□□□ -1.58
HCG18-244ENST00000602516 TRBV6-8A0A0A6YYG3 113 aa5.2□□□□□ -1.58
HCG18-244ENST00000602516 IGHV3-73A0A0B4J1V6 119 aa5.2□□□□□ -1.58
HCG18-244ENST00000602516 IGHV3-53P01767 116 aa5.2□□□□□ -1.58
HCG18-244ENST00000602516 IGLV4-3A0A075B6K6 122 aa5.19□□□□□ -1.58
HCG18-244ENST00000602516 NOTCH2NLQ7Z3S9 236 aa5.19□□□□□ -1.58
HCG18-244ENST00000602516 TLN2Q9Y4G6 2542 aa5.19□□□□□ -1.58
HCG18-244ENST00000602516 A0A0J9YXY3 114 aa5.19□□□□□ -1.58
HCG18-244ENST00000602516 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
HCG18-244ENST00000602516 CMC4P56277 68 aaPredicted RBP5.18□□□□□ -1.58
HCG18-244ENST00000602516 SONP18583 2426 aaKnown RBP5.18□□□□□ -1.58
HCG18-244ENST00000602516 LINC00476Q8WZB0 136 aa5.18□□□□□ -1.58
HCG18-244ENST00000602516 SMR3AQ99954 134 aa5.18□□□□□ -1.58
HCG18-244ENST00000602516 CHCHD7Q9BUK0 85 aa5.18□□□□□ -1.58
HCG18-244ENST00000602516 NF1P21359 2839 aa5.18□□□□□ -1.58
HCG18-244ENST00000602516 LY6G6DO95868 133 aa5.18□□□□□ -1.58
HCG18-244ENST00000602516 IGLV1-51P01701 117 aa5.18□□□□□ -1.58
HCG18-244ENST00000602516 NREPQ16612 68 aa5.18□□□□□ -1.58
HCG18-244ENST00000602516 LIMD2Q9BT23 127 aa5.18□□□□□ -1.58
HCG18-244ENST00000602516 CDC42SE2Q9NRR3 84 aa5.18□□□□□ -1.58
HCG18-244ENST00000602516 ACANP16112 2415 aa5.17□□□□□ -1.58
HCG18-244ENST00000602516 GIG44P09565 113 aaPredicted RBP5.17□□□□□ -1.58
HCG18-244ENST00000602516 ZNF625Q96I27 306 aaPredicted RBP5.17□□□□□ -1.58
HCG18-244ENST00000602516 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
HCG18-244ENST00000602516 RPL36AP83881 106 aaKnown RBP5.16□□□□□ -1.58
HCG18-244ENST00000602516 Q8N9P0 234 aaPredicted RBP5.15□□□□□ -1.58
HCG18-244ENST00000602516 TEP1Q99973 2627 aaKnown RBP5.15□□□□□ -1.58
HCG18-244ENST00000602516 WNK1Q9H4A3 2382 aa5.15□□□□□ -1.59
HCG18-244ENST00000602516 A6NED7 52 aa5.15□□□□□ -1.59
HCG18-244ENST00000602516 INAFM1C9JVW0 142 aa5.15□□□□□ -1.59
HCG18-244ENST00000602516 MIAQ16674 131 aa5.15□□□□□ -1.59
HCG18-244ENST00000602516 RNASE13Q5GAN3 156 aaKnown RBP5.15□□□□□ -1.59
HCG18-244ENST00000602516 Q8N814 137 aa5.15□□□□□ -1.59
HCG18-244ENST00000602516 CSNK1G2-AS1Q8NCQ2 148 aa5.15□□□□□ -1.59
HCG18-244ENST00000602516 IGHV3OR16-12A0A075B7B8 117 aa5.14□□□□□ -1.59
HCG18-244ENST00000602516 TRBV10-1A0A0K0K1A3 114 aa5.14□□□□□ -1.59
HCG18-244ENST00000602516 ASB16-AS1Q495Z4 193 aa5.14□□□□□ -1.59
HCG18-244ENST00000602516 TRGV1A0A0A0MS02 117 aa5.14□□□□□ -1.59
HCG18-244ENST00000602516 Q6ZTI0 123 aa5.14□□□□□ -1.59
HCG18-244ENST00000602516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.14□□□□□ -1.59
HCG18-244ENST00000602516 IGKV2-29A2NJV5 120 aaPredicted RBP5.14□□□□□ -1.59
HCG18-244ENST00000602516 KRTAP10-3P60369 221 aa5.14□□□□□ -1.59
HCG18-244ENST00000602516 RPL36ALQ969Q0 106 aaKnown RBP5.14□□□□□ -1.59
HCG18-244ENST00000602516 UBL5Q9BZL1 73 aa5.14□□□□□ -1.59
HCG18-244ENST00000602516 IGHV3-38A0A0C4DH36 116 aa5.13□□□□□ -1.59
HCG18-244ENST00000602516 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
HCG18-244ENST00000602516 Q8N3U1 123 aa5.13□□□□□ -1.59
HCG18-244ENST00000602516 C16orf74Q96GX8 76 aa5.13□□□□□ -1.59
HCG18-244ENST00000602516 WFDC10AQ9H1F0 79 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms